mRNA_Ecto-sp13_S_contig5845.16325.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5845.16325.1 vs. uniprot
Match: D8LCM6_ECTSI (Methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM6_ECTSI) HSP 1 Score: 665 bits (1716), Expect = 1.270e-235 Identity = 346/374 (92.51%), Postives = 352/374 (94.12%), Query Frame = 1
Query: 430 MAFRFGSAILVRGGLLQHSNLPAATGVRTRLAFST-GAIDKGGDDAAVQEENKAKINAAWNSSAETYVGNIQDSAS-ASLKVSSGMNVGYKLATRIVASPYDKVQPKEPGKQVVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAVEEGVPNVVASVADGEALTGFGDESVDAVTCTWGLLFMPNWPRAIQEFSRVLKRDGVVAVTLWERQEGSVFQRMRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMKTAGLCDVSASKFSVPVVLSADARPRDIWEHYTQSSPLGQTMSTLEKKGRTNIRQEAMDIFEDAMNKEWAEGRAPLGLQKEDDDLASGSSPAASRPPRIYFVRALVVVGRKVGG 1545
MA RFGSA+LVR GLL SNLPAA GVRTRLAFST GA KGGDDAAVQEENKAKINAAWNSSAE YVGN+QD AS ASLKVSSGMNVGYKLATRIV SPYDKVQPKEPGKQVVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRA EEGV NVVASVADGEALTGFGD SVDAVTCTWGLLFMPNW RAIQEFSRVLKRDGVVAVTLWERQEGSVFQRMRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMK AGLCDVSASKFSVPVVLSADARPRDIWEHYT+SSPLGQTMSTLEKKGRTN+RQEAMDIFEDAMNKEW EGR PLGLQKEDD +A GSSPAASRPPRIY+VRALVVVGRK GG
Sbjct: 1 MALRFGSAVLVRSGLLHRSNLPAARGVRTRLAFSTVGATAKGGDDAAVQEENKAKINAAWNSSAEAYVGNVQDGASSASLKVSSGMNVGYKLATRIVTSPYDKVQPKEPGKQVVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAAEEGVSNVVASVADGEALTGFGDGSVDAVTCTWGLLFMPNWQRAIQEFSRVLKRDGVVAVTLWERQEGSVFQRMRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMKAAGLCDVSASKFSVPVVLSADARPRDIWEHYTESSPLGQTMSTLEKKGRTNVRQEAMDIFEDAMNKEWVEGRTPLGLQKEDDAVAGGSSPAASRPPRIYYVRALVVVGRKTGG 374
BLAST of mRNA_Ecto-sp13_S_contig5845.16325.1 vs. uniprot
Match: A0A6H5JCB5_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCB5_9PHAE) HSP 1 Score: 512 bits (1319), Expect = 3.130e-175 Identity = 295/407 (72.48%), Postives = 308/407 (75.68%), Query Frame = 1
Query: 430 MAFRFGSAILVRGGLLQHSNLPAATGVRTRLAFSTGAIDKGGDDAAVQEENKAKINAAWNSSAETYVGNIQDSAS-ASLKVSSGMNVGYKLATRIVASPYDKVQPKEPGKQVVLDVASAGGEPAITIAKA--------MPGATVHATDFAPAMMDLIRKRAVEEGVPNVVASVADGEALTGFGDESVDAVTCTWGLLFMPNWPRAIQEFSRVLKRDGVVAVTLWERQEGSVFQRMRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMKTAGLCDVSASKFSVPVVLSADA-----------RP--RDIWEHY----------TQSSPLG---QTMSTLEKKGRTNIRQEAMDIFEDAMNKEWAEGRAPLGLQKEDDDLASGSSPAASRPPRIYFVRALVVVGRKVGG 1545
MA R GSA+LVRGGLLQ SN PAATGVR RLAFSTGA +KGGDDAAVQEENKAKINAAWNSSAE YV NIQD AS ASLKVSSGMNVGYKLATRIV SPYDKVQPKEP KQVVLDVASAGGEPAITIAKA MPGAT+HATDFAP M+DLIRKRAVEEGV NVVASVADGEALTGFGDE+VDAVTCTWGLLFMPNW RAIQE GSVFQR+RNVVETLVPGFQLLIDAEALGEDGGSAVVEEMK + + + LS + RP R W T +P QTMSTLEKKGRTNIRQEAMDIFED+MNKEWAEGR PLGLQ E DDLA GSSP ASRPPRIY+VRALVVVGRKVGG
Sbjct: 1 MALRLGSAVLVRGGLLQRSNFPAATGVRIRLAFSTGAKNKGGDDAAVQEENKAKINAAWNSSAEAYVRNIQDGASSASLKVSSGMNVGYKLATRIVTSPYDKVQPKEPEKQVVLDVASAGGEPAITIAKAREGIYRKAMPGATIHATDFAPVMIDLIRKRAVEEGVSNVVASVADGEALTGFGDETVDAVTCTWGLLFMPNWQRAIQE--------------------GSVFQRIRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMKASWTSPRTTGAIKPWLTLSIGSSFRLPGSATSRRPSFRCPWSSRPTRGLGTSGSTTPNPRHSGQQTMSTLEKKGRTNIRQEAMDIFEDSMNKEWAEGRTPLGLQNEGDDLAGGSSPTASRPPRIYYVRALVVVGRKVGG 387
