prot_Ecto-sp13_S_contig58386.16314.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig58386.16314.1 vs. uniprot
Match: A0A835ZK06_9STRA (Ribosomal protein S11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK06_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 5.670e-10 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 1 MRATGGNKTKTPGPGAQSALRALARAGMKV 30
MRATGGNKTKTPGPGAQSALRALARAGMK+
Sbjct: 94 MRATGGNKTKTPGPGAQSALRALARAGMKI 123
BLAST of mRNA_Ecto-sp13_S_contig58386.16314.1 vs. uniprot
Match: D7FYS4_ECTSI (40S ribosomal protein S14 n=3 Tax=Sar TaxID=2698737 RepID=D7FYS4_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 5.990e-10 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 1 MRATGGNKTKTPGPGAQSALRALARAGMKV 30
MRATGGNKTKTPGPGAQSALRALARAGMK+
Sbjct: 97 MRATGGNKTKTPGPGAQSALRALARAGMKI 126
BLAST of mRNA_Ecto-sp13_S_contig58386.16314.1 vs. uniprot
Match: A0A6A2X9C2_HIBSY (40S ribosomal protein S14 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2X9C2_HIBSY) HSP 1 Score: 57.0 bits (136), Expect = 6.400e-10 Identity = 27/30 (90.00%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 1 MRATGGNKTKTPGPGAQSALRALARAGMKV 30
+RATGGNKTKTPGPGAQSALRALAR+GMK+
Sbjct: 6 LRATGGNKTKTPGPGAQSALRALARSGMKI 35
BLAST of mRNA_Ecto-sp13_S_contig58386.16314.1 vs. uniprot
Match: RS14_TOBAC (40S ribosomal protein S14 (Fragment) n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=RS14_TOBAC) HSP 1 Score: 57.0 bits (136), Expect = 7.370e-10 Identity = 27/30 (90.00%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 1 MRATGGNKTKTPGPGAQSALRALARAGMKV 30
+RATGGNKTKTPGPGAQSALRALAR+GMK+
Sbjct: 12 LRATGGNKTKTPGPGAQSALRALARSGMKI 41
BLAST of mRNA_Ecto-sp13_S_contig58386.16314.1 vs. uniprot
Match: A0A2U1MX59_ARTAN (Uncharacterized protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MX59_ARTAN) HSP 1 Score: 57.0 bits (136), Expect = 8.310e-10 Identity = 27/30 (90.00%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 1 MRATGGNKTKTPGPGAQSALRALARAGMKV 30
+RATGGNKTKTPGPGAQSALRALAR+GMK+
Sbjct: 17 LRATGGNKTKTPGPGAQSALRALARSGMKI 46
BLAST of mRNA_Ecto-sp13_S_contig58386.16314.1 vs. uniprot
Match: A0A2U1PPJ3_ARTAN (Ribosomal protein S11 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PPJ3_ARTAN) HSP 1 Score: 57.0 bits (136), Expect = 1.010e-9 Identity = 27/30 (90.00%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 1 MRATGGNKTKTPGPGAQSALRALARAGMKV 30
+RATGGNKTKTPGPGAQSALRALAR+GMK+
Sbjct: 43 LRATGGNKTKTPGPGAQSALRALARSGMKI 72
BLAST of mRNA_Ecto-sp13_S_contig58386.16314.1 vs. uniprot
Match: A0A7J8PGG2_GOSRA (Uncharacterized protein n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A7J8PGG2_GOSRA) HSP 1 Score: 57.0 bits (136), Expect = 1.160e-9 Identity = 27/30 (90.00%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 1 MRATGGNKTKTPGPGAQSALRALARAGMKV 30
+RATGGNKTKTPGPGAQSALRALAR+GMK+
Sbjct: 31 LRATGGNKTKTPGPGAQSALRALARSGMKI 60
BLAST of mRNA_Ecto-sp13_S_contig58386.16314.1 vs. uniprot
Match: UPI001C4B88AD (40S ribosomal protein S14-like n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4B88AD) HSP 1 Score: 58.2 bits (139), Expect = 1.190e-9 Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 1 MRATGGNKTKTPGPGAQSALRALARAGMKV 30
+RATGGNKTKTPGPGAQSALRALARAGMK+
Sbjct: 38 LRATGGNKTKTPGPGAQSALRALARAGMKI 67
BLAST of mRNA_Ecto-sp13_S_contig58386.16314.1 vs. uniprot
Match: A0A8J5F7Y5_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F7Y5_ZINOF) HSP 1 Score: 58.2 bits (139), Expect = 1.290e-9 Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 1 MRATGGNKTKTPGPGAQSALRALARAGMKV 30
+RATGGNKTKTPGPGAQSALRALARAGMK+
Sbjct: 97 LRATGGNKTKTPGPGAQSALRALARAGMKI 126
BLAST of mRNA_Ecto-sp13_S_contig58386.16314.1 vs. uniprot
Match: A0A0E0NFZ0_ORYRU (Uncharacterized protein n=6 Tax=Poaceae TaxID=4479 RepID=A0A0E0NFZ0_ORYRU) HSP 1 Score: 57.0 bits (136), Expect = 1.370e-9 Identity = 27/30 (90.00%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 1 MRATGGNKTKTPGPGAQSALRALARAGMKV 30
+RATGGNKTKTPGPGAQSALRALAR+GMK+
Sbjct: 38 LRATGGNKTKTPGPGAQSALRALARSGMKI 67 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig58386.16314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig58386.16314.1 ID=prot_Ecto-sp13_S_contig58386.16314.1|Name=mRNA_Ecto-sp13_S_contig58386.16314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=38bpback to top |