prot_Ecto-sp13_S_contig584.16315.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig584.16315.1
Unique Nameprot_Ecto-sp13_S_contig584.16315.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length156
Homology
BLAST of mRNA_Ecto-sp13_S_contig584.16315.1 vs. uniprot
Match: D8LMP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP1_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 5.150e-47
Identity = 87/136 (63.97%), Postives = 102/136 (75.00%), Query Frame = 0
Query:    1 MKLKGDHGFLLALAISPTSRLVFAQRAGGGLPSAAHHGLKRFAEEDIADAGVGDVYPIDGDDQQGGQDLVDVLEADDQTTVVGDIELGELLCDSLNDAPGASLLRFTISSDTTVIAECTSYSSIDGSVLPDGNTAR 136
            MKL G + FLLAL +       FAQ  GG +PSA  +GL RFAEED+ D GVG V+PI  D+ Q  ++LV+VLE D+ TTVVGDIELG+LLCDSL DA  +SLLRFTISS  TVIAE TSYSSIDGS+LPDGNT +
Sbjct:    1 MKLAGSYCFLLALCVFLADHFSFAQPTGGRVPSAPRYGLARFAEEDVKDTGVGHVHPIPEDEHQVEEELVEVLETDELTTVVGDIELGDLLCDSLEDASDSSLLRFTISSTETVIAERTSYSSIDGSILPDGNTRK 136          
BLAST of mRNA_Ecto-sp13_S_contig584.16315.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 8.000e-40
Identity = 83/136 (61.03%), Postives = 98/136 (72.06%), Query Frame = 0
Query:    1 MKLKGDHGFLLALAISPTSRLVFAQRAGGGLPSAAHHGLKRFAEEDIADAGVGDVYPIDGDDQQGGQDLVDVLEADDQTTVVGDIELGELLCDSLNDAPGASLLRFTISSDTTVIAECTSYSSIDGSVLPDGNTAR 136
            MKL G + FLLAL +     L FAQ  GG  PSA  +GL RFAEED+ D GVG ++ I  D+ Q  + LV+VLE D+ T V+GDIELG+LLCDSL DA  +SLLRFTISS  TVIAE TSYSSIDG+VLPDGN  +
Sbjct:   87 MKLAGSYCFLLALCVFLADHLAFAQPTGGRAPSALRYGLARFAEEDVKDTGVGHLHAIPEDEHQVEEGLVEVLETDELTAVMGDIELGDLLCDSLEDATDSSLLRFTISSTETVIAERTSYSSIDGNVLPDGNARK 222          
BLAST of mRNA_Ecto-sp13_S_contig584.16315.1 vs. uniprot
Match: D8LLU0_ECTSI (PKD domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU0_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 1.340e-34
Identity = 75/136 (55.15%), Postives = 95/136 (69.85%), Query Frame = 0
Query:    1 MKLKGDHGFLLALAISPTSRLVFAQRAGGGLPSAAHHGLKRFAEEDIADAGVGDVYPIDGDDQQGGQDLVDVLEADDQTTVVGDIELGELLCDSLNDAPGASLLRFTISSDTTVIAECTSYSSIDGSVLPDGNTAR 136
            M+L G  G L A+ ++P  +L  AQ   GG+PSA      RFAEED++D GVG+V+PI  D+++  Q+LV  LE+D Q TVV  I LGELLCDSL DA  ++LLRF ISS  TVIAE TSYSSIDG++ PDG T +
Sbjct:    1 MRLLG--GLLFAVGVAPLLQLTRAQAPDGGIPSATRSVWTRFAEEDVSDVGVGEVHPIASDEEEIEQELVAALESDPQATVVVHIGLGELLCDSLEDASDSTLLRFNISSTETVIAERTSYSSIDGNIFPDGETRK 134          
BLAST of mRNA_Ecto-sp13_S_contig584.16315.1 vs. uniprot
Match: D7FTV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV1_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 3.500e-15
Identity = 52/81 (64.20%), Postives = 55/81 (67.90%), Query Frame = 0
Query:   82 VGDIELGELLCDSLNDAPGASLLRFTISSDTTVIAECTSYSSIDGSVLPDGNT---------ARWADAFD--LFSVPMSRG 151
            VGDIELGELLCDSL DA  +SLLRFTISS  TVIAE TSYSSIDGSVL DG T         +R AD     + SVP S G
Sbjct:   10 VGDIELGELLCDSLEDAADSSLLRFTISSTETVIAERTSYSSIDGSVLSDGITRMSFLLKLVSRNADGSTSIVTSVPCSAG 90          
BLAST of mRNA_Ecto-sp13_S_contig584.16315.1 vs. uniprot
Match: D8LCP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP8_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 4.100e-9
Identity = 31/66 (46.97%), Postives = 46/66 (69.70%), Query Frame = 0
Query:   67 QDLVDVLEADDQTTVVGDIELGELLCDSLNDAPGASLLRFTISSDTTVIAECTSYSSIDGSVLPDG 132
            ++L + LE D+Q TV+G+++LGELLCDSL  A  A LL+F +S++ T+IA  TSY+ + G     G
Sbjct:  148 KELAETLEVDEQVTVLGEVQLGELLCDSLVQAEDAPLLQFALSANETIIANRTSYTVVSGETFTGG 213          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig584.16315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LMP1_ECTSI5.150e-4763.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF50_9PHAE8.000e-4061.03LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
D8LLU0_ECTSI1.340e-3455.15PKD domain protein n=1 Tax=Ectocarpus siliculosus ... [more]
D7FTV1_ECTSI3.500e-1564.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCP8_ECTSI4.100e-946.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..155
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig584contigEcto-sp13_S_contig584:1806..2918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig584.16315.1mRNA_Ecto-sp13_S_contig584.16315.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig584 1757..2918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig584.16315.1 ID=prot_Ecto-sp13_S_contig584.16315.1|Name=mRNA_Ecto-sp13_S_contig584.16315.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=156bp
MKLKGDHGFLLALAISPTSRLVFAQRAGGGLPSAAHHGLKRFAEEDIADA
GVGDVYPIDGDDQQGGQDLVDVLEADDQTTVVGDIELGELLCDSLNDAPG
ASLLRFTISSDTTVIAECTSYSSIDGSVLPDGNTARWADAFDLFSVPMSR
GRGYR*
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