prot_Ecto-sp13_S_contig58375.16312.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig58375.16312.1
Unique Nameprot_Ecto-sp13_S_contig58375.16312.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length136
Homology
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BLAST of mRNA_Ecto-sp13_S_contig58375.16312.1 vs. uniprot
Match: A0A6H5KFF6_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFF6_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 1.710e-39
Identity = 85/99 (85.86%), Postives = 88/99 (88.89%), Query Frame = 0 
Query:    1 MVTLLHVTAIATALAVVVNAARPSALSVQLTNNKNHAGGGRGNKLGAAAGRRLSEGGGVGMVDVNDCENMEYTGVISLGTPPQEFRVIFSIAASYLWVS 99
            MV LL VTA+A ALAVVVNAA PSALSVQLT+NKNHAG GR N L AAAGRRL EGGGVG VDVNDCENMEYTGVISLGTPPQEFRVIFSIA SYLWV+
Sbjct:    1 MVALLRVTAVAAALAVVVNAAHPSALSVQLTSNKNHAGRGR-NMLSAAAGRRLGEGGGVGTVDVNDCENMEYTGVISLGTPPQEFRVIFSIATSYLWVA 98
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BLAST of mRNA_Ecto-sp13_S_contig58375.16312.1 vs. uniprot
Match: A0A6H5KFQ5_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFQ5_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 7.630e-6
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 0 
Query:   59 VGMVDVNDCENMEYTGVISLGTPPQEFRVIFSIAASYLWVS 99
             G+V+V DCEN EY+GV+ +GTPPQEF V+    +  LWV+
Sbjct:   80 AGVVEVMDCENTEYSGVVGIGTPPQEFEVVLDTGSYNLWVT 120
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig58375.16312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KFF6_9PHAE1.710e-3985.86Peptidase A1 domain-containing protein n=1 Tax=Ect... [more]
A0A6H5KFQ5_9PHAE7.630e-653.66Peptidase A1 domain-containing protein n=2 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033121Peptidase family A1 domainPFAMPF00026Aspcoord: 71..99
e-value: 8.5E-5
score: 22.1
IPR033121Peptidase family A1 domainPROSITEPS51767PEPTIDASE_A1coord: 72..135
score: 11.092
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10coord: 24..133
e-value: 3.1E-8
score: 35.6
IPR021109Aspartic peptidase domain superfamilySUPERFAMILY50630Acid proteasescoord: 10..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..86
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..135
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..109
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.798
NoneNo IPR availableTMHMMTMhelixcoord: 2..21
NoneNo IPR availableTMHMMTMhelixcoord: 87..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig58375contigEcto-sp13_S_contig58375:98..505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig58375.16312.1mRNA_Ecto-sp13_S_contig58375.16312.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig58375 2..661 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig58375.16312.1 ID=prot_Ecto-sp13_S_contig58375.16312.1|Name=mRNA_Ecto-sp13_S_contig58375.16312.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=136bp
MVTLLHVTAIATALAVVVNAARPSALSVQLTNNKNHAGGGRGNKLGAAAG
RRLSEGGGVGMVDVNDCENMEYTGVISLGTPPQEFRVIFSIAASYLWVSL
FLSVALALCSLRPSLLSKKSPKKLPTPARESSSNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033121PEPTIDASE_A1
IPR021109Peptidase_aspartic_dom_sf