prot_Ecto-sp13_S_contig5838.16313.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5838.16313.1
Unique Nameprot_Ecto-sp13_S_contig5838.16313.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length338
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5838.16313.1 vs. uniprot
Match: A0A6H5L066_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L066_9PHAE)

HSP 1 Score: 293 bits (751), Expect = 3.080e-91
Identity = 154/171 (90.06%), Postives = 159/171 (92.98%), Query Frame = 0 
Query:    1 MDNAVDREVLAEATVVSLSHLRSPLERIMSAFFVGGKPHSPPCARRSGQTRREVQECFAGMVDSQGCRNIAGRTYTGHDAYDAGVSVCYSPRNSSSGGDVDGKHRGLEGDRGGAEGCGGGGAEPKGLVDGSGSEDDEDGGDAAGGDVGSDCQETLGAALAGLCLFNHITLA 171
            MDNAVDREVLA+ATVVSLS LRSPLERIMSA+FVGGKPHSPPCARRSGQTRREVQECFAGMVDSQG RN+AGRTYTGHDAYD+GVSVCYSPRNSSS  D DGKH GLEG RGGAE    GGAEP GLVDGSGSEDDEDGGDAAGGDVG+DCQETLGAALAGLCLFNHITLA
Sbjct:  320 MDNAVDREVLADATVVSLSQLRSPLERIMSAYFVGGKPHSPPCARRSGQTRREVQECFAGMVDSQGFRNVAGRTYTGHDAYDSGVSVCYSPRNSSSSRDGDGKHHGLEGYRGGAE---SGGAEPNGLVDGSGSEDDEDGGDAAGGDVGNDCQETLGAALAGLCLFNHITLA 487
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BLAST of mRNA_Ecto-sp13_S_contig5838.16313.1 vs. uniprot
Match: D7FRW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW7_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 8.540e-52
Identity = 99/110 (90.00%), Postives = 101/110 (91.82%), Query Frame = 0 
Query:   61 MVDSQGCRNIAGRTYTGHDAYDAGVSVCYSPRNSSSGGDVDGKHRGLEGDRGGAEGCGGGGAEPKGLVDGSGSEDDEDGGDAAGGDVGSDCQETLGAALAGLCLFNHITL 170
            MVDSQG RN+AGRTYTGHDAYDAGVSVCYSPRNSSSG D DGKHR LE DRGGAE   GGGA+PKGLVDGSGSEDDEDGGDA GGDVGSDCQETLGAALAGLCLFNHITL
Sbjct:    1 MVDSQGFRNVAGRTYTGHDAYDAGVSVCYSPRNSSSG-DGDGKHRALEADRGGAE---GGGAKPKGLVDGSGSEDDEDGGDAVGGDVGSDCQETLGAALAGLCLFNHITL 106
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5838.16313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L066_9PHAE3.080e-9190.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRW7_ECTSI8.540e-5290.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5838contigEcto-sp13_S_contig5838:4187..7613 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5838.16313.1mRNA_Ecto-sp13_S_contig5838.16313.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5838 3119..8782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5838.16313.1 ID=prot_Ecto-sp13_S_contig5838.16313.1|Name=mRNA_Ecto-sp13_S_contig5838.16313.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=338bp
MDNAVDREVLAEATVVSLSHLRSPLERIMSAFFVGGKPHSPPCARRSGQT
RREVQECFAGMVDSQGCRNIAGRTYTGHDAYDAGVSVCYSPRNSSSGGDV
DGKHRGLEGDRGGAEGCGGGGAEPKGLVDGSGSEDDEDGGDAAGGDVGSD
CQETLGAALAGLCLFNHITLAEAPATSALLLLETLPWIRPDQRFFEGLPP
PAGRFEGGTYSRDRDAGTEHLQEARLDLLRHDDDGPGRVQFITQDLRETA
SAANQVDQKLYDVVSAKMCLRLGELDLLEHPAVHAELGTSLLGERCASRE
WYEGVIDSIDGTIRTHSQGSRERCRLFQPLPQPPSPL*
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