prot_Ecto-sp13_S_contig5884.16394.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5884.16394.1
Unique Nameprot_Ecto-sp13_S_contig5884.16394.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length94
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5884.16394.1 vs. uniprot
Match: A0A6H5K4B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4B5_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.960e-29
Identity = 61/69 (88.41%), Postives = 62/69 (89.86%), Query Frame = 0 
Query:   26 MLRPRDHPVEPGGGSDDEGNDAASSGVCYDAMSSFNVTVSLGHKTPSPPAGSAASRQTGPRHTRTSRFV 94
            MLRPR HPV+P GGSDDEGNDAAS GVCYDAMSSFNVTVSLGHK PSPPAGSAASRQT PRHT TSR V
Sbjct:    1 MLRPRGHPVQPDGGSDDEGNDAASLGVCYDAMSSFNVTVSLGHKNPSPPAGSAASRQTCPRHTSTSRSV 69
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BLAST of mRNA_Ecto-sp13_S_contig5884.16394.1 vs. uniprot
Match: D7FLZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLZ7_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 3.280e-28
Identity = 60/69 (86.96%), Postives = 62/69 (89.86%), Query Frame = 0 
Query:   26 MLRPRDHPVEPGGGSDDEGNDAASSGVCYDAMSSFNVTVSLGHKTPSPPAGSAASRQTGPRHTRTSRFV 94
            MLRPR  PV+PGGGSDDEGNDAASSG+CYDAMSSFNVTVSLGHK PSPPAGSAASRQTGPR T T R V
Sbjct:    1 MLRPRGQPVQPGGGSDDEGNDAASSGMCYDAMSSFNVTVSLGHKNPSPPAGSAASRQTGPRQTSTLRSV 69
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5884.16394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K4B5_9PHAE1.960e-2988.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLZ7_ECTSI3.280e-2886.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5884contigEcto-sp13_S_contig5884:3811..5288 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5884.16394.1mRNA_Ecto-sp13_S_contig5884.16394.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5884 3810..5288 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5884.16394.1 ID=prot_Ecto-sp13_S_contig5884.16394.1|Name=mRNA_Ecto-sp13_S_contig5884.16394.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=94bp
LSLFGAYHTYFRLYEVPRSELRRKEMLRPRDHPVEPGGGSDDEGNDAASS
GVCYDAMSSFNVTVSLGHKTPSPPAGSAASRQTGPRHTRTSRFV
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