prot_Ecto-sp13_S_contig58260.16298.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig58260.16298.1
Unique Nameprot_Ecto-sp13_S_contig58260.16298.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length93
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig58260.16298.1 vs. uniprot
Match: D7FKY3_ECTSI (Outer dynein arm docking complex protein oda-dc n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKY3_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 7.110e-44
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0 
Query:    1 EDKRKTAGPDNAQTVKGGVSTTEREIQRVENRLQQTLMKASMLDAANARRKECVNSLRREKMAEAKAQKRLVAELERARAICASTTRATQQVL 93
            EDKRKTAGPDNAQTVKGGVSTTEREIQRVENRLQQTLMKASMLDAANARRKECVNSLRREKMAE KAQKRLVAELERARAICASTTRATQQ++
Sbjct:  125 EDKRKTAGPDNAQTVKGGVSTTEREIQRVENRLQQTLMKASMLDAANARRKECVNSLRREKMAEVKAQKRLVAELERARAICASTTRATQQMV 217
[Close]
BLAST of mRNA_Ecto-sp13_S_contig58260.16298.1 vs. uniprot
Match: A0A835Z6M1_9STRA (Plastocyanin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M1_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 5.930e-5
Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 0 
Query:   19 VSTTEREIQRVENRLQQTLMKASMLDAANARRKECVNSLRREKMAEAKAQKRLVAELERARAICASTTRATQ 90
            V  TER +Q++ENRLQQ L++AS L+  N   K  V+ +RR+K++E   ++R+ A+L   RA CA   R TQ
Sbjct:  121 VGQTERHVQKLENRLQQALIRASRLENENETLKVEVDRVRRQKLSEVGGRRRVEAQLAALRAQCAELVRRTQ 192
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig58260.16298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKY3_ECTSI7.110e-4496.77Outer dynein arm docking complex protein oda-dc n=... [more]
A0A835Z6M1_9STRA5.930e-544.44Plastocyanin-like domain-containing protein n=1 Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availableCOILSCoilCoilcoord: 19..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig58260contigEcto-sp13_S_contig58260:154..634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig58260.16298.1mRNA_Ecto-sp13_S_contig58260.16298.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig58260 154..634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig58260.16298.1 ID=prot_Ecto-sp13_S_contig58260.16298.1|Name=mRNA_Ecto-sp13_S_contig58260.16298.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
EDKRKTAGPDNAQTVKGGVSTTEREIQRVENRLQQTLMKASMLDAANARR
KECVNSLRREKMAEAKAQKRLVAELERARAICASTTRATQQVL
back to top