prot_Ecto-sp13_S_contig585.16331.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig585.16331.1
Unique Nameprot_Ecto-sp13_S_contig585.16331.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length827
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig585.16331.1 vs. uniprot
Match: A0A6H5JBR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBR8_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.570e-40
Identity = 205/222 (92.34%), Postives = 206/222 (92.79%), Query Frame = 0 
Query:   17 GTAGTKQRLYCFAHKLEGLVNNHRKECAQPGCTTVSTYGYESTRGRKVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAVRGKPEYCFAHHLEGMEDVRNKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVQNRXXXXXXXXXXXXXXXGCPRKEALXXXXXXXXXXXSVERNHXXXXXXXXXXXXXXXXXXXXEFCGRHATKDMIGVARPCM 238
            G AGTKQRLYCF HK EGLVNNHRKECAQPGCTT STYGYEST GR    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAVRGKPEYCFAHHLEGMEDVRNKK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAV N XXXXXXXXXXXXXXX CPRKEALXXXXXXXXXX S+ER  XXXXXXXXXXXXXXXXXXXXEFCGRHATKDMIGVARPCM
Sbjct:   43 GAAGTKQRLYCFTHKPEGLVNNHRKECAQPGCTTGSTYGYESTSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAVRGKPEYCFAHHLEGMEDVRNKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVHNHXXXXXXXXXXXXXXXXCPRKEALXXXXXXXXXXISLERXXXXXXXXXXXXXXXXXXXXXXEFCGRHATKDMIGVARPCM 264
[Close]
BLAST of mRNA_Ecto-sp13_S_contig585.16331.1 vs. uniprot
Match: D7FZC4_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZC4_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 1.740e-25
Identity = 63/100 (63.00%), Postives = 71/100 (71.00%), Query Frame = 0 
Query:  727 DKPWMVRIVRKLGSRNGRSMPEAMGAGEGVKRELCDGDAVSEAGMDEHDVAERGREMASLILNDGGSAQGTSALVSPFMGCIKRRRMMDAPTTGATTGKL 826
            DKPWMVR+ RK GSRNG SMPE   AGE VK ELCDGD  SEAG+DEHDVAER  E+A + L+   S +    L  PFMGC KRR+MMDA +T  TTG L
Sbjct:  498 DKPWMVRVFRKFGSRNGGSMPEVKEAGENVKAELCDGDVASEAGIDEHDVAERRPEVAPVPLDGCRSTRSNPVLTPPFMGCGKRRKMMDATSTLPTTGIL 597
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig585.16331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBR8_9PHAE1.570e-4092.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZC4_ECTSI1.740e-2563.00EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZC4... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig585contigEcto-sp13_S_contig585:6032..17672 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig585.16331.1mRNA_Ecto-sp13_S_contig585.16331.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig585 5900..18949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig585.16331.1 ID=prot_Ecto-sp13_S_contig585.16331.1|Name=mRNA_Ecto-sp13_S_contig585.16331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=827bp
MVRECMHPDCKKEPTFGTAGTKQRLYCFAHKLEGLVNNHRKECAQPGCTT
VSTYGYESTRGRKVAEYCSKHALQGMVCVTNKRCAHPACLKQPTYGMAVR
GKPEYCFAHHLEGMEDVRNKKRCAHPGCGKHPSKGVAGSKVAEYCGPHAK
EGMVAVQNRCRHSGCPKKASFGVAGCPRKEALFCKPHAKEGMVSVERNHC
QHQGCYGVAAYGTYGSEKKEFCGRHATKDMIGVARPCMKAGCATARSYGA
PGSKAPRFCPQHASEGMVDLSKNSCGQPGCLLVPSFSVSGSTPATFCRRH
ATEGMIKIPNKSHRVCEYPDCVRRACHGVPGSNDPKFCRQHAEEGTTNLF
HKICKHQNCVTSASYGAQGSTKVQFCAKHAEDGMVNVSLKRCGYSGCSGP
ARFGTVGTKKAKFCPTHASEGMVDLSKNSCGQPGCLLVPVFSASGSAPAT
FCRRHATEEMTRIPNKSHRVCEYPDCVRRACRGVPGSKDPKFCRQHAEEG
MTDLLHKICEHPSCVTSASYGAKGSRKAQFCAKHRGEGMVNVAHRRCGYS
GCSGLARFGTVGTKKAELCPTHAGEGMVDMKKGTCVHPGCSARAKFAEAG
SDKAEHCRQHAREGAVDVVSKGCAHPGCTKFPSYGAVGSKMPLFCGPHAT
DGMVSVRGLRCSHPSCDEWPSFGRAGNKKGEFCGRHATQGMVHIRREKCS
SPGCTLLPIFGVRGTSKAEVCTRHARDKPWMVRIVRKLGSRNGRSMPEAM
GAGEGVKRELCDGDAVSEAGMDEHDVAERGREMASLILNDGGSAQGTSAL
VSPFMGCIKRRRMMDAPTTGATTGKL*
back to top