prot_Ecto-sp13_S_contig11915.1634.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11915.1634.1
Unique Nameprot_Ecto-sp13_S_contig11915.1634.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length935
Homology
BLAST of mRNA_Ecto-sp13_S_contig11915.1634.1 vs. uniprot
Match: D8LB86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB86_ECTSI)

HSP 1 Score: 1311 bits (3392), Expect = 0.000e+0
Identity = 755/968 (78.00%), Postives = 777/968 (80.27%), Query Frame = 0
Query:    1 MPDAGGIRRRASQGGSWEVELVGPMEVATSGLNDNVAQQQRPEINGTLDQIPRLMHKLHNDTNERTRSAHLTSSYRDQYLTRKEHQPISNQATCSTAAGSPTRRDVPYDIGEYIIHSVPPPVPPPRALELVKEEVHRALKAFSTQPVKGEPRAPLPSDLLRPFDVSKDGRVTYREFRTGILGLGIGLTAHEAEALAQVVDRKGTGLVDRGQFETAATRDWGSGGR-DGGWQGRPTSAPGRVPEAVGEPQTGSGALHSPGEHANHTQADDRSKARDGEKERAGGEVLPPPPTPSGAPQPLRQWSRPETTGRPSRNRGPSTLSFDCWQQNANRRNDSSNAVDAVVANTPAST------------------------------GSSSARSDGNGRRERSRNTAGTSATPAXXXXXXXXXXXXXXXXXQQPSQKYIQSLQTLRSLLQRDGVFDEVRSTPIADETNKSNRRSLSFGTETRGRRXXXXXXXXXXXXXXXXXXXXXXXXXXGS--DGKQRVDLSRVEHRRSRGEDCRADSPPLPDGAGANGDGRQXXXXXXXXXXASTGKTNVVVSDSEAPDHPAKARAVAARAESILRLRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTGLEDDEARHLAARYRKDFNGRSMVDYGRLFDNLEVQEGGLFGRGVTSSPGPSTSSGRGCWEDQQHSSSRDGGGGTRARSASLSAAGEGRRRGSRPMRAAAGARTRHSQRRCWRRGVPDAADDNFVRGGAPAETSQLVRRARAKTLALLDRHGTPSVDCVFGLVDQAHTQTVNSGELREALRILGGSDTLSEIEHRALFKGISKGRDRVHYRELLGTLRASEVAEHRERTQRKLQQQAGLPTSGRGSAIHWRHSDVLDWDAPPVGDGGRKGSGGVGLRGGRQHKESRRQALVFQRLRDGVRQIQEKQNSAGPVFDMFRQRGRGRVGGYGAAAATAAA 935
            MPDAG IRRRASQGGSW VE VGPMEVATS  NDNVAQQQRPEINGTLDQIPRLMHKLHN  NERT S  +TSSYRDQYLTRKE Q ISNQ TCSTAAGSPT RDVPYDIGEYIIHS PPPVPPPRALELVKEEVHRALKAFSTQPVKGEP+APLPSDLLRPFDVSKDGRVTYRE RTGILGLGIGLTA EAE LAQVVDR+GTGLVDRG FE AATRDWGSGG  DGGWQGRPTSAPGRV  AV E Q+ SGALHSPGEHA+H Q DD   A DGEK  AGGEVLPPPPTPS AP+PLRQWSR ETTGRPSRN GPSTLSFD WQQNANRRNDS+NA +AVV NTPA                                G  S+ SD N                                  QQ SQKYIQSLQTLRSLLQ D VFDEV+STPIADETNK NRRSLSFGTETRGRR                   XXXXXX     DGKQRVD ++VEHRR R ED RADSP              XXXXXXXXXX  TG T+VVVSD+EAPDH A+AR+VAARAESILRLRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTGLED EARHLAARYRKDFNGRSMVDYGRLFD+LEV+EG LFGRGVTSSPGPSTSSGRGCWE QQ SSS        ARSA  S AGEGRRRGSRPMRAAAGARTRHSQRR WRRGVPDAA  +FVRGGAPAE SQLVRRARAKTLALLDRHGTPSVDCVFGLVDQAHTQTV+SGELREALRILGGSDTLSEIEHRALFKGISKGRDRV YRELL TLRASEVAEHRERTQRKLQ QAGLPTSGRGSAIHWRHSDVLDWDAPP G G RKGS GVGL+GGRQHKESRRQALVFQRLRDGVRQIQEKQNSAGPVFDMFR+RGRGR GGY  AAAT AA
