prot_Ecto-sp13_S_contig5868.16368.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5868.16368.1
Unique Nameprot_Ecto-sp13_S_contig5868.16368.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length242
Homology
BLAST of mRNA_Ecto-sp13_S_contig5868.16368.1 vs. uniprot
Match: D8LU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU92_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 2.140e-59
Identity = 101/122 (82.79%), Postives = 104/122 (85.25%), Query Frame = 0
Query:   35 RCADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGFRTKSVNMDFWAVDEVARMTSMGNVKVNEIYERYVPSSWTKPTPDADQHQREQWILAKYKHPL------RQGGGRSHGVPEPGVL 150
            RCADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGFRTKSVNMDFWAVDEVARMTSMGNVKVNEIYERYVPSSWTKPTPDADQ QREQW+LAKYKH         + GG + G   P  L
Sbjct:    8 RCADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGFRTKSVNMDFWAVDEVARMTSMGNVKVNEIYERYVPSSWTKPTPDADQQQREQWVLAKYKHRYFMLPHYGKEGGEATGYQSPASL 129          
BLAST of mRNA_Ecto-sp13_S_contig5868.16368.1 vs. uniprot
Match: A0A836CKZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKZ6_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.570e-34
Identity = 70/117 (59.83%), Postives = 81/117 (69.23%), Query Frame = 0
Query:   17 INRELLKLMRPGRIGGNRRCADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLG--FRTKSVNMDFWAVDEVARMTSMGNVKVNEIYERYVPSSWTKPTPDADQHQREQWILAKYK 131
            I++ELLKLMR G    NRRC DCDAELTD  NIWASV  GCFVCV+C  VH  L      KSV MD W  DE+  + +MGNV+ NE +ERYVP +WTKPTPDA+    E WI AKY+
Sbjct:  240 IDKELLKLMREGP---NRRCCDCDAELTDLRNIWASVKIGCFVCVNCKQVHELLEPPLPCKSVYMDAWLDDELETVKAMGNVRANECFERYVPPAWTKPTPDAEHSAIEAWIRAKYE 353          
BLAST of mRNA_Ecto-sp13_S_contig5868.16368.1 vs. uniprot
Match: A0A5P1ESM8_ASPOF (Uncharacterized protein n=3 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1ESM8_ASPOF)

HSP 1 Score: 82.4 bits (202), Expect = 8.610e-15
Identity = 47/126 (37.30%), Postives = 67/126 (53.17%), Query Frame = 0
Query:   10 GASPQMNINRELLKLMRPGRIGGNRRCADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGF---RTKSVNMDFWAVDEVARMTSMG-NVKVNEIYERYVPSSWTKPTPDADQHQREQWILAKYK 131
            G +P       L KL        NR CADC A        WAS + G F+C+ C  VHRSLG    +  SV +D W+ +E+  M  +G N   N IYE ++PS  +KP+PD+   +R ++I +KY+
Sbjct:    4 GTTPTRASRANLRKLKDLLHKSENRICADCGAPEPK----WASSNIGVFICLKCSGVHRSLGTHISKVLSVTLDDWSDEEIESMVEVGGNSYANSIYEAFLPSGLSKPSPDSSNEERSKFIRSKYE 125          
BLAST of mRNA_Ecto-sp13_S_contig5868.16368.1 vs. uniprot
Match: I0YZW3_COCSC (Arf GTPase activating protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZW3_COCSC)

HSP 1 Score: 77.8 bits (190), Expect = 1.220e-14
Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = 0
Query:   33 NRRCADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGF---RTKSVNMDFWAVDEVARMTSMGNVKVNEIYERYVPSSWTKPTPDADQHQREQWILAKYK 131
            NRRCADC+A     G  WASV+ GCF+C++C  VHRSLG    + +S  +D W  ++VA   SMGN + N  +E  + S + +P+ + D    +++I  KY+
Sbjct:   28 NRRCADCNAR----GPTWASVNLGCFICLNCSGVHRSLGVHCSKVRSTTLDTWLPEQVAFAQSMGNRRANLYWEARLSSGFKRPS-EGDMVGLKRFIEEKYR 124          
BLAST of mRNA_Ecto-sp13_S_contig5868.16368.1 vs. uniprot
Match: UPI001CF1BA0F (arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF1BA0F)

HSP 1 Score: 83.2 bits (204), Expect = 1.320e-14
Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 0
Query:   19 RELLKLMRPGRIG---GNRRCADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGF---RTKSVNMDFWAVDEVARMTSMGNVKVNEIYERYVPSSWTKPTPDADQHQREQWILAKYKHPL 134
            ++++ L  P RI    GN  CADC A   D    WAS++ G  VC+ C  +HRSLG    + +S+ +D W    V  M S+GNVKVN+IYE  +   + KPT +  + +R+++I  KY   L
Sbjct:  568 KKVIVLNAPERIRKIEGNSYCADCGAPRPD----WASINLGILVCIECSGIHRSLGVHVSKVRSLTLDKWEEQTVKYMESLGNVKVNKIYEGNM-GGYQKPTRECTKDERQKFIRLKYSERL 684          
BLAST of mRNA_Ecto-sp13_S_contig5868.16368.1 vs. uniprot
Match: A0A0J8B0I0_BETVV (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8B0I0_BETVV)

HSP 1 Score: 77.0 bits (188), Expect = 2.440e-14
Identity = 40/116 (34.48%), Postives = 65/116 (56.03%), Query Frame = 0
Query:   20 ELLKLMRPGRIGGNRRCADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGF---RTKSVNMDFWAVDEVARMTSMGNVKVNEIYERYVPSSWTKPTPDADQHQREQWILAKYKH 132
            E+ +L +  +   N+ CADC+++       WAS++ GCF+C+ C  +HRS+G    + +SV +D W    V  M   GN KVN++YE  + ++  KP       + EQ+I  KY+H
Sbjct:    5 EIDRLKQLLKKPDNKTCADCNSKQPR----WASINLGCFICIRCSGIHRSVGVHISKVRSVTLDEWQPAWVDNMEKWGNKKVNQLYEAKLGNA-RKPDATTGDREMEQYIRQKYEH 115          
BLAST of mRNA_Ecto-sp13_S_contig5868.16368.1 vs. uniprot
Match: A0A8E0S4S5_9TREM (Arf-GAP with coiled-coil ANK repeat and PH domain-containing protein 2 n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0S4S5_9TREM)

HSP 1 Score: 82.0 bits (201), Expect = 3.530e-14
Identity = 43/116 (37.07%), Postives = 65/116 (56.03%), Query Frame = 0
Query:   22 LKLMRPGRIGGNRRCADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGF---RTKSVNMDFWAVDEVARMTSMGNVKVNEIYERYVPSSW--TKPTPDADQHQREQWILAKYKH 132
            + L R   + GNR+CADC AE T+    WAS++ G  +C  C A HR LG    + +S+ +D W  +++  M ++GN+ VN IYE  V ++    +PT  +    R QW  AK+ H
Sbjct:  550 IVLWREPDLAGNRQCADCSAEETN----WASINLGVTLCTQCAAAHRGLGVHISKIRSLTLDNWEPEQLHVMLNLGNLLVNMIYEAQVRTAGGLNRPTGHSSSEHRRQWARAKWAH 661          
BLAST of mRNA_Ecto-sp13_S_contig5868.16368.1 vs. uniprot
Match: A0A197JX49_9FUNG (ArfGap-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JX49_9FUNG)

HSP 1 Score: 77.4 bits (189), Expect = 7.600e-14
Identity = 44/124 (35.48%), Postives = 64/124 (51.61%), Query Frame = 0
Query:   32 GNRRCADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGF---RTKSVNMDFWAVDEVARMTSMGNVKVNEIYERYVPSSWTKPTPDADQHQREQWILAKYKHPLRQGGGRSHGVPEPGVLVP 152
            GN+ C DC  +       WAS + GCF+C+ C  VHRS+G    + KSV++D W V++V  M   GN K N  +E  +P    +  P+      + WI +KY+H      G   G+P+P  L P
Sbjct:   29 GNKFCVDCRKKDPR----WASFNLGCFMCIRCSGVHRSMGTHISKVKSVDLDSWTVEQVENMIKWGNEKANMYWEARLPE---RNIPNESTSGIDPWIRSKYEHKQFAQKG---GLPDPSELGP 142          
BLAST of mRNA_Ecto-sp13_S_contig5868.16368.1 vs. uniprot
Match: A0A7S3K3P3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3P3_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.220e-13
Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = 0
Query:   11 ASPQMNINRELLKLMRPGRIGGNRRCADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGFR---TKSVNMDFWAVDEVARMTSMGNVKVNEIYERYVPSSWTKPTPDADQHQREQWILAKYKH 132
            A P+  + +EL+KL        N+ CADC A+    G  WAS   G FVC+ C  +HR+LG      +SVN+D W  ++VARMT  GN++  E +E  +P  +  P   A      ++I  KY++
Sbjct:    7 ADPKQKL-QELIKLPE------NQLCADCGAK----GPRWASASIGVFVCIRCSGIHRNLGTHLSFVRSVNLDEWKPEQVARMTKWGNLRAKEYFEHSIPPGYQIPNEHASVQHVTRFIRDKYEY 120          
BLAST of mRNA_Ecto-sp13_S_contig5868.16368.1 vs. uniprot
Match: A0A152A2L6_9MYCE (Ankyrin repeat-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A2L6_9MYCE)

HSP 1 Score: 78.6 bits (192), Expect = 4.990e-13
Identity = 46/130 (35.38%), Postives = 71/130 (54.62%), Query Frame = 0
Query:   10 GASPQMNI-NRELLKLMRPGRIG-GNRRCADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGF---RTKSVNMDFWAVDEVARMTSMGNVKVNEIYERYVPSSWTKPTPDADQHQREQWILAKYKHPL 134
            G+S  +++ N + L L+R  R+   N+ C DC A+      +WAS++ G  +C+ C  +HR LG    + +S+ +D W  + +  M S+GN KVN+IYE  VP    KPT +     R +WI  KY   L
Sbjct:  478 GSSGSLSVANEDPLTLLR--RVNPSNQFCCDCSAK----DPVWASINFGSILCIDCSGIHRGLGVHISKVRSLALDKWEPELLGMMKSIGNDKVNKIYEESVPEGRKKPTSNDTFEVRSKWIRDKYDRRL 601          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5868.16368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU92_ECTSI2.140e-5982.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CKZ6_9STRA4.570e-3459.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5P1ESM8_ASPOF8.610e-1537.30Uncharacterized protein n=3 Tax=Asparagus officina... [more]
I0YZW3_COCSC1.220e-1440.20Arf GTPase activating protein n=1 Tax=Coccomyxa su... [more]
UPI001CF1BA0F1.320e-1438.52arf-GAP with coiled-coil, ANK repeat and PH domain... [more]
A0A0J8B0I0_BETVV2.440e-1434.48Arf-GAP domain-containing protein (Fragment) n=1 T... [more]
A0A8E0S4S5_9TREM3.530e-1437.07Arf-GAP with coiled-coil ANK repeat and PH domain-... [more]
A0A197JX49_9FUNG7.600e-1435.48ArfGap-domain-containing protein n=1 Tax=Linnemann... [more]
A0A7S3K3P3_9STRA1.220e-1336.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A152A2L6_9MYCE4.990e-1335.38Ankyrin repeat-containing protein n=1 Tax=Tieghemo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 56..73
score: 43.49
coord: 33..52
score: 25.69
coord: 74..95
score: 33.39
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 19..140
e-value: 1.0E-17
score: 74.9
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 30..132
e-value: 3.7E-25
score: 88.3
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 19..131
score: 19.625
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 10..136
e-value: 2.5E-32
score: 113.5
NoneNo IPR availablePANTHERPTHR45705FAMILY NOT NAMEDcoord: 13..132
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 29..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5868contigEcto-sp13_S_contig5868:3948..8505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5868.16368.1mRNA_Ecto-sp13_S_contig5868.16368.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5868 3731..8621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5868.16368.1 ID=prot_Ecto-sp13_S_contig5868.16368.1|Name=mRNA_Ecto-sp13_S_contig5868.16368.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
MPPPLPERPGASPQMNINRELLKLMRPGRIGGNRRCADCDAELTDYGNIW
ASVDQGCFVCVHCLAVHRSLGFRTKSVNMDFWAVDEVARMTSMGNVKVNE
IYERYVPSSWTKPTPDADQHQREQWILAKYKHPLRQGGGRSHGVPEPGVL
VPDPADTPRRLFCGGGPRWLHAGREDKPRKRARGRRDSRGGARLLPRGGQ
PPRVPNAGAPAAVCVPGRDAPPQPREAADHVLLHPDQQLWP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO