prot_Ecto-sp13_S_contig5856.16344.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5856.16344.1
Unique Nameprot_Ecto-sp13_S_contig5856.16344.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length219
Homology
BLAST of mRNA_Ecto-sp13_S_contig5856.16344.1 vs. uniprot
Match: D7FSB5_ECTSI (Dice1/dead/H box polypeptide, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSB5_ECTSI)

HSP 1 Score: 386 bits (991), Expect = 6.900e-123
Identity = 199/207 (96.14%), Postives = 200/207 (96.62%), Query Frame = 0
Query:   13 HASLVAAFVIDTSASMSQKTSDGRSLLDHAKDMVEQLTVKSRHTPAHHVLLTNCLLLTTEEWPANVKTSWADWGDKPEKRLARFHEQLRNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVILITDGKNATAGTTADNGMAMXXXXXXXMPTAASMLSMEAIGQGASRAVGGELCGKPYRWDQRLFTVILGG 219
            HASLVAAFVIDTSASMSQKTSDGRSLLDHAKDMVEQLTVKSRHTPAHHVLLTNCLLLTTEE PAN+KTSWADWGDKPEKRLARFHEQLRNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVILITDG NATAG TADNGMAM XXXX  MPTAASMLSMEAIGQGAS AVGGELCGKPYRWDQRLFTVILGG
Sbjct:    9 HASLVAAFVIDTSASMSQKTSDGRSLLDHAKDMVEQLTVKSRHTPAHHVLLTNCLLLTTEECPANIKTSWADWGDKPEKRLARFHEQLRNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVILITDGNNATAGMTADNGMAMGXXXX--MPTAASMLSMEAIGQGASGAVGGELCGKPYRWDQRLFTVILGG 213          
BLAST of mRNA_Ecto-sp13_S_contig5856.16344.1 vs. uniprot
Match: A0A8J1Y828_OWEFU (Ofus.G19323 protein n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y828_OWEFU)

HSP 1 Score: 117 bits (292), Expect = 1.500e-26
Identity = 72/201 (35.82%), Postives = 103/201 (51.24%), Query Frame = 0
Query:   17 VAAFVIDTSASMSQKTSDGRSLLDHAKDMVEQLTVKSRHTPAHHVLLTNCLLLTTEEWPANVKTSWADWGDKPEKRLARFHEQLRNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVILITDGKNATAGTTADNGMAMXXXXXXXMPTAASMLSMEAIGQGASRAVGGELCGKPYRWDQRLFTVIL 217
            V  F++DTSASM+Q+T  G SLLD AK  VE         PA    +   +LLT E+ PAN+K  W +           F ++L+NLE  G +AV PSL  AF+LL  +R+  G+DT+G G+ P+  E   +I ITDG+  T+ T     + +                        +   G EL  +P+RWDQRLF+++L
Sbjct:    3 VIVFLVDTSASMNQRTYLGTSLLDVAKSAVETFMKFRSRDPASR--MDRYMLLTFEDPPANIKAGWKE-------SHTTFVDKLKNLEALGLSAVGPSLKHAFDLLNVNRMHLGIDTYGMGKCPYYLEPAVIICITDGRKLTSMTGVQQDLNLPMN---------------------TTVPGNELTKEPFRWDQRLFSIVL 173          
BLAST of mRNA_Ecto-sp13_S_contig5856.16344.1 vs. uniprot
Match: F4QCA2_CAVFA (Type A von Willebrand factor domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QCA2_CAVFA)

HSP 1 Score: 114 bits (286), Expect = 9.630e-26
Identity = 73/203 (35.96%), Postives = 108/203 (53.20%), Query Frame = 0
Query:   16 LVAAFVIDTSASMSQKTSDGRSLLDHAKDMVEQ-LTVKSRHTPAHHVLLTNCLLLTTEEWPANVKTSWADWGDKPEKRLARFHEQLRNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVILITDGKNATAGTTADNGMAMXXXXXXXMPTAASMLSMEAIGQGASRAVGGELCGKPYRWDQRLFTVIL 217
            ++  FV+DTS SM QKTS+G +LLD AK  +E  L ++S+ T           L+TTEE P  VK  W D           F ++L+NL+P+  + +  SL KAF+ L Q R+ S +D +G GR+PW  E   V+L+TDG     G    NG+                  ++ I    S+  GG+L  +PYRW+Q+LF+++L
Sbjct:    1 MLITFVVDTSGSMGQKTSNGMTLLDCAKAAIEHFLKIRSKDTQIFRN--DRYFLITTEECPQAVKIGWRD-------NFNSFLQELKNLQPKDLSNIPYSLVKAFDHLNQFRIQSLIDNYGLGRNPWFIEPAVVVLLTDG-----GAQNSNGL------------------LDNIQIPKSQLSGGDLTIEPYRWEQKLFSLVL 171          
BLAST of mRNA_Ecto-sp13_S_contig5856.16344.1 vs. uniprot
Match: A0A0B7AIB3_9EUPU (VWFA domain-containing protein n=2 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7AIB3_9EUPU)

HSP 1 Score: 112 bits (280), Expect = 5.970e-25
Identity = 75/201 (37.31%), Postives = 112/201 (55.72%), Query Frame = 0
Query:   17 VAAFVIDTSASMSQKTSDGRSLLDHAKDMVEQLTVKSRHTPAHHVLLTNCLLLTTEEWPANVKTSWADWGDKPEKRLARFHEQLRNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVILITDGKNATAGTTADNGMAMXXXXXXXMPTAASMLSMEAIGQGASRAVGGELCGKPYRWDQRLFTVIL 217
            +  F++DTSASM+Q+T  G +L+D AK  VE   +KSR   A+       +LLT E+ PANVK  W       E  L  F  +L+NL+  G +++  SL  AF+LL  +R++SG++T+G+GRSP+  E+  +I+ITDG + T                      AS + ME      S   G EL  +P+RWDQR+F+++L
Sbjct:    3 IILFLVDTSASMNQRTYLGTALIDVAKAAVESF-MKSRSRDANS-RWDRYMLLTFEDPPANVKAGWK------ESHLT-FASELKNLKAYGLSSMGSSLKHAFDLLNLNRMTSGIETYGQGRSPFYNESTVIIVITDGGHLTT---------------------ASGIQMELNLPMNSVVPGAELTKEPFRWDQRIFSLVL 173          
BLAST of mRNA_Ecto-sp13_S_contig5856.16344.1 vs. uniprot
Match: A0A2C9KGT4_BIOGL (VWFA domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KGT4_BIOGL)

HSP 1 Score: 111 bits (278), Expect = 8.270e-25
Identity = 74/201 (36.82%), Postives = 110/201 (54.73%), Query Frame = 0
Query:   17 VAAFVIDTSASMSQKTSDGRSLLDHAKDMVEQLTVKSRHTPAHHVLLTNCLLLTTEEWPANVKTSWADWGDKPEKRLARFHEQLRNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVILITDGKNATAGTTADNGMAMXXXXXXXMPTAASMLSMEAIGQGASRAVGGELCGKPYRWDQRLFTVIL 217
            +  F++DTSASM+Q+T  G +L+D AK  VE   +KSR            +LLT E+ PANVK  W +           F  +L+NL+  G +++ PSL  AF+LL  +R++SG+DT+G+GRSP+  E+  +I+ITDG + T      NG+                L M       S   G EL  +P+RWDQR+F+V++
Sbjct:    3 IILFLVDTSASMNQRTYLGTALIDVAKAAVENF-MKSRSRDGSS-RWDRYMLLTFEDPPANVKAGWKE-------SHMTFASELKNLKASGLSSLGPSLKHAFDLLNLNRMTSGIDTYGQGRSPFYNESTIIIVITDGGHLTT----PNGIQTELN-----------LPMN------SGIPGAELTKEPFRWDQRIFSVVM 173          
BLAST of mRNA_Ecto-sp13_S_contig5856.16344.1 vs. uniprot
Match: A0A3S1HCP7_ELYCH (VWFA domain-containing protein (Fragment) n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1HCP7_ELYCH)

HSP 1 Score: 111 bits (278), Expect = 1.140e-24
Identity = 74/201 (36.82%), Postives = 114/201 (56.72%), Query Frame = 0
Query:   17 VAAFVIDTSASMSQKTSDGRSLLDHAKDMVEQLTVKSRHTPAHHVLLTNCLLLTTEEWPANVKTSWADWGDKPEKRLARFHEQLRNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVILITDGKNATAGTTADNGMAMXXXXXXXMPTAASMLSMEAIGQGASRAVGGELCGKPYRWDQRLFTVIL 217
            +  F++DTSASM+Q+T  G +L+D AK  VE   +KSR   A+       +LLT E+ PANVK  W       E  L  F  +L+NL   G +++ PSL  AF+LL  +R++SG++T+G+GRSP+  E+  +I+ITDG + T      +G+                L M ++  GA      EL  +P+RWDQR+F++++
Sbjct:   48 IILFLVDTSASMNQRTYLGTALIDVAKAAVENF-MKSRSRDANS-RWDRYMLLTFEDPPANVKAGWK------ESHLT-FASELKNLRASGLSSLGPSLKHAFDLLNLNRMTSGIETYGQGRSPFYNESTVIIVITDGGHLTT----QSGIQSELN-----------LPMNSVVPGA------ELTKEPFRWDQRIFSLVM 218          
BLAST of mRNA_Ecto-sp13_S_contig5856.16344.1 vs. uniprot
Match: UPI001CF4FF6D (integrator complex subunit 6-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF4FF6D)

HSP 1 Score: 111 bits (277), Expect = 1.560e-24
Identity = 71/202 (35.15%), Postives = 106/202 (52.48%), Query Frame = 0
Query:   16 LVAAFVIDTSASMSQKTSDGRSLLDHAKDMVEQLTVKSRHTPAHHVLLTNCLLLTTEEWPANVKTSWADWGDKPEKRLARFHEQLRNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVILITDGKNATAGTTADNGMAMXXXXXXXMPTAASMLSMEAIGQGASRAVGGELCGKPYRWDQRLFTVIL 217
            ++  FV+DTSASM+Q+TS G +LLD AK+ VE  T   +   A        +L+T EE P  +K  W +         A F  +L+NL+  G + +  SL +AF+LL  +RL SG+D +G GR+P+  E   V+ ITDG   ++     NG+         +P   ++              G EL  +P+RWDQRLF++IL
Sbjct:   10 VIFVFVVDTSASMNQRTSVGTTLLDVAKNAVETFTKLRQRDQASRT--DRYMLVTLEEPPGAIKAGWRE-------NQATFMNELKNLQATGLSTLGTSLKEAFDLLNLYRLHSGIDNYGMGRNPFYVEPALVVCITDGSKLSS----QNGV----HEELHLPMHTTL-------------PGHELTTEPFRWDQRLFSIIL 181          
BLAST of mRNA_Ecto-sp13_S_contig5856.16344.1 vs. uniprot
Match: UPI000359CBCA (integrator complex subunit 6 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359CBCA)

HSP 1 Score: 109 bits (273), Expect = 5.200e-24
Identity = 73/201 (36.32%), Postives = 113/201 (56.22%), Query Frame = 0
Query:   17 VAAFVIDTSASMSQKTSDGRSLLDHAKDMVEQLTVKSRHTPAHHVLLTNCLLLTTEEWPANVKTSWADWGDKPEKRLARFHEQLRNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVILITDGKNATAGTTADNGMAMXXXXXXXMPTAASMLSMEAIGQGASRAVGGELCGKPYRWDQRLFTVIL 217
            +  F++DTSASM+Q+T  G +L+D AK  VE   +KSR   A        +LLT E+ PANVK  W       E  L  F  +L+NL   G +++ PSL  AF+LL  +R++SG++T+G+GRSP+  E+  +I+ITDG + T     ++G+                L M ++        G EL  +P+RWDQR+F++++
Sbjct:    3 IILFLVDTSASMNQRTYLGTALIDVAKAAVESF-MKSRSRDASS-RWDRYMLLTFEDPPANVKAGWK------ESHLT-FASELKNLRASGLSSLGPSLKHAFDLLNLNRMTSGIETYGQGRSPFYNESTIIIVITDGGHLTT----NSGIQTELN-----------LPMNSV------VPGTELTKEPFRWDQRIFSLVM 173          
BLAST of mRNA_Ecto-sp13_S_contig5856.16344.1 vs. uniprot
Match: A0A0T6B998_9SCAR (VWA domain-containing protein (Fragment) n=1 Tax=Oryctes borbonicus TaxID=1629725 RepID=A0A0T6B998_9SCAR)

HSP 1 Score: 102 bits (255), Expect = 7.120e-24
Identity = 66/203 (32.51%), Postives = 102/203 (50.25%), Query Frame = 0
Query:   17 VAAFVIDTSASMSQKTSDG--RSLLDHAKDMVEQLTVKSRHTPAHHVLLTNCLLLTTEEWPANVKTSWADWGDKPEKRLARFHEQLRNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVILITDGKNATAGTTADNGMAMXXXXXXXMPTAASMLSMEAIGQGASRAVGGELCGKPYRWDQRLFTVIL 217
            +  F+IDTSASM Q+T  G   +LLD AK  VE      + +P   +     +LLT EE P N+K  W +        LA F  +L+NL+      +  ++ +AF++L  +R++SG+DT+G+GR P+  E   ++LITDG   ++     NG+          P                   G EL  +P+RWDQR+F ++L
Sbjct:    3 IIVFLIDTSASMFQRTYVGGRTTLLDVAKSAVETFVKIRQKSPESRI--DRYMLLTFEEQPNNIKAGWKE-------NLATFMNELKNLQCYSMTTMGIAVKQAFDILNVNRMTSGIDTYGQGRCPYFLETSVIVLITDGGKLSS----VNGLHEEFNLPMNSPIP-----------------GSELTREPFRWDQRMFALVL 175          
BLAST of mRNA_Ecto-sp13_S_contig5856.16344.1 vs. uniprot
Match: A0A2B4SWW0_STYPI (Integrator complex subunit 6 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SWW0_STYPI)

HSP 1 Score: 108 bits (271), Expect = 9.290e-24
Identity = 67/202 (33.17%), Postives = 103/202 (50.99%), Query Frame = 0
Query:   16 LVAAFVIDTSASMSQKTSDGRSLLDHAKDMVEQLTVKSRHTPAHHVLLTNCLLLTTEEWPANVKTSWADWGDKPEKRLARFHEQLRNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVILITDGKNATAGTTADNGMAMXXXXXXXMPTAASMLSMEAIGQGASRAVGGELCGKPYRWDQRLFTVIL 217
            ++  FV+DTSASM+Q+TS G +LLD AK+ VE  T   +   A        +L+T EE P  +K  W +           F  +LRNL+  G + +  +L +AF+LL  +RL SG+D +G GR+P+  E   V+ ITDG   ++ +   + + +                        +   G EL  +P+RWDQRLF++IL
Sbjct:    2 VIFVFVVDTSASMNQRTSIGTTLLDVAKNAVETFTKLRQRDQASRT--DRYMLVTLEEPPGAIKAGWRE-------NQVTFMSELRNLQANGLSTLGTALKEAFDLLNLYRLHSGIDNYGMGRNPFFVEPAMVVCITDGSKLSSQSGVQDELHLPMH---------------------TTLPGHELTTEPFRWDQRLFSIIL 173          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5856.16344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSB5_ECTSI6.900e-12396.14Dice1/dead/H box polypeptide, putative n=1 Tax=Ect... [more]
A0A8J1Y828_OWEFU1.500e-2635.82Ofus.G19323 protein n=2 Tax=Owenia fusiformis TaxI... [more]
F4QCA2_CAVFA9.630e-2635.96Type A von Willebrand factor domain-containing pro... [more]
A0A0B7AIB3_9EUPU5.970e-2537.31VWFA domain-containing protein n=2 Tax=Arion vulga... [more]
A0A2C9KGT4_BIOGL8.270e-2536.82VWFA domain-containing protein n=1 Tax=Biomphalari... [more]
A0A3S1HCP7_ELYCH1.140e-2436.82VWFA domain-containing protein (Fragment) n=1 Tax=... [more]
UPI001CF4FF6D1.560e-2435.15integrator complex subunit 6-like n=2 Tax=Acropora... [more]
UPI000359CBCA5.200e-2436.32integrator complex subunit 6 n=1 Tax=Aplysia calif... [more]
A0A0T6B998_9SCAR7.120e-2432.51VWA domain-containing protein (Fragment) n=1 Tax=O... [more]
A0A2B4SWW0_STYPI9.290e-2433.17Integrator complex subunit 6 n=1 Tax=Stylophora pi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type APFAMPF13519VWA_2coord: 19..155
e-value: 1.1E-8
score: 35.7
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410coord: 17..197
e-value: 4.0E-8
score: 35.4
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 19..159
NoneNo IPR availablePANTHERPTHR12957:SF2INTEGRATOR COMPLEX SUBUNIT 6coord: 19..217
NoneNo IPR availablePANTHERPTHR12957DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATEDcoord: 19..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5856contigEcto-sp13_S_contig5856:194..1863 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5856.16344.1mRNA_Ecto-sp13_S_contig5856.16344.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5856 194..3303 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5856.16344.1 ID=prot_Ecto-sp13_S_contig5856.16344.1|Name=mRNA_Ecto-sp13_S_contig5856.16344.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp
MSQQQQQQQQQQHASLVAAFVIDTSASMSQKTSDGRSLLDHAKDMVEQLT
VKSRHTPAHHVLLTNCLLLTTEEWPANVKTSWADWGDKPEKRLARFHEQL
RNLEPRGQNAVAPSLGKAFELLGQHRLSSGVDTWGKGRSPWRTEAGAVIL
ITDGKNATAGTTADNGMAMGMGIGMGMPTAASMLSMEAIGQGASRAVGGE
LCGKPYRWDQRLFTVILGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf