mRNA_Ecto-sp13_S_contig5887.16400.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5887.16400.1 vs. uniprot
Match: D7FVR1_ECTSI (SSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR1_ECTSI) HSP 1 Score: 1031 bits (2666), Expect = 0.000e+0 Identity = 529/542 (97.60%), Postives = 537/542 (99.08%), Query Frame = 1
Query: 1 AVAGGSPACCLSWAATKLETDLIFAGVDDNDGSIKYLMTSQANFPINHPAWISTMEARGVTTEEGREAVALGWEAAMVDEMTPRFEGEAGSGFGEGETFEDVDLDFFVKRSGDDIIENGNSPEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTLVHTTDSPGDPRRRLVTTLVHAGPSVTVTSIAVASCFLVASAVNILTVRYFALHMGFQMLFHLVLLHLMLLPLMYWDSVRVAAKRSDMFLIKLSPQGILPEAEFACANNTQRFVEKFYAPLVRNKIFKTLVIVIAIAMTAALAWLGFSEIKLGVGLNTLAVEGSYQNSFLGVFETEFDASSVMLVTKEVDFGTYQETLLEMQDVVQDVEWVSDVSTIKDNSWLANSFSSLLTPTEEIIPADEFNERFAEWIQGQGVTSANNFYCAEGTDGPRVDCAEFDPDTTVIKASQQLLYVHDQTTRENNVKMFRDMREAVDSVDPDRDTFAYSDT 1626
AVAGGSPACCLSWAATKLETDLIFAGVDD+DGSIKYLMT+QANFPINHPAWISTMEARGVTTEEGREA+ALGWEAAMVD+MTPRFE E GSGFGEGETFEDVDLDFF KRSGDDIIENGN+PEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTLVHTTDSPGDPRRRLVTTLVHAGPSVTVTSIAVASCFLVASAVNILTVRYFALHMGFQMLFHLVLLHLMLLPLMYWDS+RVAA RSDMFLIKLSP+GILPEAEFACANNTQRFVEKFYAPLVRNKIFKTLVIVIAIAMTAALAWLGFSEIKLGVGLNTLAVEGSYQNSFL VFETEFDASSVMLVTKEVDFGTYQETLLEMQDVVQDVEWVSDVSTIKDNSWLA+SFSSLLTPTEEIIPADEFNERFAEWIQGQGVTSANNFYCAEGTDGPRVDCAEFDPDTTVIKASQQLLYVHDQTTRENNVKMFRDMREAVDSVDPDRDTFAYSDT
Sbjct: 331 AVAGGSPACCLSWAATKLETDLIFAGVDDSDGSIKYLMTTQANFPINHPAWISTMEARGVTTEEGREAIALGWEAAMVDDMTPRFEEETGSGFGEGETFEDVDLDFFAKRSGDDIIENGNTPEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTLVHTTDSPGDPRRRLVTTLVHAGPSVTVTSIAVASCFLVASAVNILTVRYFALHMGFQMLFHLVLLHLMLLPLMYWDSIRVAANRSDMFLIKLSPEGILPEAEFACANNTQRFVEKFYAPLVRNKIFKTLVIVIAIAMTAALAWLGFSEIKLGVGLNTLAVEGSYQNSFLSVFETEFDASSVMLVTKEVDFGTYQETLLEMQDVVQDVEWVSDVSTIKDNSWLADSFSSLLTPTEEIIPADEFNERFAEWIQGQGVTSANNFYCAEGTDGPRVDCAEFDPDTTVIKASQQLLYVHDQTTRENNVKMFRDMREAVDSVDPDRDTFAYSDT 872
BLAST of mRNA_Ecto-sp13_S_contig5887.16400.1 vs. uniprot
Match: A0A6H5KIK2_9PHAE (SSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIK2_9PHAE) HSP 1 Score: 409 bits (1051), Expect = 9.290e-135 Identity = 209/214 (97.66%), Postives = 212/214 (99.07%), Query Frame = 1
Query: 1 AVAGGSPACCLSWAATKLETDLIFAGVDDNDGSIKYLMTSQANFPINHPAWISTMEARGVTTEEGREAVALGWEAAMVDEMTPRFEGEAGSGFGEGETFEDVDLDFFVKRSGDDIIENGNSPEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTL 642