Sbjct:    1 MPDAGEIRRRASQGGSWGVEAVGPMEVATSSPNDNVAQQQRPEINGTLDQIPRLMHKLHNYNNERTGSTRVTSSYRDQYLTRKEQQRISNQVTCSTAAGSPTHRDVPYDIGEYIIHSAPPPVPPPRALELVKEEVHRALKAFSTQPVKGEPKAPLPSDLLRPFDVSKDGRVTYRELRTGILGLGIGLTAREAEELAQVVDREGTGLVDRGHFEAAATRDWGSGGGGDGGWQGRPTSAPGRVXGAVAESQSESGALHSPGEHASHPQVDDGRIAHDGEKGCAGGEVLPPPPTPSEAPEPLRQWSRSETTGRPSRNHGPSTLSFDYWQQNANRRNDSNNAANAVVTNTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPKSSNSDYNTHNNN-----------------------------QQLSQKYIQSLQTLRSLLQLDRVFDEVKSTPIADETNKPNRRSLSFGTETRGRRCERRRQEQSQHQSGLRPSGXXXXXXSCGVGDGKQRVDSTKVEHRRFREEDGRADSPXXXXXXXXXXX-XXXXXXXXXXXXXXTGNTSVVVSDTEAPDHLARARSVAARAESILRLRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTGLEDHEARHLAARYRKDFNGRSMVDYGRLFDSLEVKEGDLFGRGVTSSPGPSTSSGRGCWEAQQRSSSXXXXXXXXARSAPTSTAGEGRRRGSRPMRAAAGARTRHSQRRYWRRGVPDAAAADFVRGGAPAEESQLVRRARAKTLALLDRHGTPSVDCVFGLVDQAHTQTVSSGELREALRILGGSDTLSEIEHRALFKGISKGRDRVLYRELLDTLRASEVAEHRERTQRKLQHQAGLPTSGRGSAIHWRHSDVLDWDAPPAGGGDRKGSCGVGLKGGRQHKESRRQALVFQRLRDGVRQIQEKQNSAGPVFDMFRRRGRGRTGGYSDAAATVAA 938          
BLAST of mRNA_Ecto-sp13_S_contig11915.1634.1 vs. uniprot
Match: A0A6H5KLQ2_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ2_9PHAE)

HSP 1 Score: 1258 bits (3256), Expect = 0.000e+0
Identity = 713/895 (79.66%), Postives = 739/895 (82.57%), Query Frame = 0
Query:   78 QYLTRKEHQPISNQATCSTAAGSPTRRDVPYDIGEYIIHSVPPPVPPPRALELVKEEVHRALKAFSTQPVKGEPRAPLPSDLLRPFDVSKDGRVTYREFRTGILGLGIGLTAHEAEALAQVVDRKGTGLVDRGQFETAATRDWGSGGRDGGWQGRPTSAPGRVPEAVGEPQTGSGALHSPGEHANHTQADDRSKARDGEKERAGGEVLPPPPTPSGAPQPLRQWSRPETTGRPSRNRGPSTLSFDCWQQNANRRNDSSNAVDAVVANTPASTGSSSARSDGN--GRRERSRNTAGTSATPAXXXXXXXXXXXXXXXXXQQPSQKYIQSLQTLRSLLQRDGVFDEVRSTPIADETNKSNRRSLSFGTETRGRRXXXXXXXXXXXXXXXXXXXXXXXXXXGSDGKQRVDLSRVEHRRSRGEDCRADSPPLPDGAGANGDGRQXXXXXXXXXXASTGKTNVVVSDSEAPDHPAKARAVAARAESILRLRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTGLEDDEARHLAARYRKDFNGRSMVDYGRLFDNLEVQEGGLFGRGVTSSPGPSTSSGRGCWEDQQHSSSRDGGGGTRARSASLSAAGEGRRRGSRPMRAAAGARTRHSQRRCWRRGVPDAADDNFVRGGAPAETSQLVRRARAKTLALLDRHGTPSVDCVFGLVDQAHTQTVNSGELREALRILGGSDTLSEIEHRALFKGISKGRDRVHYR---------------------------------------ELLGTLRASEVAEHRERTQRKLQQQAGLPTSGRGSAIHWRHSDVLDWDAPPVGDGGRKGSGGVGLRGGRQHKESRRQALVFQRLRDGVRQIQEKQNSAGPVFDMFRQRGRGRVGGYGAAAA 931
            QY +    + ISNQATCSTAAGSPTRRDVPYD+GE IIHS PPPVPPPRALELVKEEVHRALKAFST+PVKGEP+APLPSDLLRPFDVSKDGRVTYREFRTGILGLGIGLTAHEAEALAQVVDR+GTGLVDRG FE AATRDWGS GRDGGWQGRPTSAPG VP AV EPQ G GALHSPGEH +H Q DD S  RDGEK  AGGEVLPPPPTPS AP+PLRQWSR ETTGRPSRNRGPSTLSFDCWQQNANRRN+S+NA DAVVA TPASTGSS  RSDGN  G  + SR+T+ T     XXXXXXX           QPSQKY+QSLQTLRSLLQRDGVFDEV+STPIADETNKSN RSLSFGTE RGRR                          G DGKQRVDLSRVEHRRSR EDCRADSP              XXXXXXXXXX STGKTNVVVSD+EAPDH A+A+AVAARAE IL+LRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTGLEDDEARHLAA YRKDFNGRSMVDYGRLFDN+EVQEGG++GRGVT SPGPS SSGRGCWEDQQHSSSRDGGGGTRARSAS+SAAGE RRRGSRPMRAAAG RTRHSQRR WRRGVPDAADDNFVRGGAPAE SQLVRRARAKTLALLDRHGT SVDCVFGLVDQAHTQTVNSGELREALRILGGSDTLSEIEHRALFKGISKGRDR+HYR                                       ELL TLRASEVAEHRERTQRKLQ QAGLPTSGRGSAIHWRHSDVLDWDAPP G GGRKGS GVGL+GGRQHKESRRQALVFQRLRDGV+QIQEKQNSA PVFDMFRQRGR R GGY  AAA
Sbjct:   40 QYCSGLSRRQISNQATCSTAAGSPTRRDVPYDVGECIIHSAPPPVPPPRALELVKEEVHRALKAFSTKPVKGEPKAPLPSDLLRPFDVSKDGRVTYREFRTGILGLGIGLTAHEAEALAQVVDREGTGLVDRGPFEAAATRDWGSSGRDGGWQGRPTSAPGSVPGAVAEPQIGGGALHSPGEHTSHPQVDDGSIVRDGEKGYAGGEVLPPPPTPSEAPEPLRQWSRLETTGRPSRNRGPSTLSFDCWQQNANRRNESNNAADAVVAKTPASTGSSIGRSDGNVNGHHKHSRDTS-TXXXXXXXXXXXXNSDYNTHNNNLQPSQKYLQSLQTLRSLLQRDGVFDEVKSTPIADETNKSNERSLSFGTEIRGRRRERRLQEQSQHQAGSRLSGGG-----GGDGKQRVDLSRVEHRRSREEDCRADSPXXXXXXXXXXX-XXXXXXXXXXXXXSTGKTNVVVSDTEAPDHLARAQAVAARAEKILQLRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTGLEDDEARHLAACYRKDFNGRSMVDYGRLFDNMEVQEGGVYGRGVTPSPGPSKSSGRGCWEDQQHSSSRDGGGGTRARSASVSAAGEXRRRGSRPMRAAAGGRTRHSQRRYWRRGVPDAADDNFVRGGAPAEASQLVRRARAKTLALLDRHGTRSVDCVFGLVDQAHTQTVNSGELREALRILGGSDTLSEIEHRALFKGISKGRDRIHYRDKTYPNTQRYSRGPAASVVATTCFIYTLFFGTPLVLHKQELLDTLRASEVAEHRERTQRKLQHQAGLPTSGRGSAIHWRHSDVLDWDAPPAGGGGRKGSRGVGLKGGRQHKESRRQALVFQRLRDGVKQIQEKQNSAWPVFDMFRQRGRARAGGYCDAAA 927          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11915.1634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB86_ECTSI0.000e+078.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLQ2_9PHAE0.000e+079.66EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 75..225
e-value: 2.5E-8
score: 36.0
NoneNo IPR availablePANTHERPTHR20875FAMILY NOT NAMEDcoord: 567..837
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 577..589
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 164..176
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 187..222
score: 6.34
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 163..186
score: 8.265
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 564..599
score: 5.754
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 750..785
score: 6.675
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 163..818

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11915contigEcto-sp13_S_contig11915:334..5247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11915.1634.1mRNA_Ecto-sp13_S_contig11915.1634.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11915 334..5247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11915.1634.1 ID=prot_Ecto-sp13_S_contig11915.1634.1|Name=mRNA_Ecto-sp13_S_contig11915.1634.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=935bp
MPDAGGIRRRASQGGSWEVELVGPMEVATSGLNDNVAQQQRPEINGTLDQ
IPRLMHKLHNDTNERTRSAHLTSSYRDQYLTRKEHQPISNQATCSTAAGS
PTRRDVPYDIGEYIIHSVPPPVPPPRALELVKEEVHRALKAFSTQPVKGE
PRAPLPSDLLRPFDVSKDGRVTYREFRTGILGLGIGLTAHEAEALAQVVD
RKGTGLVDRGQFETAATRDWGSGGRDGGWQGRPTSAPGRVPEAVGEPQTG
SGALHSPGEHANHTQADDRSKARDGEKERAGGEVLPPPPTPSGAPQPLRQ
WSRPETTGRPSRNRGPSTLSFDCWQQNANRRNDSSNAVDAVVANTPASTG
SSSARSDGNGRRERSRNTAGTSATPAAAGPKRSNNNYNTRNNNQQPSQKY
IQSLQTLRSLLQRDGVFDEVRSTPIADETNKSNRRSLSFGTETRGRRRER
RLQEQSQHQAGSRSSGGGGGGSGGSDGKQRVDLSRVEHRRSRGEDCRADS
PPLPDGAGANGDGRQQQQQRRAGGAASTGKTNVVVSDSEAPDHPAKARAV
AARAESILRLRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTG
LEDDEARHLAARYRKDFNGRSMVDYGRLFDNLEVQEGGLFGRGVTSSPGP
STSSGRGCWEDQQHSSSRDGGGGTRARSASLSAAGEGRRRGSRPMRAAAG
ARTRHSQRRCWRRGVPDAADDNFVRGGAPAETSQLVRRARAKTLALLDRH
GTPSVDCVFGLVDQAHTQTVNSGELREALRILGGSDTLSEIEHRALFKGI
SKGRDRVHYRELLGTLRASEVAEHRERTQRKLQQQAGLPTSGRGSAIHWR
HSDVLDWDAPPVGDGGRKGSGGVGLRGGRQHKESRRQALVFQRLRDGVRQ
IQEKQNSAGPVFDMFRQRGRGRVGGYGAAAATAAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair