prot_Ecto-sp13_S_contig5903.16429.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5903.16429.1
Unique Nameprot_Ecto-sp13_S_contig5903.16429.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length242
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5903.16429.1 vs. uniprot
Match: D7FYT2_ECTSI (DUF3752 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT2_ECTSI)

HSP 1 Score: 432 bits (1111), Expect = 4.970e-149
Identity = 236/241 (97.93%), Postives = 239/241 (99.17%), Query Frame = 0 
Query:    1 DGPAPRRAPIGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDEDHFGPSVAGKEKRVASERADPNRAKRQKRQELKRAAEWENATGVITGGQAALDKAEAEVGREEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAPKAPKSKAEMEAEAAAEELMAKHREARGASLVERHASDVSKAKKAAGGRDGGKKTFSWSREDDFEQRKKFTPQMYEELVQKSQELDSKFSRSISRNFL 241
            DGPAPRRAPIGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDED FGPS+AGKEKRVASERADPNRAKRQKRQELKRAAEWENATGVITGGQAALDKAEAEVGREEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAPKAPKSKAEMEAEAAAEELMAKHREARGASLVERHASDVSKAKKAAGG DGGKK+FSWSRE+DFEQRKKFTPQMYEELVQKSQELDSKFSRSISRNFL
Sbjct:  221 DGPAPRRAPIGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDEDQFGPSIAGKEKRVASERADPNRAKRQKRQELKRAAEWENATGVITGGQAALDKAEAEVGREEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAPKAPKSKAEMEAEAAAEELMAKHREARGASLVERHASDVSKAKKAAGGGDGGKKSFSWSREEDFEQRKKFTPQMYEELVQKSQELDSKFSRSISRNFL 461
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BLAST of mRNA_Ecto-sp13_S_contig5903.16429.1 vs. uniprot
Match: A0A835YLN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN1_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 5.250e-17
Identity = 76/171 (44.44%), Postives = 92/171 (53.80%), Query Frame = 0 
Query:   10 IGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDEDHFGPSVAGKEKRVASERADPNRAKRQKRQELKRAAEWENATGVITGGQAALDKAEAEVGREEWMLVPPKSLGVLGAIKTL-QPTNRKFQTRSARGARADLHAPKA-PKSKAEMEAEAAAEELMAKHREARGASLVERH 178
            IGP  P  A+L QA Q +    +    SD  +D  GPS +   +R A  R  P                W   T     G AA     A   REEWM+VPPK+LG+LGA+KTL QPT+RKFQT S  GA      PKA PK+KA++E E AAEELMA+HR  RG SL + H
Sbjct:  382 IGPMRPPAALLEQAAQMSSALAKRPLDSDSSDDDVGPSTSHV-RRPARHR--PXXXXXXXXXXXXXXXXW---TKTPAAGTAA-----ASTVREEWMMVPPKNLGILGALKTLAQPTSRKFQTGSKAGA-----VPKAVPKTKAQLEEERAAEELMAQHRAMRGPSLADMH 536
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BLAST of mRNA_Ecto-sp13_S_contig5903.16429.1 vs. uniprot
Match: A0A7S3YEG5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEG5_HETAK)

HSP 1 Score: 65.9 bits (159), Expect = 2.740e-9
Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = 0 
Query:  102 REEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHA-PKAPKSKAEMEAEAAAEELMAKHREARGASLVERHASD------VSKAKKAAGGRDGGKKTFSWSREDDF---EQRKKFTPQMYEELVQKSQELDSKFSRSISRNFL 241
            REEWM+ P ++  ++     L PTNR FQT+S RG  ++  A P  P SK +    A  EE++AKH+E RG SLVERH  +              G +   +K+ + S + DF      KK       EL++++  LDS+FSRS+S++FL
Sbjct:   88 REEWMMTPGEAKSLIPG--GLMPTNRTFQTKSLRGKNSEAAAGPALPVSKEQALENARVEEVLAKHKELRGDSLVERHQKEQXXXXXXXXXXXXKGPKVDPRKSKNISFDRDFLIEGASKKLDKSRAAELMKRAAGLDSRFSRSVSKSFL 235
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5903.16429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYT2_ECTSI4.970e-14997.93DUF3752 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YLN1_9STRA5.250e-1744.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3YEG5_HETAK2.740e-937.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..168
NoneNo IPR availablePANTHERPTHR46370FAMILY NOT NAMEDcoord: 5..241
IPR022226Protein of unknown function DUF3752PFAMPF12572DUF3752coord: 134..233
e-value: 4.3E-7
score: 30.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5903contigEcto-sp13_S_contig5903:2..2998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5903.16429.1mRNA_Ecto-sp13_S_contig5903.16429.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5903 2..2998 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5903.16429.1 ID=prot_Ecto-sp13_S_contig5903.16429.1|Name=mRNA_Ecto-sp13_S_contig5903.16429.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
DGPAPRRAPIGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDEDHFGPSVAG
KEKRVASERADPNRAKRQKRQELKRAAEWENATGVITGGQAALDKAEAEV
GREEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAPKAPKSK
AEMEAEAAAEELMAKHREARGASLVERHASDVSKAKKAAGGRDGGKKTFS
WSREDDFEQRKKFTPQMYEELVQKSQELDSKFSRSISRNFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022226DUF3752