AVAGGSPACCLSWAATKLETDLIFAGVDDNDGSIKYLMTSQANFPINHPAWISTME RGVTTEEGREA+ALGWEAAMVD+MTPRFEGEAGSGFGEGETFE+VDLDFFVKRSGDDIIENGN PEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTL
Sbjct: 268 AVAGGSPACCLSWAATKLETDLIFAGVDDNDGSIKYLMTSQANFPINHPAWISTMEDRGVTTEEGREAIALGWEAAMVDDMTPRFEGEAGSGFGEGETFEEVDLDFFVKRSGDDIIENGNIPEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTL 481
BLAST of mRNA_Ecto-sp13_S_contig5887.16400.1 vs. uniprot
Match: UPI000D1C8382 (protein patched homolog 2-like isoform X1 n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C8382) HSP 1 Score: 206 bits (523), Expect = 2.080e-53 Identity = 166/573 (28.97%), Postives = 276/573 (48.17%), Query Frame = 1
Query: 13 GSPACCLSW----AATKLETDLIFAGVDDNDGSIKYLMTSQANFPINHPAWISTMEARGVTT--EEGREAVALGWEAAMVDEMTPRFEGEAGSGFGEGETFEDVDLDFFVKRSGDDIIENGNSPEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTLVHTTDSPG-------DPRRRLVTTLVHAGPSVTVTSIAVASCFLVASAVNILTVRYFALHMGFQMLFHLVLLHLMLLPLMYWDSVRVAAKRSDMFLIKLSPQGILPEAEFACANN---------------TQRFVEKFYAPLVRNKIFKTLVIVIAIAMTAALAWLGFSEIKLGVGLNTLAVEGSYQNSFLGVFETEFDASSVMLVTKEVDFGTYQETLLEMQDVVQD--VEWVSDVSTIKDNSWL-------ANSFSSLLTPTEEI-------IPADEFNERFAEWIQGQ-GVTSANNFYCAEGTDGPRVDC--AEFDPDTTVIKASQQLLYVHDQTTRENNVKMFRDMREAVDSV 1590
G+ CC++W + T + N IK L + NF HP W S + T+ E+ RE + WEA M++E+ P + + + FG+ + D+ L+F + RS +DII + N + I+++ + + I++ ++ ++K +P ++S L+L GM VV+L+ A GF +A+ I LTPL+ SVVPFL+LG+GIDD+ + + L + P P + T AGPSV +T+ +V + F ++S + VR+F MG H + + L+ +P+M D+ RV A D +L L E A+ R V K+YAPL N +FK +V+V+ A+ A +LGF +++ G+ L+ + ++GSYQN+F V E +F + + VT+++DF QE LL++ + +Q W + + S L ANS + T + IP D F++ W G+ S ++YC + T +DC F P+ V + H E N++M R R+ D +
Sbjct: 348 GTQPCCMTWFGAHSPTLTSLGSLKYDASGNITEIKGLRWAGNNFHQRHPVWESYISNLLGTSFQEKQREQLTKDWEAHMINELDPLRQHQPSTIFGDKNIYGDLQLEFNMWRSSEDIISDANKTPVWQIVLSGILVSIYSFLAFVNFK--DP----VHSFTWLALTGMVVVSLAVIAGFGFSAAIGIKLTPLAGSVVPFLTLGLGIDDVFVLVSVLRNYLKDPSLKDITSKVPEAEMRMTTALAGPSVVLTTFSVLASFFISSLSPMPIVRWFCWQMGITATLHTLGMLLIFIPIMAIDARRVKANVCDPYLWLLCGIRKKENLEGPLASKDSPGNFSGHVTGTSFVSRAVAKYYAPLFENNLFKVVVLVLFSALLAVTTYLGFEKVEHGLLLSDITLKGSYQNTFAVVTEGKFLSYQINYVTRDIDFARNQENLLKIYETMQSNLSYWTPPQPRVLEASVLGNIMVYTANSRPDIKTVPVNVSGIPLFTIPVDVFDQTQQAWSSTPIGIFSLPDYYCEDKTTKEHLDCFTTTFKPNLRVAATKTSIFIEHLGAETEPNLRMIRQTRKIADQM 914
BLAST of mRNA_Ecto-sp13_S_contig5887.16400.1 vs. uniprot
Match: F2TWB0_SALR5 (SSD domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TWB0_SALR5) HSP 1 Score: 200 bits (508), Expect = 2.460e-51 Identity = 160/549 (29.14%), Postives = 255/549 (46.45%), Query Frame = 1
Query: 19 PACCLSWAATKLETDLIFAGVDDNDGSIKYLMTSQANFPINH-PAWISTMEA---RGVTTEEGREAVALGWEAAMVDEMTPRFEGEAGSGFGEGETFEDVDLDFFVKRSGDDIIENGNSPEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTLVHTTDSPGDPRRRLVTTLV-HAGPSVTVTSIAVASCFLVASAVNILTVRYFALHMGFQMLFHLVLLHLMLLPLMYWDSVRVAAKRSDMFLIKLSPQGILPEAEFACANNTQR-----FVEKFYAPLVRNKIFKT---LVIVIAIAMTAALA-WLGFSEIKLGVGLNTLAVEGSYQNSFLGVFETEFDASSVMLVTKEVDFGTYQETLLEMQDVVQDVEWVSDVSTIKDNSWLANSFSSLLTPTEEIIPADEFNERFAEWIQGQGVTSANNFYCAEGTDGPRVDCAE----FDPD-------TTVIKASQQLLYVHDQTTRENNVKMFRDMREAVDSV 1590
PAC L+W+ TK T L++ V + S AN H P + MEA R T++ E + +E M+ + P ++ EAG+G+ E F +DF RS D+++ + L+I A G+V+ A ++ + ++YS L++ GM VV + A LG + TP+S SVVPFL+LGIG+DDM + + G ++T +V AGPSV TS FL+A A + V+ FA M ++ + +LL L+ +P MY D VRV A RSD+ GI C ++ +R +++F+ + + T ++++IA A LA W GF + G+ ++ +A EG+YQ F + E+EF S +VT+ DF Q+ +L +Q+ E VSDV I WL N +++P +EF FA W+ GV+ + C + + G DC + FD + + + Y+ D + R+ R +D V
Sbjct: 803 PACLLTWSGTKQPTQLVYGDVS---ATAVRASRSAANHWNEHLPLYRQRMEALLNRDDLTDKELERIHRTFELRMIAYLEPLYKAEAGTGYASNEPFASEHVDFQTGRSTSDVVDEAGEADIELLIAA--GVVLAAYIAFSIYNLWS----SVYSHAALAVWGMLVVGGAIFAALGLSLYFGVTFTPVSTSVVPFLALGIGVDDMFVLLRAYAREVKD-GSKAEHIMTRVVGEAGPSVLFTSFTNLVAFLIAFAAPVEVVQLFAYQMAINVVLNFLLLFLLFVPAMYLDCVRVLASRSDI--------GI------RCCHDDKRAREPSLLDRFFQGPYSDFLMATPTRVIVIIAFATWCGLAVWQGFFHTETGLRISDVAEEGTYQYDFASLLESEFQMYSGSVVTRSDDFPAAQQNILYALAALQEAESVSDVPAIGSLYWLHNFLEDATGNATQVLPEEEFYPAFASWLAAGGVSYLADLSCIDASTGMTADCFDIVGAFDDEPRAGSNPNITLSVVRGTFYLQDLAVNSDFTSAIRETRAQLDPV 1327
BLAST of mRNA_Ecto-sp13_S_contig5887.16400.1 vs. uniprot
Match: A0A5J4YRZ0_PORPP (Protein patched-like 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRZ0_PORPP) HSP 1 Score: 192 bits (487), Expect = 1.150e-48 Identity = 142/495 (28.69%), Postives = 248/495 (50.10%), Query Frame = 1
Query: 13 GSPACCLSWAATKLETDLIFAGVD-DNDGSIKYLMTSQANF---PINHPAWISTMEAR-GVTTEEGREAVALGWEAAMVDEMTPRFEGEAGSGFGEGETFEDVDLDFFVKRSGDDIIENGNSPEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTLVHTTDSPGDPRRRLVTTLVHAGPSVTVTSIAVASCFLVASAVNILTVRYFALHMGFQMLFHLVLLHLMLLPLMYWDSVRVAAKRSDMFL---IKLSPQGILPEAEFACAN--NTQRFVEKFYAP--LVRNKIFKTLVIVIAIAMTAALAWLGFSEIKLGVGLNTLAVEGSYQNSFLGVFETEFDASSVMLVTKEVDFGT--YQETLLEMQDVVQDVEWVSDVSTIKDNSWLANSFSSLLTPTEEII------PADE--FNERFAEWIQGQGVTSANNFYC 1431
G +CCLSW A ++ + + +N G+++Y+ ++ F N A+ + G TTE R+A+ L WE+ ++ P E + F G + D L+F+ +S DD+ E GN LI+ +Y M ++ ++S ++ +YSR++++ G+ VAL+T G +S ++ ++P+ +++ PFLSLG+G+DD+ + L+ + + P R+ + AGPSV +T+ A S F +AS+V I + F +G + F+L+ L L +P D +RV A+ D+FL +KL P+ I E E + + RF P L+R+ K V+ + +A + LG + G+ L+ +A+EGSYQ +++ + E F LVT+ V F Q +L+ Q ++ + SD +++ SW +NS +S L + PAD + E F +W Q G N+ +C
Sbjct: 409 GGASCCLSWNAFAVDFETFIGDLRYNNQGALEYVGFLRSGFIGANSNEEAFAMRVATLFGATTEAERQALVLDWESNVISYFLPMHERAQSTDFAPGRIYADSLLNFYTTKSSDDVAEEGNRVPVGLIVASYAVMTVYTSLSFLNYSRPVGWRNVVYSRLVVAWCGLVSVALATLCGFGVLSWANVAISPVGINLAPFLSLGVGLDDIFVVAGGLIESGNLQNTPEERMRAVMRAAGPSVMLTTFANMSAFFIASSVRIPALYSFCYQIGTTLGFNLIFLFLFFVPCCAADCLRVQARMQDLFLWSCVKLDPETIPDELEAKKTSPFSLGRFASDVLGPKILLRSVWSKLAVLGVTLAFLVPIIVLGALRSQSGLPLSEVALEGSYQAAYVTIQEQYFTGYVSWLVTENVTFQDPQVQTAMLQQQLAIEMSKHASDQPSLRQTSWFSNSTASFLGSVNLPMGMNVDTPADSNSYYESFFQWTQTAGTGFENDIWC 903
BLAST of mRNA_Ecto-sp13_S_contig5887.16400.1 vs. uniprot
Match: A0A7S0L2J5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L2J5_9EUKA) HSP 1 Score: 184 bits (468), Expect = 2.020e-46 Identity = 162/577 (28.08%), Postives = 272/577 (47.14%), Query Frame = 1
Query: 13 GSPACCLSWAATKLETDLIFAGVDDN--DGSIKYLMTSQANFPINHPAW----ISTMEARGVTTEEGREAVALGWEAAMVDEMTPRFEGEAGSGFGEGETFEDVD----LDFFVKRSGDDIIENGNSPEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTLVHTTDSPGDPRRRLVTTLVHAGPSVTVTSIAVASCFLVASAVNILTVRYFALHMGFQMLFHLVLLHLMLLPLMYWDSVRVAAKRSDMFLIKLSPQGILPEAEFACANNT-QRFVEKFYAPLVRNKIFKTLVIVIAIAMTAALAWLGFSEIKLGVGLNTLAVEGSYQNSFLGVFETEFD--ASSVMLVTKEVDFGT---------------------YQETL--LEMQDVVQDVEWVSDVSTIKDNSWLANSF--SSLLTP----------TEEIIPADEFNERFAEWIQGQGVTSANNFYCAEGTDGPRVDCAEFDPDTTV-IKASQQLLYVHDQTTRENNVKMFRDMREAVDSVDP 1596
G +CCL W+ TKL +L +G I NF W ++ + + +E +A+ +E +D + P +EGE T VD +DF S DDII++ + PE L+I YL ++I+ A+++ + +YSR L L G+FVVALST A G ++A L PLS ++VPFLSLGIG+DDM + I TLV DP +R+ T+ AGPSV +TS+ F VA+ I V F + M ++ + + L ++ +P+M +D+ RVA K++D+F + + E + + K P +R+ + K +++ + A+ LA L F+E+K G ++ +A+ GSYQ F+ + ET F ++S++ + + D+ T +++ L LE D+ Q V D++ + S N F SS+ P + P F F+ W G TS +N C + + V C +++ V + A+ +Y + ++ + + +D R+ VD++DP
Sbjct: 134 GGNSCCLLWSGTKLPDNLWLGAGSKTFANGGIPAHRVGINNFGQGSLIWENNLVTNYGLSAAPSRDEQEELAIQFERKWIDYIKPIWEGEQKCP--SSTTLNAVDCVTKIDFLFDDSVDDIIKDASKPEAILVITGYLVLIIYTALALCRFP-------CVYSRAGLGLMGIFVVALSTVAGFG-LTAFFEKLNPLSTNLVPFLSLGIGVDDMYVLIQTLVLQAVDSSDPEKRMEETMAVAGPSVFLTSLTNTCAFFVAALTPIPAVTQFVIQMALTVVTNFLSLMIIFVPMMAFDAQRVADKKNDIFCCGAASEAEEEENYVSSTSGPINTCTSKALIPCMRSVVGKIVILFVFSAIFVILAVLAFTEVKNGFQISDIALRGSYQRDFVTIQETYFGGYSNSLISLNGDQDWETTSSSNPADALNCDDSSCKSFVFKQMLDSLEASDLTQGV---LDLTWLLTGSTTLNGFRASSIAPPAGFNAANWADSSYGTPPAAFRSVFSAWAGTVGATSLSNLACRDWSTDTLVVCTKYEATNDVKLDAAASSIYTKNLLDDDDFIAVIKDGRKRVDAIDP 697
BLAST of mRNA_Ecto-sp13_S_contig5887.16400.1 vs. uniprot
Match: A0A2K1KM08_PHYPA (SSD domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KM08_PHYPA) HSP 1 Score: 181 bits (460), Expect = 3.580e-45 Identity = 144/570 (25.26%), Postives = 266/570 (46.67%), Query Frame = 1
Query: 25 CCLSWAATKLETDLIFAGVD-----DNDGSIKYLMTSQANFPINHPAWISTMEARGVTT--EEGREAVALGWEAAMVDEMTPRFEGEAGSGFGEGETFEDVDLDFFVKRSGDDIIENGNSPEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTL--------VHTTDSPGD--PRRRLVTTLVHAGPSVTVTSIAVASCFLVASAVNILTVRYFALHMGFQMLFHLVLLHLMLLPLMYWDSVRVAAKRSD--MFLIKLSPQGILPEAEFACANNTQ----------------RFVEKFYAPLVRNKIFKTLVIVIAIAMTAALAWLGFSEIKLGVGLNTLAVEGSYQNSFLGVFETEFDASSVMLVTKEVDFGTYQETLLEMQDVVQDVEWVSDVSTIKDNSWLANSF--SSLLTPTEEIIPADE--FNERFAEWIQGQ-GVTSANNFYCAEGTDGPRVDCAEF--------DPDTTVIKASQQLLYVHDQTTRENNVKMFRDMREAVDSV 1590
CC++W L V+ N + + N+ +HP + + R VT+ + RE + WE AM+ ++ P + FG+GE +E++ L+F + +S DII + + + II+ ++ A + P ++S L+L GM VV + A G + IP +PL+ SVVPFL+LG+GIDD+ + + L + ++PGD P R + L AGPSV +T+ +V + F ++S + ++F MG H + + L+ +P+M D+ RV A+ +D ++L + PEA + ++ R+V ++YAPL + +FK +V+V+ + ++ +LGF +++ G+ L+ + + GSYQN+F E F + V +VT+++D+ Q L+EM ++ +W I ++S L N + + + IPA+ + + W G G+ S + YC + ++ C + +P+ + + + +H +N+ M R VD +
Sbjct: 346 CCMTWFGAHLPIFTALGSVEYDASGKNISKVGGVRWGSNNYHHDHPLFAEYISNRLVTSVGSDEREHLVKKWEDAMIHDLDPMRRHATNTSFGDGEMYENLQLEFNMWKSTRDIIADASKSPLWQIILG--AALVSAYAFLAFLNLRNP----VHSHTSLALMGMAVVGFAVLAGFGLTALCGIPFSPLAGSVVPFLALGLGIDDVFVLVNVLRNFLEDPKLQALNTPGDLVPEREMRHALTLAGPSVILTTFSVLAAFFISSMNPMPVAQWFCWQMGLTATVHTLGMILIFMPIMALDARRVKARYNDPNLWLFCGIRKSKAPEAPYTKEATSEFSDPSFQDSTGSSAISRWVARYYAPLFESNLFKIIVVVLFSGLLVSMTYLGFEKVEHGLRLSDVTLTGSYQNTFARTTEDRFTSYDVWIVTRDIDYAKNQNNLVEMYRALEKTKWNPPQPGILESSPLGNLYLWNQIAYNVSWPIPANNQTYYDYIKHWSAGPLGIASLQDIYCEDSITKEQLSCMQDAHAPGYKNNPNFRIASSKTGMFALHLGAGTSSNLDMMTKTRTIVDDL 909
BLAST of mRNA_Ecto-sp13_S_contig5887.16400.1 vs. uniprot
Match: A0A2K1K5S4_PHYPA (SSD domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K5S4_PHYPA) HSP 1 Score: 179 bits (455), Expect = 1.590e-44 Identity = 154/573 (26.88%), Postives = 267/573 (46.60%), Query Frame = 1
Query: 25 CCLSW--AATKLETDLIFAGVDDNDGSIKYLMT------SQANFPINHPAWISTMEAR-GVTTEEG-REAVALGWEAAMVDEMTPRFEGEAGSGFGEGETFEDVDLDFFVKRSGDDIIENGNSPEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTLVHTTDSPG----------DPRRRLVTTLVHAGPSVTVTSIAVASCFLVASAVNILTVRYFALHMGFQMLFHLVLLHLMLLPLMYWDSVRVAAKRSDMFL---IKLSPQGILPEAE--------------FACANNTQRFVEKFYAPLVRNKIFKTLVIVIAIAMTAALAWLGFSEIKLGVGLNTLAVEGSYQNSFLGVFETEFDASSVMLVTKEVDFGTYQETLLEMQDVVQDVEWVSDVSTIKDNSWLANSF--SSLLTPTEEIIPAD---EFNERFAEWIQGQ-GVTSANNFYCAEGTDGPRVDCAEF--------DPDTTVIKASQQLLYVHDQTTRENNVKMFRDMREAVDSV 1590
CC++W A T + T L G + D S K + N+ +HP + + R GV T+ RE + WE M+ + P + FG GE +ED+ ++F + RS DII + + II+ + + I+ ++ + + P ++S L+ GM VV+ S A G + I +PL+ SVVPFL+LG+GIDD+ + + TL + + P P R + TL AGPSV +T+ +V + F ++S + ++F MG H + + L+ +P+M D+ RV A +D L + PEA + ++ R+V YAPL + FK V+V+ + ++ +LGF ++ G+ L+ + + GSYQN+F E F + V +VT++VD+ +Q L+E+ +++ W + I D+S L N + + + +P+D EF+E W G GV S + YC + G ++ C + +P+ + + + +H +N+ M + R VD +
Sbjct: 346 CCMTWFGAHTPILTAL---GSVEYDASRKNITKIGGVRWGSNNYHHDHPLFTEYISNRLGVNTDSREREGLVKAWEDFMIHNLNPLRRHATNTSFGGGEKYEDLQVEFNMWRSTRDIIAEASEAPLWQIILGVVLVSIYGFIAFLNVR--NP----VHSHTTLAGLGMVVVSFSVLAGFGLTAICGIAFSPLAGSVVPFLALGLGIDDVFVLVNTLRNYLEDPKLQALSTANDPTPDREMRLTLALAGPSVVLTTFSVLAAFFISSINPMPVAQWFCWQMGLTATVHTLGMILIFMPIMAIDARRVKAHYNDPNLWLFCGIRNMSYKPEASNGDHFDASDPSFQNSSGSSAISRWVATHYAPLFESNYFKVCVVVVFALLLVSMTYLGFERVEHGLKLSDVTLTGSYQNTFARTTEERFTSYDVWIVTRDVDYMKHQSNLIEIYRALENTSWNPPLPGILDSSPLGNFYLWNKIAFNLSWPLPSDNRTEFDEYNRNWASGPLGVISLQDLYCEDNATGQQLSCFQDTYASSYKPNPNFRIAASKAGMFALHLGAKTSSNLAMIKQTRAVVDEL 909
BLAST of mRNA_Ecto-sp13_S_contig5887.16400.1 vs. uniprot
Match: F2UAQ0_SALR5 (SSD domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UAQ0_SALR5) HSP 1 Score: 179 bits (453), Expect = 3.500e-44 Identity = 151/567 (26.63%), Postives = 260/567 (45.86%), Query Frame = 1
Query: 25 CCLSWAATKLETDLIFAGVDDNDG-------------SIKYLMTSQANFPINHPAWISTMEAR--GVTTEEGREAVALGWEAAMVDEMTPRFEGEAGSGFGEGETFEDVDLDFFVKRSGDDIIENGNSPEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTLVHTTDSPG-DPRRRLVTTLVHAGPSVTVTSIAVASCFLVASAVNILTVRYFALHMGFQMLFHLVLLHLMLLPLMYWDSVRVAAKRSDMFLIKLSPQGILPEAEFACANNTQRFVEKFYAPLVRNKIFKTLVIVIAIAMTAALAWLGFSEIKLGVGLNTLAVEGSYQNSFLGVFETEFDASSVMLVTKEVDFGTYQETLLEMQDVVQDVEWVSDVSTIKDNSWLANSFSSLLTPTEEIIPADEFNERFAEWIQGQGVTSANNFYCAEGTDGPRVDCAE----------FDPDTTV-IKASQQLLYVHDQTTRENNVKMFRDMREAVDSV--------DPDRDTFAYS 1620
C L+W+ KL +L + + S++ T N+ H + +++ TT+ REA+ +E A+ D ++ AG+GF +GE FED F ++RS D + EP L++ +L + A V + S F A+YS ++ G+ ++ STAA LGF + I TP+S +VVPF++LG+GIDD+++ + + P DP + TT+ AGPSV+ TS+ F +ASA + V+ F M + + VL+ + +PL+Y ++ RV A+R + + P +P+ + RF + ++ + LV+V A W F +I+ GV +++A E SYQ F E++F + LVT+ DF Q+ +L +Q V+D + + WL + S + + + D+F +F+EW+ G+T + YC + V C + F + V + AS+ L Y+ + +++ + R R D+ DPD +F S
Sbjct: 812 CFLTWSGLKLPYELALGPLTFENATASVPSAASGRLVSVRSQRTGGNNYNSEHHVFQDSIDELLDKTTTKSEREAIHRRFERAVADHYDALWKRNAGTGFADGEEFEDQRFYFTLERSIPDTVAEAGKIEPGLLVGGFL--CLLAYVMLVSANFRN----AIYSHAWIAFAGVVLITASTAAALGFSAYCGIDFTPISSNVVPFVALGVGIDDVLVILAAFGNAVLRPASDPADVIKTTMADAGPSVSFTSLTNFVAFFIASATPVRVVQLFCYQMVISVALNYVLILTVFVPLLYLEARRVHAQRPEALCVCHRPGTPVPKQAHPLLD---RFFSRHIGRVLMTTPARVLVLVCAAIAIGLSIWQVF-DIQRGVLFSSVATEDSYQYDFAVRLESDFTMYNGYLVTESEDFPAAQQNILNAVASLQQSPRVADSAPVASIFWLHSMLLSQTGNSTQPVAEDDFYPQFSEWLAALGITFLPDLYCIDSRYDTPVSCYDIVGAFSTPRAFGSNANVRLAASRGLFYISNVRYQDDYLDAIRSTRSYTDAASDAYDNEDDPDYRSFVIS 1368
BLAST of mRNA_Ecto-sp13_S_contig5887.16400.1 vs. uniprot
Match: A9V563_MONBE (Patched-like protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V563_MONBE) HSP 1 Score: 177 bits (450), Expect = 8.300e-44 Identity = 138/497 (27.77%), Postives = 237/497 (47.69%), Query Frame = 1
Query: 181 TTEEGREAVALGWEAAMVDEMTPRFEGEAGSGFGEGETFEDVDLDFFVKRSGDDIIENGNSPEPYLIIIAYLGMVIFAAVSMGSWKFSEPKSVALYSRVLLSLGGMFVVALSTAACLGFISALSIPLTPLSVSVVPFLSLGIGIDDMIIFIYTLVHTTDSPGDPRRRLVTTLVHAGPSVTVTSIAVASCFLVASAVNILTVRYFALHMGFQMLFHLVLLHLMLLPLMYWDSVRV-AAKRSDMFLIKLSPQGILPEAEFACANNTQRFVEKFYAPLVRNKIFKTLVIVIAIAMTAALAWLGFSEIKLGVGLNTLAVEGSYQNSFLGVFETEFDASSVMLVTKEVDFGTY--QETLLEMQDVVQDVEWVSDVSTIKDNSWLANSFSSLLTPTEEI--IPADEFNERFAEWIQGQGVTSANNFYCAEGTDGPRVDC-----AEFDPD--TTVIKASQQLLYVHDQTTRENNVKMFRDMREAVDSV--------DPDRDTF 1611
TTE+ R + L +E +VD P + G+ + + + D F RS DD++E + E L++ YL M+ + + +++ S +YS +++G + V+A ST A LG + IP TP+S +V+PF++LGIGIDD + + G + + T+ AGPSV TS+ A F VA+++ + V+ F M ++ + + L + +P++ D+ RV A +R + F K + ++E + RF +Y P + + L++V+ + W GF E + G+ +T+A +G+YQ+ F + E F S ++T F + Q TLL +Q WV + + I WL S+ T ++ +P +F FA W+ G GVTS + C + DG C E DPD T + +++ Y+ + + +N + D R+ VD V DP+ +TF
Sbjct: 809 TTEDERSDIVLAFEKKIVDAFLPMANKDEGTIYRDDPKYADESFFFNTWRSTDDVVEEASKLETGLLVGGYLAMLAYVFLQFTNFRNS------IYSHGWIAVGSVIVIAFSTGAALGLTAWFGIPFTPISNNVIPFIALGIGIDDAFVVLRAYTREVALGGTVQDVMGRTMADAGPSVFFTSVVNAVAFGVAASMPVRIVQLFCQQMVVSVVVNFLFLIFLFVPMIMLDASRVLAGRRENCF--KCGDETATNKSEDVYS----RFYGNYYGPALVKTPVRILILVLFAVFFGLMVWQGFFENETGLRTSTVAPDGTYQHEFAVLLEENFQLYSSNMITTSSRFESVEMQTTLLAATAALQTSPWVDNGAPISSTYWLHRFLGSVNGNTSDLTPVPESQFYTEFAGWLGGLGVTSLPDLICQD-EDGVHTSCFDIVGTESDPDFPTITLYSTRGTFYLQNLDSTDNFLDAIEDTRDRVDEVLDEYDDSSDPEFETF 1292 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5887.16400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5887.16400.1 >prot_Ecto-sp13_S_contig5887.16400.1 ID=prot_Ecto-sp13_S_contig5887.16400.1|Name=mRNA_Ecto-sp13_S_contig5887.16400.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=543bp AVAGGSPACCLSWAATKLETDLIFAGVDDNDGSIKYLMTSQANFPINHPAback to top mRNA from alignment at Ecto-sp13_S_contig5887:374..8733- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5887.16400.1 ID=mRNA_Ecto-sp13_S_contig5887.16400.1|Name=mRNA_Ecto-sp13_S_contig5887.16400.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8360bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5887:374..8733- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5887:374..8733- >mRNA_Ecto-sp13_S_contig5887.16400.1 ID=mRNA_Ecto-sp13_S_contig5887.16400.1|Name=mRNA_Ecto-sp13_S_contig5887.16400.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1629bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5887:374..8733- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |