prot_Ecto-sp13_S_contig5842.16321.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5842.16321.1 vs. uniprot
Match: D7FNE3_ECTSI (Similar to zinc finger CCCH-type containing 12C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE3_ECTSI) HSP 1 Score: 358 bits (920), Expect = 1.080e-111 Identity = 297/694 (42.80%), Postives = 310/694 (44.67%), Query Frame = 0
Query: 14 PKMMSVVEAAAKSGDPVAAQEAREAVDGITIEQSGAAGGHAEGTSLETSGPTPEELHGETGHSLQTASSVQRNDGDHGIGNNGNDGRTGSDIGTEGTGESAASHDPPLLQPAAEADQEAYLTGGRDERLTWKRSPSGGXXXXXXXSFPLPLETPANDVSTSADGIGGVAGDHASTDTKGKCQGGQEEPLPTRSGGVVRARWRARWGPPPPEPVQRSRFSAPVDGGGDRPRXXXXXXXXXXXXXXXXXXXXXXXEKGREQEDRHLPLRVPSPPSSRLSARIDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQEDLHIPLQAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPRXXXXXXXXXXXXXXXXXAKLQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSSIPRXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAGKGKKRQRPGEGGSWSGGKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTCGXXXXXXXXXXXXXXXXXQEGDTTAPQARREVAATGGGG--VLGAQSSPAGDFGGGSSQGPLEGSSHNDCKRRCNTVPPTAVGCTSTNAVSASPGTTLVAIDGSNVAFAFSDGSMGEKRWSFRGPSAAIQFFKRRGIPCVIFVPNWRMSTLTRNDECYPEFEEALRSGEICRVPANKNDDLFILR 705
PKMMSVVEAAA SGDPVAAQEAREAVDGITIEQSGAAGGHAEGTS+ETSGPT EEL GETGH LQTA+SVQ NDG +G GNNG+DGR GSDIGTEGT +SA HDPPLL AAEADQEAYLT GRDERLTWKRSPSG XXXXXXX P G G + PP X + +D + R+ GE G G +R TCG XXXXXXXXXQEGDTTAPQARRE VLGA PAGD+GGGSSQGPLE SSHND KRRCN VPP A GCTS+NAVSASPGTTLVAIDGSNVAFAFSDGSMGEKRWSFRGPSAAIQFFKRRGIPCVIFVPNWRMSTLTRNDECYPEFEEALRSGEICRVPANKNDDLFILR
Sbjct: 88 PKMMSVVEAAANSGDPVAAQEAREAVDGITIEQSGAAGGHAEGTSIETSGPTLEELQGETGHPLQTAASVQSNDGHNG-GNNGSDGRAGSDIGTEGTRDSAVLHDPPLLLLAAEADQEAYLTAGRDERLTWKRSPSGXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------XXXXXXXRPEGGSGXXXQ----------------------------------------PPGXXXXXXXXXX-------------------------------DNDD---------------------------------------------------------------------------------------------------------------------------------------------RGRRWSGESGQGQGDRR-------------------------------TCGDQEAGERGXXXXXXXXXQEGDTTAPQARREXXXXXXXXXXVLGAHGRPAGDYGGGSSQGPLEDSSHNDRKRRCNAVPPAAAGCTSSNAVSASPGTTLVAIDGSNVAFAFSDGSMGEKRWSFRGPSAAIQFFKRRGIPCVIFVPNWRMSTLTRNDECYPEFEEALRSGEICRVPANKNDDLFILR 485
BLAST of mRNA_Ecto-sp13_S_contig5842.16321.1 vs. uniprot
Match: A0A6H5J5R4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5R4_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 7.850e-20 Identity = 84/131 (64.12%), Postives = 89/131 (67.94%), Query Frame = 0
Query: 468 VAGKGKKRQRPGEGGSWSGGKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTCGXXXXXXXXXXXXXXXXXQEGDTTAPQARREVAATGGGGVLGAQSSPAGDFGGGSSQGPLEGSSHNDCKRRCNTVP 598
+AG GKKRQRP EGGSWSGG+ PXXXXXXXXXXXXXXXXXX R G +GDT APQARRE AA G GGVLGA S AG++GGGSSQGPLEGSSHND KRRCNTVP
Sbjct: 1 MAGTGKKRQRP-EGGSWSGGQPPXXXXXXXXXXXXXXXXXX-----------RWSGERG---------------QGDTMAPQARREAAAAGSGGVLGAHSRRAGEYGGGSSQGPLEGSSHNDGKRRCNTVP 104
BLAST of mRNA_Ecto-sp13_S_contig5842.16321.1 vs. uniprot
Match: A0A6H5JA30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA30_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 5.450e-14 Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 0
Query: 14 PKMMSVVEAAAKSGDPVAAQEAREAVDGITIEQSGAAGGHAEGTSLETSGP 64
PKM SVVEAAA SGDPVAAQEARE VDGITIEQSGAAGG++EGTSLETS P
Sbjct: 69 PKMTSVVEAAADSGDPVAAQEAREVVDGITIEQSGAAGGYSEGTSLETSCP 119
BLAST of mRNA_Ecto-sp13_S_contig5842.16321.1 vs. uniprot
Match: A0A6H5KK30_9PHAE (RNase NYN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK30_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 1.930e-8 Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 0
Query: 619 VAIDGSNVAFAFSDGSMGEKRWSFRGPSAAIQFFKRRGIPCVIFVPNWRMSTLTRNDECYPEFEEALRSGEICRVPANKNDDLFILR 705
V IDG++VA G+ G+ WS +G AIQFF+RRG+PCV F+P RM+ ++ D C F+EA G I +P + DL IL+
Sbjct: 664 VVIDGNDVALCHR-GAHGQ--WSAQGALLAIQFFERRGVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAINEIPRGEKADLSILK 747 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5842.16321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig5842.16321.1 ID=prot_Ecto-sp13_S_contig5842.16321.1|Name=mRNA_Ecto-sp13_S_contig5842.16321.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=706bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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