prot_Ecto-sp13_S_contig5870.16376.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5870.16376.1
Unique Nameprot_Ecto-sp13_S_contig5870.16376.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length200
Homology
BLAST of mRNA_Ecto-sp13_S_contig5870.16376.1 vs. uniprot
Match: D7G7I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I5_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 2.990e-51
Identity = 101/111 (90.99%), Postives = 102/111 (91.89%), Query Frame = 0
Query:   89 ALTEPTSLFTPSPLPDVTTTPATVASSGGGDTSTMSVVAVAVGGGLVVGAIATLILLFKTGRLKLCRNGSSRGPSPGVGPIPVAAGPSAMESARRGMQIPAAIQYPEALRA 199
            ALTE TS FTP PLPD+TTTPATVASSGGGD STMSVVAVAVGGGLVVGAIATLILLFKTGRLK CRNGSS G S GVGPIP AAGPSAMESARRGMQIPAAIQYPEALRA
Sbjct:  232 ALTESTSPFTPPPLPDITTTPATVASSGGGDPSTMSVVAVAVGGGLVVGAIATLILLFKTGRLKHCRNGSSHGTSRGVGPIPAAAGPSAMESARRGMQIPAAIQYPEALRA 342          
BLAST of mRNA_Ecto-sp13_S_contig5870.16376.1 vs. uniprot
Match: A0A6H5K4G7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4G7_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 4.580e-42
Identity = 89/111 (80.18%), Postives = 92/111 (82.88%), Query Frame = 0
Query:   89 ALTEPTSLFTPSPLPDVTTTPATVASSGGGDTSTMSVVAVAVGGGLVVGAIATLILLFKTGRLKLCRNGSSRGPSPGVGPIPVAAGPSAMESARRGMQIPAAIQYPEALRA 199
            ALTE TS FTPSPLPD+TTTPATVASSGGG            GGGLVVGAIA LILLFKTGRLK CRNG+S GPSPGVG IP AAGPSAMESARRGMQ+PAAIQYPEALRA
Sbjct:  267 ALTESTSPFTPSPLPDITTTPATVASSGGG-----------FGGGLVVGAIAILILLFKTGRLKHCRNGNSHGPSPGVGQIPAAAGPSAMESARRGMQLPAAIQYPEALRA 366          
BLAST of mRNA_Ecto-sp13_S_contig5870.16376.1 vs. uniprot
Match: D7FXV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV8_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 2.450e-35
Identity = 87/140 (62.14%), Postives = 98/140 (70.00%), Query Frame = 0
Query:   60 QANVLTAAPIVLYAP-DAXXXXXXXXXXXPALTEPTSLFTPSPLPDVTTTPATVASSGGGDTSTMSVVAVAVGGGLVVGAIATLILLFKTGRLKLCRNGSSRGPSPGVGPIPVAAGPSAMESARRGMQIPAAIQYPEALR 198
            +    T API + +P +            P+ TE T  FT SPLP+ TTTPATVASSGGGDTSTMSVVA AVGGGLVVGAIA ++LLFKTGRLK C N +S  PSPGVG IP  A PSA  SA  G Q+PAA+QYPEALR
Sbjct:  296 ETETFTPAPIAIISPRETVSPLTTNPFPSPSFTESTPPFTLSPLPEGTTTPATVASSGGGDTSTMSVVAGAVGGGLVVGAIAAVVLLFKTGRLKPCGNDNSSEPSPGVGSIPAGA-PSATSSAIAGTQLPAAMQYPEALR 434          
BLAST of mRNA_Ecto-sp13_S_contig5870.16376.1 vs. uniprot
Match: D7FYB8_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB8_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 4.230e-21
Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 0
Query:   91 TEPTSLFTPSPLPDVTTTPATVASSGGGDT--STMSVVAVAVGGGLVVGAIATLILLFKTGRLKLCRNGSSRGPSPGVGPIPVAAGPSAMESARRGMQIPAAIQYPEAL 197
            T PT+L T SPL D TT PAT+ASSG GD+  +T+ +VA  +G G        +++LFKTGRLK CR+G+  GPSPG+G IP AA PSA  SA  G+Q+P AIQYPE L
Sbjct:  166 TAPTALLTLSPLLDGTTAPATIASSGRGDSDSATVGLVAGVLGVGXXXXXXGAVVVLFKTGRLKSCRHGTPNGPSPGMGSIPAAA-PSATSSAMEGIQLPPAIQYPEVL 273          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5870.16376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G7I5_ECTSI2.990e-5190.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4G7_9PHAE4.580e-4280.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXV8_ECTSI2.450e-3562.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FYB8_ECTSI4.230e-2155.96Ferric reductase n=1 Tax=Ectocarpus siliculosus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..146
NoneNo IPR availableTMHMMTMhelixcoord: 124..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5870contigEcto-sp13_S_contig5870:44..1300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5870.16376.1mRNA_Ecto-sp13_S_contig5870.16376.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5870 44..1300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5870.16376.1 ID=prot_Ecto-sp13_S_contig5870.16376.1|Name=mRNA_Ecto-sp13_S_contig5870.16376.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=200bp
NPNSYVPSGRYARAYPCSRRAYPPYPPSHHAHPSSCIELTPGPITLSSSI
TTPSPTPGDQANVLTAAPIVLYAPDAVSSPTATSFPTPALTEPTSLFTPS
PLPDVTTTPATVASSGGGDTSTMSVVAVAVGGGLVVGAIATLILLFKTGR
LKLCRNGSSRGPSPGVGPIPVAAGPSAMESARRGMQIPAAIQYPEALRA*
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