BLAST of mRNA_Ecto-sp13_S_contig5845.16325.1 vs. uniprot
Match: I0Z1C2_COCSC (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z1C2_COCSC) HSP 1 Score: 124 bits (311), Expect = 5.150e-28 Identity = 88/289 (30.45%), Postives = 141/289 (48.79%), Query Frame = 1
Query: 598 AAWNSSAETYVGNIQDSASASLKVSSGMNVGYKLATRIVASPYDKVQPKEPGKQVVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAVEEGVPNVVASVADGEALTGFGDESVDAVTCTWGLLFMPNWPRAIQEFSRVLKRDGVVAVTLW-ERQEGSVFQRMRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMKTAGLCDVSASKFSVPVVLSADARPRDIWEHYTQSSPLGQTMSTLEKKGRTNIRQEAMDIFEDAMNKEWAEGRAPLGLQKEDDDLA 1461
AAW +SAE Y ++ + G + ++A+ + + + G +LDVAS GEP I++AK PG TV TD A M+ + RA + N +VADGE L+ FGD + D VTC GL+FMPN+ RA+ EF RVLK DG+ V+ W E ++ +V M V + P L D LG ++ ++ AG + S + +VP+ P++ Q+ + + + L ++G ++ A DA K+ GL +E+ +++
Sbjct: 14 AAWGNSAEQYAADVHE--------------GAGIMMPLIAAYVETAKEEVKGNPQILDVASGTGEPGISLAKLFPGGTVTITDIAEGMIAGAKGRADRLSLKNARFAVADGENLSQFGDATFDVVTCNAGLMFMPNYERALAEFRRVLKPDGLAMVSAWGEEEQTNVASLMLAVQRAVAPNDSLFADPNILGSR--EKLLHSLERAGFSNNSCREVNVPMRF-----PKEKVRGMLQNPVIAELLDRLIERGEKDVADSAHGALLDAAAKK--------GLLQENGEIS 273
BLAST of mRNA_Ecto-sp13_S_contig5845.16325.1 vs. uniprot
Match: A0A835YPT1_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPT1_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.250e-26 Identity = 91/290 (31.38%), Postives = 133/290 (45.86%), Query Frame = 1
Query: 742 KEPGKQVVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAV----EEGVPNVVASVADGEA-------------------LTGFGDESVDAVTCTWGLLFMPNWPRAIQEFSRVLKRDGVVAVTLW------------------ERQEGSVFQRMR---------NVVETLVPG----------------------FQLLIDAEALG--EDGGSAVVEEMKTAGLCDVSASKFSVPVVLSADARPRDIWEHYTQSSPLGQTMSTLEKKGRTNIRQEAMDIFE 1389
K G VLDVASA GEPA++IA+ +P ATVHATD++P M++ + R EG+ NV VADGE+ L+ F D S+DA+TC++G++FMP W +AI+EF RVLK +G+ + +W + V R+R N PG F++L++ +LG G VV+EM+ AG + F V V A A + W + +P T+ LE++GR I +A +FE
Sbjct: 71 KGDGPPSVLDVASAAGEPAVSIARLLPQATVHATDYSPGMVEALNTRVAVLRETEGLANVHTGVADGESDILTLLCAVVAACICRAQNLSQFEDASMDAITCSFGIMFMPAWQKAIREFYRVLKPNGIAIINVWGPEQEAQRCACIRLWLLPQHNANDVRSRIRPPPQCHLVSNSSANRCPGLLQRSPSHMPDENITHVFVITDFKVLLNPCSLGGGHPHGQHVVDEMQKAGFVQMQHMFFEVQV---AAASLDEAWHRHLLGTPFAATLQALERQGRPRIHADARALFE 357
BLAST of mRNA_Ecto-sp13_S_contig5845.16325.1 vs. uniprot
Match: I0Z1C3_COCSC (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z1C3_COCSC) HSP 1 Score: 112 bits (281), Expect = 2.000e-24 Identity = 73/224 (32.59%), Postives = 111/224 (49.55%), Query Frame = 1
Query: 601 AWNSSAETYVGNIQDSASASLKVSSGMNVGYKLATRIVASPYDKVQPKEPGKQVVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAVEEGVPNVVASVADGEALTGFGDESVDAVTCTWGLLFMPNWPRAIQEFSRVLKRDGVVAVTLWERQEGS-VFQRMRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMKTAGLCDVSASKFSVPVVLSAD 1269
AW + AE Y N+ + G + ++A+ + + + G ++LDVAS GEP I++A+ P +V TD A M+ + RA V N VAD E L+ F D + D VTC GL+FMPN+ RA+ EF RVLK DG+ ++ W E + + M + + P L D LG +V ++ AG +VS + +VP+ + AD
Sbjct: 15 AWGNGAELYAANLHE--------------GSGIMMPLIAAYAETARAEVKGNPLILDVASGTGEPGISLARQFPNGSVIMTDLADGMIAGAKGRAERLSVKNASFDVADAEDLSQFKDATFDVVTCNCGLMFMPNYERALAEFRRVLKPDGLALMSAWGLPEHTQLISLMLGMQAAVAPNDSLFADPNILGSR--EKLVHAVERAGFSNVSCREVNVPMHIPAD 222
BLAST of mRNA_Ecto-sp13_S_contig5845.16325.1 vs. uniprot
Match: A0A8J9RMN2_9CHLO (Probable ubiquinone/menaquinone biosynthesis C-methyltransferase Ub at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RMN2_9CHLO) HSP 1 Score: 106 bits (265), Expect = 7.670e-22 Identity = 77/286 (26.92%), Postives = 136/286 (47.55%), Query Frame = 1
Query: 541 IDKGGDDAAVQEENKAKINAAWNSSAETYVGNIQDSASASLKVSSGMNVGYKLATRIVASPYDKVQPKEPGKQVVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAVEEGVPNVVASVADGEALTGFGDESVDAVTCTWGLLFMPNWPRAIQEFSRVLKRDGVVAVTLWERQEGS-VFQRMRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMKTAGLCDVSASKFSVPVVLSADARPRDIWEHYTQSSPLGQTMSTLEKKGRTNIRQEAMDIFEDA 1395
+ K +++ +E +A +W SA+ Y ++ + G + ++ + D + + G +LD+AS GEP + +AK P V TD A M+ ++RA GV N +VAD E L+ +GD + D VTC GL+FMPN+ RA+ EF RVLK G+ +++W E + + MR++ + P D LG ++ ++ AG S + +VP+ + + R ++ H ++ + + + L K+G ++ A DA
Sbjct: 1 MSKANENSTAYKETQAT---SWGKSAQQYATDVHE--------------GSGIMMPLIGAYVDTAREEVKGSPQILDIASGSGEPGLQLAKLFPDGRVTMTDLAEGMIIEAKRRADLHGVKNASFAVADAEDLSHYGDATFDVVTCNCGLMFMPNYERALSEFRRVLKPGGLAMLSVWGLPEHTQLISLMRDMQTAIAPEDSFFADPNVLG--CREKLLHAVQHAGFSTSSCREVNVPMHVPGE-RVQNALLH---NAVIAELLERLVKRGDPDVADRAAAALLDA 263
BLAST of mRNA_Ecto-sp13_S_contig5845.16325.1 vs. uniprot
Match: A0A2P6TSJ3_CHLSO (Methyltransferase type 11 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSJ3_CHLSO) HSP 1 Score: 105 bits (262), Expect = 2.140e-21 Identity = 53/112 (47.32%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 763 VLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAVEEGVPNVVASVADGEALTGFGDESVDAVTCTWGLLFMPNWPRAIQEFSRVLKRDGVVAVTLWERQEGSVF 1098
+LDVASA GEPA+T+A A+P A + +TD A A ++L + RA G+ NV AD E L +GD S DAVTC+ GL+FMP++ A++EF+RVLK G+ A +W+ ++ + F
Sbjct: 57 ILDVASASGEPALTLAVALPQAQLVSTDLAHAFLELGKSRAARAGLTNVSFETADAEDLHRYGDASFDAVTCSLGLMFMPSFELAVKEFARVLKPGGLFAAAVWQSEDRAPF 168
BLAST of mRNA_Ecto-sp13_S_contig5845.16325.1 vs. uniprot
Match: A0A5J4Y136_9CHLO (Methyltransf_11 domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y136_9CHLO) HSP 1 Score: 107 bits (268), Expect = 6.060e-21 Identity = 75/213 (35.21%), Postives = 113/213 (53.05%), Query Frame = 1
Query: 763 VLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAVEEGVPNVVASVADGEALTGFGDESVDAVTCTWGLLFMPNWPRAIQEFSRVLKRDGVVAVTLWERQEGSVFQRMRNVVETLVPGFQLLIDAEALGEDGGSAV--VEEMKTAGLCDVSASKFSVPVVLSADARPRDIWEHYTQSSPLGQTMSTLEK---KGRTNIRQEAMDIF 1386
VLD+AS G PA+ + +A+P A+V ATD +PA + LI + A EGV NV A AD + L F D + DAVTC++GL+FMP+ +A+QE RVLK G+ T+W E F +M + V + G Q + G+ V ++++K A + + +S P+ D+ Q P GQ+ S L+K G+ N+ EA +
Sbjct: 295 VLDLASNAGSPAVPLGQAIPNASVVATDLSPASVSLISEYAASEGVTNVTAQPADAQHLQEFDDNTFDAVTCSYGLMFMPDHQKALQEAHRVLKLGGLYVATVWAPLEHYQFGQMFSEVARRIAGDQGPPPSPYTPWRFGNPVQLLQDLKGAHFSNAHCTAYSHPMTFPL----ADLVAF--QLGPNGQSRSLLDKLKATGKENMYDEAPQVM 501
BLAST of mRNA_Ecto-sp13_S_contig5845.16325.1 vs. uniprot
Match: A0A8J9WLC3_9CHLO (Probable demethylmenaquinone methyltransferase at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WLC3_9CHLO) HSP 1 Score: 99.8 bits (247), Expect = 1.680e-19 Identity = 61/174 (35.06%), Postives = 92/174 (52.87%), Query Frame = 1
Query: 751 GKQVVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAVEEGVPNVVASVADGEALTGFGDESVDAVTCTWGLLFMPNWPRAIQEFSRVLKRDGVVAVTLW-ERQEGSVFQRMRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMKTAGLCDVSASKFSVPVVLSAD 1269
G +LD+AS GEP ++AKA P V TDFA M+ ++RA + V N +VAD E L F S D +TC L+ MPN+ RA+ EF RVLK DG++ + +W Q+ + M++V + P D +L G V+ ++ AG +S + +VP+ L +
Sbjct: 50 GSPKILDIASGTGEPGFSLAKAYPEGHVFITDFAEGMIAGAKERADKHAVRNASFAVADAEDLKQFEISSFDILTCNSALMAMPNYDRALLEFHRVLKPDGLLMIGVWGSPQQTQMINLMQDVRAAVAPNDSFFADPSSLC--GHDKVLHALQQAGFSHISIREINVPMRLPVE 221
BLAST of mRNA_Ecto-sp13_S_contig5845.16325.1 vs. uniprot
Match: A0A835YK25_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK25_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.640e-19 Identity = 74/253 (29.25%), Postives = 118/253 (46.64%), Query Frame = 1
Query: 574 EENKAKINAAWNSSAETYVGNIQDSASASLKVSSGMNVGYKLATRIVASPYD--KVQPKEPGKQVVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAVE----EGVPNVVASVADGEA---------------------------------------------------LTGFGDESVDAVTCTWGLLFMPNWPRAIQEFSRVLKRDGVVAVTLW-ERQEGSV-FQRMRNVVETLVPGFQLLID 1155
+E KA+ A+ S+A TY+G+ + A + V K+ ++ D K +LD+A+A GEP++T+AK MP A + ATD++ M++ +R R + +G+ NV VADGE+ L+ F D S+D VTCT GL+FMPNW +AI E RVLK +G+ T+W ++E S + R V++ + PG+++ +D
Sbjct: 8 DERKARAAEAFGSAASTYLGDSKWKAPMTPMYVRAAEVVTKVVAEQHSTSCDGTSADDKSQWTPTILDIAAASGEPSVTLAKIMPRAKIIATDYSAGMIEAMRARIAKLRDSDGIANVHVDVADGESXXXXXXXXXXXXXXXXXXXXXXXAADAGRPFDXXXXFVAHTQPDSMPQQANLSQFEDNSMDIVTCTLGLMFMPNWQKAIAEAYRVLKPNGLYLATVWGPKEEASERYSLTRGVIDAIAPGYKMPMD 260 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5845.16325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5845.16325.1 >prot_Ecto-sp13_S_contig5845.16325.1 ID=prot_Ecto-sp13_S_contig5845.16325.1|Name=mRNA_Ecto-sp13_S_contig5845.16325.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=373bp MAFRFGSAILVRGGLLQHSNLPAATGVRTRLAFSTGAIDKGGDDAAVQEEback to top mRNA from alignment at Ecto-sp13_S_contig5845:517..8381- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5845.16325.1 ID=mRNA_Ecto-sp13_S_contig5845.16325.1|Name=mRNA_Ecto-sp13_S_contig5845.16325.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7865bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5845:517..8381- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5845:517..8381- >mRNA_Ecto-sp13_S_contig5845.16325.1 ID=mRNA_Ecto-sp13_S_contig5845.16325.1|Name=mRNA_Ecto-sp13_S_contig5845.16325.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1119bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5845:517..8381- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |