prot_Ecto-sp13_S_contig58756.16383.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig58756.16383.1
Unique Nameprot_Ecto-sp13_S_contig58756.16383.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length60
Homology
BLAST of mRNA_Ecto-sp13_S_contig58756.16383.1 vs. uniprot
Match: D8LT83_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT83_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 1.860e-26
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 VVTHPIDTVKSNLQGLSAGKYSGSLDCARQIIASSGVSGLFRGLSPRICR-CLSVGEEF 58
            VVTHPIDTVKSNLQGLSAGKYSGSLDCAR+IIASSGVSGLFRGLSPRICR CL +G +F
Sbjct:  231 VVTHPIDTVKSNLQGLSAGKYSGSLDCARKIIASSGVSGLFRGLSPRICRVCLEIGLQF 289          
BLAST of mRNA_Ecto-sp13_S_contig58756.16383.1 vs. uniprot
Match: A0A7S3P360_EUPCR (Hypothetical protein n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3P360_EUPCR)

HSP 1 Score: 64.3 bits (155), Expect = 9.770e-11
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    2 VTHPIDTVKSNLQGLSAGKYSGSLDCARQIIASSGVSGLFRGLSPRICRCLSVGEEFG 59
            +  P+DT+K+NLQGL  G Y  S DCA++I+ + GV GL++GL PR+ R   VG E G
Sbjct:  206 INQPLDTIKTNLQGLKGGDYKNSFDCAKKILTNEGVLGLYKGLKPRMTR---VGIEVG 260          
BLAST of mRNA_Ecto-sp13_S_contig58756.16383.1 vs. uniprot
Match: A0A7S0CXV1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CXV1_9EUKA)

HSP 1 Score: 62.8 bits (151), Expect = 3.620e-10
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 VVTHPIDTVKSNLQGLSAGKYSGS-LDCARQIIASSGVSGLFRGLSPRICR 50
            VVT PIDTVK+N+Q LSA +Y  S L C R+I+  SG+ G +RGL PR+CR
Sbjct:  206 VVTQPIDTVKTNMQSLSADRYDRSILGCCREIVRQSGLVGFYRGLGPRLCR 256          
BLAST of mRNA_Ecto-sp13_S_contig58756.16383.1 vs. uniprot
Match: W7T809_9STRA (Tricarboxylate transport mitochondrial-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T809_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.910e-10
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    1 VVTHPIDTVKSNLQGLSAGKYSGSLDCARQIIASSGVSGLFRGLSPRICRC-LSVGEEF 58
            + THPIDTVKSN+Q LSA KY+ S +C   I+ + G+ GL++G++PR  R  L +G  F
Sbjct:  243 IATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHF 301          
BLAST of mRNA_Ecto-sp13_S_contig58756.16383.1 vs. uniprot
Match: A0A7S3JG27_9SPIT (Hypothetical protein n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JG27_9SPIT)

HSP 1 Score: 61.6 bits (148), Expect = 1.010e-9
Identity = 24/49 (48.98%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    2 VTHPIDTVKSNLQGLSAGKYSGSLDCARQIIASSGVSGLFRGLSPRICR 50
            +  P+D +K+NLQGL+A K+ G++DCA+QI+   GV GL++G+ PR+ R
Sbjct:  217 INQPLDVIKTNLQGLNAHKFKGTVDCAKQIVRHEGVMGLYKGVKPRMAR 265          
BLAST of mRNA_Ecto-sp13_S_contig58756.16383.1 vs. uniprot
Match: A0A7S3JEL4_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JEL4_9SPIT)

HSP 1 Score: 61.2 bits (147), Expect = 1.080e-9
Identity = 27/59 (45.76%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    1 VVTHPIDTVKSNLQGLSAGKYSGSLDCARQIIASSGVSGLFRGLSPRICR-CLSVGEEF 58
            ++ +PID +K+++QGL A KY+G +DC +QI AS G+ G ++G+ PR+ R CL V   F
Sbjct:  193 MLNNPIDCIKTSVQGLDAHKYNGFVDCFKQIYASEGILGFYKGVGPRLARVCLDVAITF 251          
BLAST of mRNA_Ecto-sp13_S_contig58756.16383.1 vs. uniprot
Match: A0A6V3A8C4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3A8C4_HETAK)

HSP 1 Score: 61.2 bits (147), Expect = 1.440e-9
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    4 HPIDTVKSNLQGLSAGKYSGSLDCARQIIASSGVSGLFRGLSPRICRCL 52
            HP+D VKS +QGL AG+Y G+LDC RQ+ A  G + L++G  PR  R +
Sbjct:  212 HPVDVVKSRMQGLDAGRYRGALDCLRQVAAEGGAAALYKGAGPRSARVM 260          
BLAST of mRNA_Ecto-sp13_S_contig58756.16383.1 vs. uniprot
Match: R1DWR1_EMIHU (Mitochondrial citrate carrier n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DWR1_EMIHU)

HSP 1 Score: 60.8 bits (146), Expect = 1.820e-9
Identity = 29/59 (49.15%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    1 VVTHPIDTVKSNLQGLSAGKYSGSLDCARQIIASSGVSGLFRGLSPRICR-CLSVGEEF 58
            V++ PID V++N+  L A +YS SL CAR I+ S G+ GLF G+ PRICR C+    +F
Sbjct:  207 VLSQPIDVVRANMMSLDARRYSSSLACARAILRSGGLPGLFLGVGPRICRVCVEESLKF 265          
BLAST of mRNA_Ecto-sp13_S_contig58756.16383.1 vs. uniprot
Match: A0A7J7QP42_9CHLO (Mitochondrial carrier n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QP42_9CHLO)

HSP 1 Score: 52.8 bits (125), Expect = 1.710e-6
Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 0
Query:    4 HPIDTVKSNLQ--GLSAGKYSGSLDCARQIIASSGVSGLFRGLSPRICR 50
            +P+D +KS LQ    +  +YSG LDC RQ++A+ GV GLFRG  P + R
Sbjct:  273 YPLDAIKSKLQVDSYANPRYSGILDCGRQVVAAEGVKGLFRGFGPALAR 321          
BLAST of mRNA_Ecto-sp13_S_contig58756.16383.1 vs. uniprot
Match: A0A7S0G5W0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5W0_9RHOD)

HSP 1 Score: 50.4 bits (119), Expect = 1.790e-6
Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    3 THPIDTVKSNLQGLSAGK-YSGSLDCARQIIASSGVSGLFRGLSPRI 48
            T P+D VK+ L   S+ + Y G+LDC RQ + + G+SGLFRG+ PR+
Sbjct:   10 TTPLDVVKTRLMTQSSTRTYQGALDCVRQTVQAEGISGLFRGVGPRV 56          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig58756.16383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LT83_ECTSI1.860e-2689.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3P360_EUPCR9.770e-1150.00Hypothetical protein n=1 Tax=Euplotes crassus TaxI... [more]
A0A7S0CXV1_9EUKA3.620e-1058.82Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
W7T809_9STRA5.910e-1049.15Tricarboxylate transport mitochondrial-like protei... [more]
A0A7S3JG27_9SPIT1.010e-948.98Hypothetical protein n=1 Tax=Euplotes harpa TaxID=... [more]
A0A7S3JEL4_9SPIT1.080e-945.76Hypothetical protein (Fragment) n=1 Tax=Euplotes h... [more]
A0A6V3A8C4_HETAK1.440e-951.02Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
R1DWR1_EMIHU1.820e-949.15Mitochondrial citrate carrier n=1 Tax=Emiliania hu... [more]
A0A7J7QP42_9CHLO1.710e-648.98Mitochondrial carrier n=1 Tax=Scenedesmus sp. NREL... [more]
A0A7S0G5W0_9RHOD1.790e-648.94Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 1..51
e-value: 7.4E-11
score: 41.8
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 1..59
score: 13.61
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 1..55
e-value: 4.0E-14
score: 53.9
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 1..52
NoneNo IPR availablePANTHERPTHR45788FAMILY NOT NAMEDcoord: 2..54
NoneNo IPR availablePANTHERPTHR45788:SF4TRICARBOXYLATE TRANSPORT PROTEIN, MITOCHONDRIALcoord: 2..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig58756contigEcto-sp13_S_contig58756:428..607 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig58756.16383.1mRNA_Ecto-sp13_S_contig58756.16383.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig58756 428..607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig58756.16383.1 ID=prot_Ecto-sp13_S_contig58756.16383.1|Name=mRNA_Ecto-sp13_S_contig58756.16383.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp
VVTHPIDTVKSNLQGLSAGKYSGSLDCARQIIASSGVSGLFRGLSPRICR
CLSVGEEFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom_sf