prot_Ecto-sp13_S_contig5866.16364.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5866.16364.1
Unique Nameprot_Ecto-sp13_S_contig5866.16364.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length321
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5866.16364.1 vs. uniprot
Match: D7G8Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z9_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 1.440e-29
Identity = 80/92 (86.96%), Postives = 83/92 (90.22%), Query Frame = 0 
Query:   70 TQQQGEGEVSAPAEPPASSKLSPGLAARMKAMRSSTDSVPEGEEGEXXXXXXXXXXXXATSGSSSSXSKVSPGLAARMGRAFPIPMPGGGMP 161
            T Q GEGEVSAPAE PA+SKLSPGLAAR+ AMRSSTD VPEGEEGEXXXXXXXXXXX ATSGSSSS SKVSPGLAARMG+AFPIPMPGG  P
Sbjct:  135 TSQHGEGEVSAPAEAPAASKLSPGLAARLNAMRSSTDYVPEGEEGEXXXXXXXXXXXLATSGSSSSFSKVSPGLAARMGKAFPIPMPGGEQP 226
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5866.16364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8Z9_ECTSI1.440e-2986.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..320
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.498

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5866contigEcto-sp13_S_contig5866:1417..3083 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5866.16364.1mRNA_Ecto-sp13_S_contig5866.16364.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5866 942..3126 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5866.16364.1 ID=prot_Ecto-sp13_S_contig5866.16364.1|Name=mRNA_Ecto-sp13_S_contig5866.16364.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=321bp
MSASQLVRYLLLLCMQSLRYTGSMRRSRGCLEHIKIKLEQHFANDLTRKI
RALPSPAHIHTLKTQLIKFTQQQGEGEVSAPAEPPASSKLSPGLAARMKA
MRSSTDSVPEGEEGEEEEETPPPPPALATSGSSSSSSKVSPGLAARMGRA
FPIPMPGGGMPAGGVAELKRRKQEKEQAERAAAGMPEEPKPSETAVEQKP
GELQHANLSRPTISQRRRPRDRGSGSSSTSSSSSSSSSSPSVSTVCHGTR
KRNLERAGENSFAASGNNGCIVRKHGREDGCPGSSSSSSSSSSNTSTNGH
ELCWQDELHVKGRVDPCCQR*
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