mRNA_Ecto-sp13_S_contig5821.16286.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5821.16286.1
Unique NamemRNA_Ecto-sp13_S_contig5821.16286.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5821.16286.1 vs. uniprot
Match: A0A6H5L3B6_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B6_9PHAE)

HSP 1 Score: 584 bits (1506), Expect = 1.980e-200
Identity = 556/627 (88.68%), Postives = 562/627 (89.63%), Query Frame = 1 
Query:    1 MAPAAPTRCFFDVAIGGEAAGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGRNSNGSQFFITTHPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGELLASRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGVGSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDH-------HRAVGNGVSAASKENGSRSSKPANGSSSRHAAPEGRRAVSPSPPKREAATGRHGRSRSRGRGSKSPAARQDKSASNAQDAPDDGRTRYKGRGGRVYRTPSPVRGGRADRDRDDRYNNRPRDGGGXXXXXXYGDRSGA-----------------------------APQQQXXXXXXX----EGRRGWGRQARRARLPLAASSEEVTRSPWRRLAGLSEPGPPRPEVSLPVILAQQEQAL 1761
            MAPAAPTRCFFD++IGGE AGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAG+NSNGSQFFITTHPASHLDGLHVVFGELESGADTL KMSEVETDKKDAPISLQRVIIEDCGELL SRS XXXXXXXXXXXXXXXXXXXXXXXXXXXXANGVGS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         HRAVGNGVSAASKENGSRSSKPANGSSSRH APEGRRA SPSPPKR AATGRHGRSRSR RGSKSPAARQDKS SNAQDAPDDGRTRYKGRGGRVYRTPSPVRGG+ADRDRDD YNNRPRDGGG XXXXXYGDRSGA                             APQQ XXXXXXX    EG RG  RQARRARLPLAA SEEV R PWRR AGL EPGP RPEVSLPV+LAQQE+AL
Sbjct:   25 MAPAAPTRCFFDISIGGEPAGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFITTHPASHLDGLHVVFGELESGADTLVKMSEVETDKKDAPISLQRVIIEDCGELLPSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRAVGNGVSAASKENGSRSSKPANGSSSRHTAPEGRRAASPSPPKRAAATGRHGRSRSRSRGSKSPAARQDKSTSNAQDAPDDGRTRYKGRGGRVYRTPSPVRGGKADRDRDDGYNNRPRDGGGRXXXXXYGDRSGAWDRDRRDRDLDNRGGGARGRAELRRPGGAAPQQXXXXXXXXXXXXEGWRGQRRQARRARLPLAACSEEVARPPWRRPAGLPEPGPSRPEVSLPVVLAQQEEAL 651
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5821.16286.1 vs. uniprot
Match: D7FWA1_ECTSI (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWA1_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 1.820e-126
Identity = 383/436 (87.84%), Postives = 387/436 (88.76%), Query Frame = 1 
Query:    1 MAPAAPTRCFFDVAIGGEAAGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGRNSNGSQFFITTHPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGELLASRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGVGSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHHRAVGNGVSAASKENGSRSSKPANGSSSRHAAPEGRRAVSPSPPKREAATGRHGRS 1308
            MAPAAPTRCFFD+AIGGE AGRMVF+LYTE VPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAG+NSNGSQFFITT PASHLDGLHVVFGELESGADTL KMSEVETDKKDAPISLQRV+IEDCGELL SR      XXXXXXXXXXXXXXXXXX      ANGVGSGM                  XXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     RAVGNGVSAASKENGSRSSKPANGSSSRHAAPEGRRAVSPSPPKR AATGRHGRS
Sbjct:    1 MAPAAPTRCFFDMAIGGEPAGRMVFELYTEKVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFITTDPASHLDGLHVVFGELESGADTLTKMSEVETDKKDAPISLQRVVIEDCGELLPSRGSSSKHXXXXXXXXXXXXXXXXXXDSDDGRANGVGSGMKKMQSRGAARDTPDKKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEEGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----RAVGNGVSAASKENGSRSSKPANGSSSRHAAPEGRRAVSPSPPKRAAATGRHGRS 431
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5821.16286.1 vs. uniprot
Match: A0A6V1RCR2_HETAK (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RCR2_HETAK)

HSP 1 Score: 234 bits (597), Expect = 1.670e-69
Identity = 112/173 (64.74%), Postives = 134/173 (77.46%), Query Frame = 1 
Query:   22 RCFFDVAIGGEAAGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGRNSNGSQFFITTHPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGEL 540
            + FFD+ IGG  AGR+VF+LY + VP TAENFR LCTGEKG G TT + LHYKGVPFHR+I GFM QGGDF   NGTGGESIYGGKFKDE     +KH +  LLSMANAG++SNG+QFF+T  P  HLDG HVVFGE+ +G D + +M EVE D+K+ P++ QRV+I DCGEL
Sbjct:   15 KTFFDITIGGVKAGRIVFELYNDLVPKTAENFRALCTGEKGIGPTTRKPLHYKGVPFHRIIGGFMAQGGDFSNNNGTGGESIYGGKFKDEA--FTVKHGRPGLLSMANAGKDSNGAQFFVTFVPTPHLDGKHVVFGEVVAGMDIVRRMEEVECDRKNCPVAAQRVLIADCGEL 185
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5821.16286.1 vs. uniprot
Match: A0A8K1CG83_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG83_PYTOL)

HSP 1 Score: 236 bits (601), Expect = 2.050e-69
Identity = 115/177 (64.97%), Postives = 137/177 (77.40%), Query Frame = 1 
Query:   22 RCFFDVAIGGEAAGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGRNSNGSQFFITTHPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGELLASR 552
            R FFD++IGG +AGR+VF+LY + VPLT +NFR LCTGE G G+TTG+ LHYKGVPFHR+I GFM QGGDF  R+GTGGESIYG +FKDE    + +H K  LLSMANAG N+NGSQFFITT P  HLDG HVVFGE+E G D + KM  VET  KD P+++Q V IEDCGE+  S+
Sbjct:    6 RVFFDISIGGASAGRIVFRLY-DGVPLTTDNFRALCTGEAGVGKTTGKPLHYKGVPFHRIIKGFMLQGGDFSNRDGTGGESIYGSRFKDES--FRYRHTKPGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVEKGMDVVRKMESVETGVKDRPVAMQTVRIEDCGEVKKSK 179
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5821.16286.1 vs. uniprot
Match: G4ZG38_PHYSP (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZG38_PHYSP)

HSP 1 Score: 229 bits (585), Expect = 5.950e-69
Identity = 114/173 (65.90%), Postives = 133/173 (76.88%), Query Frame = 1 
Query:   22 RCFFDVAIGGEAAGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGRNSNGSQFFITTHPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGEL 540
            R +FDV+IGG  AGR+VF+LY   +P T ENFR LCTGE+G GR+TG+ LHYK VPFHRVI GFM QGGDF RRNGTGGESIYG KF DE    + +H+K  LLSMANAGRN+NGSQFFITT P  HLDG HVVFGE+ESG D + ++  VET   D P  +Q V+IEDCGE+
Sbjct:    3 RVYFDVSIGGSRAGRIVFRLYPG-LPKTTENFRSLCTGERGLGRSTGKPLHYKKVPFHRVIKGFMLQGGDFSRRNGTGGESIYGDKFADES--FRYRHSKAGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGEVESGMDVVRRVENVETVANDKPAPMQAVVIEDCGEI 172
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5821.16286.1 vs. uniprot
Match: A0A2D4BWY8_PYTIN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWY8_PYTIN)

HSP 1 Score: 228 bits (580), Expect = 8.520e-68
Identity = 113/177 (63.84%), Postives = 136/177 (76.84%), Query Frame = 1 
Query:   22 RCFFDVAIGGEAAGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGRNSNGSQFFITTHPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGELLASR 552
            R FFD++IGGE+AGR+VFKLY + VP T+ENFR LCTGE G G+TTG+ LH+KG  FHRVI GFM QGGDF  R+GTGGESIYG +F DE    + +H +  LLSMANAGRN+NGSQFFITT P  HLDG HVVFGE+ESG D + K+  VET  +D P+++Q V IEDCGE  A +
Sbjct:    2 RVFFDISIGGESAGRIVFKLYDD-VPKTSENFRGLCTGEYGIGKTTGKPLHFKGSVFHRVIKGFMLQGGDFSNRDGTGGESIYGSRFADES--FRHRHTRAGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGEVESGMDVVRKIENVETGPRDRPVAMQTVSIEDCGEARAKK 175
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5821.16286.1 vs. uniprot
Match: A0A3R7HCE3_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HCE3_9STRA)

HSP 1 Score: 226 bits (577), Expect = 7.380e-67
Identity = 114/173 (65.90%), Postives = 130/173 (75.14%), Query Frame = 1 
Query:   22 RCFFDVAIGGEAAGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGRNSNGSQFFITTHPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGEL 540
            R +FDV+IGG  AGR+VF+LY   +P T ENFR LCTGE+G GR+TG+ LHYK VPFHR I GFM QGGDF R NGTGGESIYG KF DE    K +HNK  LLSMANAG+N+NGSQFFITT P  HLDG HVVFGE+ SG D + KM  VET   D P  +Q V+IEDCGE+
Sbjct:    6 RVYFDVSIGGSRAGRIVFRLYPG-LPKTTENFRSLCTGERGLGRSTGKPLHYKKVPFHRTIKGFMLQGGDFSRYNGTGGESIYGEKFADES--FKYRHNKAGLLSMANAGKNTNGSQFFITTVPTPHLDGKHVVFGEVVSGMDVVRKMENVETVANDKPAPMQAVVIEDCGEV 175
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5821.16286.1 vs. uniprot
Match: A0A3F2RQ90_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQ90_9STRA)

HSP 1 Score: 226 bits (577), Expect = 2.100e-66
Identity = 114/173 (65.90%), Postives = 130/173 (75.14%), Query Frame = 1 
Query:   22 RCFFDVAIGGEAAGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGRNSNGSQFFITTHPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGEL 540
            R +FDV+IGG  AGR+VF+LY   +P T ENFR LCTGE+G GR+TG+ LHYK VPFHR I GFM QGGDF R NGTGGESIYG KF DE    K +HNK  LLSMANAG+N+NGSQFFITT P  HLDG HVVFGE+ SG D + KM  VET   D P  +Q V+IEDCGE+
Sbjct:    6 RVYFDVSIGGSRAGRIVFRLYPG-LPKTTENFRSLCTGERGLGRSTGKPLHYKKVPFHRTIKGFMLQGGDFSRYNGTGGESIYGEKFADES--FKYRHNKAGLLSMANAGKNTNGSQFFITTVPTPHLDGKHVVFGEVVSGMDVVRKMENVETVANDKPAPMQAVVIEDCGEV 175
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5821.16286.1 vs. uniprot
Match: H3G611_PHYRM (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G611_PHYRM)

HSP 1 Score: 222 bits (566), Expect = 3.580e-66
Identity = 111/173 (64.16%), Postives = 130/173 (75.14%), Query Frame = 1 
Query:   22 RCFFDVAIGGEAAGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGRNSNGSQFFITTHPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGEL 540
            R +FDV+IGG  AGR+ F+L+   +P T ENFR LCTGE+G GRTTG+ LHYK VPFHRVI GFM QGGD    +GTGGESIYGGKF+DE    + +H K  LLSMANAG+N+NGSQFFITT P  HLDG HVVFGE+  G D + KM  VET  KD P ++Q V+IEDCGEL
Sbjct:    1 RVYFDVSIGGSRAGRVEFQLFPG-LPKTTENFRSLCTGERGLGRTTGKALHYKTVPFHRVIKGFMLQGGDLSNHDGTGGESIYGGKFEDES--FRYRHAKAGLLSMANAGKNTNGSQFFITTVPTPHLDGKHVVFGEVVRGIDVMKKMESVETVAKDKPAAMQSVVIEDCGEL 170
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5821.16286.1 vs. uniprot
Match: K3WMT2_GLOUD (PPIase cyclophilin-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMT2_GLOUD)

HSP 1 Score: 226 bits (577), Expect = 4.400e-65
Identity = 111/180 (61.67%), Postives = 136/180 (75.56%), Query Frame = 1 
Query:    1 MAPAAPTRCFFDVAIGGEAAGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGRNSNGSQFFITTHPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGEL 540
            MAP+   R FFD++IGG  AGR+VF+L+ + VP T +NFR LCTG+KG G+TTG+ LHYKG+ FHR+I GFM QGGDF ++NGTGGESIYG +F+DE    + +H K  LLSMANAG N+NGSQFFITT P  HLDG HVVFGE+ SG D + KM  VET   + P  +Q V+IEDCGEL
Sbjct:    1 MAPSDAKRVFFDISIGGSRAGRIVFRLF-DGVPKTTDNFRALCTGDKGIGKTTGKPLHYKGIVFHRIIKGFMLQGGDFSKQNGTGGESIYGDRFRDES--FRYRHTKPGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVVSGMDIVQKMENVETVANNRPAPMQSVVIEDCGEL 177
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5821.16286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3B6_9PHAE1.980e-20088.68PPIase cyclophilin-type domain-containing protein ... [more]
D7FWA1_ECTSI1.820e-12687.84PPIase cyclophilin-type domain-containing protein ... [more]
A0A6V1RCR2_HETAK1.670e-6964.74Peptidyl-prolyl cis-trans isomerase n=2 Tax=Hetero... [more]
A0A8K1CG83_PYTOL2.050e-6964.97Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
G4ZG38_PHYSP5.950e-6965.90Peptidyl-prolyl cis-trans isomerase (Fragment) n=1... [more]
A0A2D4BWY8_PYTIN8.520e-6863.84Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pythiu... [more]
A0A3R7HCE3_9STRA7.380e-6765.90Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phytop... [more]
A0A3F2RQ90_9STRA2.100e-6665.90Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytop... [more]
H3G611_PHYRM3.580e-6664.16Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytop... [more]
K3WMT2_GLOUD4.400e-6561.67PPIase cyclophilin-type domain-containing protein ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5821contigEcto-sp13_S_contig5821:171..4619 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score394.0
Seed ortholog evalue1.2e-106
Seed eggNOG ortholog2880.D7FWA1
Preferred namePPIG
Model size1764
KEGG koko:K01802,ko:K05864,ko:K09566,ko:K12740
KEGG Pathwayko04217,ko04218,map04217,map04218
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006139,GO:0006396,GO:0006397,GO:0006457,GO:0006464,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016018,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016363,GO:0016604,GO:0016607,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030198,GO:0031974,GO:0031981,GO:0033218,GO:0034399,GO:0034641,GO:0036211,GO:0042277,GO:0043062,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140096,GO:1901360,GO:1901564
Exons6
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0546@2759
Ec32 ortholog descriptionCyclophilin-like domain
Ec32 orthologEc-01_003910.1
EC5.2.1.8
Cds size1764
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03041,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5821.16286.1prot_Ecto-sp13_S_contig5821.16286.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5821 171..4619 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463808.8441124-CDS-Ecto-sp13_S_contig5821:170..2281681463808.8441124-CDS-Ecto-sp13_S_contig5821:170..228Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5821 171..228 +
1681463808.8579679-CDS-Ecto-sp13_S_contig5821:676..7991681463808.8579679-CDS-Ecto-sp13_S_contig5821:676..799Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5821 677..799 +
1681463808.8687284-CDS-Ecto-sp13_S_contig5821:1513..15401681463808.8687284-CDS-Ecto-sp13_S_contig5821:1513..1540Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5821 1514..1540 +
1681463808.8795393-CDS-Ecto-sp13_S_contig5821:2260..24241681463808.8795393-CDS-Ecto-sp13_S_contig5821:2260..2424Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5821 2261..2424 +
1681463808.8910751-CDS-Ecto-sp13_S_contig5821:3081..42521681463808.8910751-CDS-Ecto-sp13_S_contig5821:3081..4252Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5821 3082..4252 +
1681463808.8994117-CDS-Ecto-sp13_S_contig5821:4398..46191681463808.8994117-CDS-Ecto-sp13_S_contig5821:4398..4619Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5821 4399..4619 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5821.16286.1

>prot_Ecto-sp13_S_contig5821.16286.1 ID=prot_Ecto-sp13_S_contig5821.16286.1|Name=mRNA_Ecto-sp13_S_contig5821.16286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=588bp
MAPAAPTRCFFDVAIGGEAAGRMVFKLYTETVPLTAENFRCLCTGEKGEG
RTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAG
LKLKHNKKHLLSMANAGRNSNGSQFFITTHPASHLDGLHVVFGELESGAD
TLAKMSEVETDKKDAPISLQRVIIEDCGELLASRSSSSKHHRRHSSRDVG
REEEAGGGDSDDGRANGVGSGMKKRQSGGAARDAPDKKKEKRDRKALKKE
RKKEKKAEKKRLKKSKRKGEEGEGKKKQKKHRRHHRRHDDSDGGSSSSDD
SSGEDSDASGGGADRKRRKRESKKAKHAAKKSSSKDAKKKEKRAVQSSGS
SSSSSGSSSDEGDNAPRGGGGGGHGKGGDHHRAVGNGVSAASKENGSRSS
KPANGSSSRHAAPEGRRAVSPSPPKREAATGRHGRSRSRGRGSKSPAARQ
DKSASNAQDAPDDGRTRYKGRGGRVYRTPSPVRGGRADRDRDDRYNNRPR
DGGGRDGGGRYGDRSGAAPQQQEQEQEQEEGRRGWGRQARRARLPLAASS
EEVTRSPWRRLAGLSEPGPPRPEVSLPVILAQQEQAL*
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mRNA from alignment at Ecto-sp13_S_contig5821:171..4619+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5821.16286.1 ID=mRNA_Ecto-sp13_S_contig5821.16286.1|Name=mRNA_Ecto-sp13_S_contig5821.16286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4449bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5821:171..4619+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTCCCGCGGCGCCGACACGATGCTTCTTCGACGTAGCAATCGGTGG
CGAAGCAGGTGGGTTGCGAAGCTCGGTCTGGTAGGAAGTATCCACCTGAA
CCTCGCGGATTGCGGCCTCAGCTCGACTGCCAACATAGCTGGAAGTTCCA
CCCACCATGCAAACATGCAAGCTGGCGTGTGTTGGATAGTGAGAAGGCCT
GGTGCACGTGCTGCCCATGCGGATCTTGCTTTAGATGGATTGCTGCGCAC
TTGCGTCCCTCTGGCATTGCCATGCGTGATCGCGTGCGCCCCCATATGGT
CGGCCGAACTGCTGCAGGCAGGCAAGCACCTTGGCTACCAGCCATGCGTA
GTATGTACAATTTCTTCTCGGGCTGTCTGACATGGCTGGCCTACAGGCAT
TCTCTTGTACTCTCGCCCCATCGTCGACGTTGGCCTTACAATCCCTGTTT
TGGTCAACGTTGTTGCGATGCCGCTGCTGGTGTTCCTGCTCACGTTCGAA
ATCCAGCTGGGAGGATGGTGTTCAAGCTCTACACCGAGACGGTGCCCTTG
ACCGCGGAGAACTTCCGGTGCCTGTGCACCGGCGAGAAGGGAGAGGGCAG
AACCACGGGTAGGATGCTGCACTACAAAGGTGCGTATCGGTGGTGAGGCG
GCGGGAAAATCGAGGAGGCGGCAAGCGTGTGTCCCGTGGGAGGGAAGTGA
CCTTTTTTTTGCTTTTTTGTTGGTTAAGACTCACGTCCTGTTTTACTATG
TGTGTCCTACAGCGGTAGCCTGTATAGAATACAAGGTCCGCCATTCTTGT
GCTCTGGTTCCCGCACCTACGGCATGTCTTTGGAGATCCCCCGGCGTGTG
TTGCGCTGTGGCGTTCAAGTTTTCAGACAAACACGCAGCGCCTTGTTGTT
TGTTCCATCAGATCCCACTCGGTCTTCACCACGTGGGAAACTACTCTTCT
TTCTTGGAAAGATGTCTTCGCCGACAAGGCATCTGTCTCAGTTTCGATTA
CACCGCAAGGCAGGCGCGCCGTGTGAGACTTTTCAGTACCGCAGTTGGCG
CCTTGGCCGCTCACCACAGCACGCACGACTGCTGCTTTGTATTGTACGCT
TTCTATCCAGCGGTTTGGACACTCTCTACCGCGGCGGGCATTATCCTCTC
GGTCACCATCATGCACGCATACCCGTTTGCCTCCATGCTGTGTTTCACAT
CTCCTATTTGTTCTGTCTGTCTCTTCCTGGTGCCGTGTTTCCCATGCTCG
CCTTCTCTTGTTTACGTCCACCTCCGCTGTGTCTGCTTTATCCTGTTTTG
GTCCATTCCTCCGCCGGGTACCATGTGGTTTATCGTTCGACAGGTGTCCC
CTTCCACCGCGTGATTCCAGGTGAGTTTCGGAGTCTCTACACCTGGTTGA
TGCTATGGCATACCGCTGTTTTTTTTGGCGAGCACGTGTTGGTTCGTGTT
TCGCGAAAGGATGTGTGTAGGCAGGATTGAGGCATGAGTCAATCTTAGAA
CGGAAGTATATGATATTCAATACCCTGGTCCAGAAAACCTCACGGGCGAT
GATACTTTCAAATACTCGAATGTTATCACCGTGGTGTGGCCAAAACAACA
CAGATGGCACCGCCGTGGGAGCGTGCAGACATACGGTCTTGGTACGGCCT
TTCCCTTCGTATTCCACCTGTTTGGTACAACACGGACAAGTCTTGCTTGA
TACGTGTTGACGAGCGGTACGAGTTAGGAAGACGGGGTGCAAGTCCTGCT
CTGTACGTTTGTGGACCCTCTTGAAAAGCCTTGCCTGGGTGTCGATGTAC
GGCACCGTTCGAGTCTCATCTGCATCACCTCGCGACTGATGCGAAGGTCT
TGTGAAGTGTTGACCGCTGCAAGTATTGTTGATTAGTCTGGTCTCCGGAA
GCTCCGCCCCCTGATTGTAAATTTTGCAAAGAAAACGGTCTCGTTTTTCC
GTCCGAGGTGTGTCGGTGATGCCTCCCAGCACCTACACCACTCCCTCGAA
AGGAATGAGTTCCCCTCGTGCTTTGTTCCCACGCTCTCTTGATGCTTTAC
GCGACCGTTCCCGCCGACTCTTGTCTGCTGATTTTGCCAGGGTTCATGTG
TCAAGGAGGCGACTTCGAGAGGCGCAACGGCACCGGTGGCGAGAGTATCT
ACGGTGGGAAGTTTAAGGACGAGCCGGCTGGCCTGAAGCTCAAGCACAAC
AAGAAACACCTGCTGTCGATGGCCAACGCCGGCAGGAACAGCAACGGCTC
TCAGGTACAAACGTCCTTGCGCTGTCTCGTTTCATGCCGATCGCCAAGTT
TATGCGTAACGTTTTCGGTTGCTGTCCACCGGGGAACTTCACCTGTTTTG
ACTCGAGACTGCGCTGAAGCATATAAACGCTGCGGTTGAAAGGGTTGGGA
GGTCCAGCGTCGAAGCAACCTTCCCCAGAGGGCTTTTTGCGTGGCAACAG
GGTTCCAGAACCGTAGGAATCAAGGCGGCGTGCGAGAGTGCGCTTGTTGT
TTTAGGGCGCAGCAGTGCTCTATGTACCTTTGTTTTGACCAAGGCTAAGA
CCTTAGAAGACAGGGAAGACTAGAGCCGAACTGATTTGCACTAGAGATCA
ACGCTACGGCAGCCAGGTGATGGATGACTACTCGAAAATACATTCTCCAG
GACAGGCTATCCTGTCTTTTTTAAGAAAGAAGGCATGTCGAAATCGGGAC
TCGCTTCTCACTAACAGTGTTCAACGAACAATAAGCAAACGGATTTCAAC
GTTTGCCGAAATGAGGATTGTAACGCGCAAAACGATCGCCCAACCCGACA
CCAATTTCGCTCTGCTTGAGGTGTGTCGAAGTTCCTTCCCCTGGACGACC
TCGTGTCCTGTGTTCCCTTCCCACCCCGAACTGTGTGTGTTGCTGATGCC
CAAATCTCCAGTTTTTCATCACAACCCACCCGGCGAGCCACCTCGATGGA
CTCCACGTAGTGTTTGGAGAGCTCGAGTCCGGTGCGGACACGCTTGCGAA
GATGTCCGAGGTCGAGACCGATAAGAAGGACGCTCCGATCTCCCTCCAGA
GGGTGATCATCGAAGACTGCGGGGAGCTGCTCGCCAGCCGCAGTTCCTCC
TCCAAGCATCACCGTCGCCACAGCAGCCGCGACGTCGGGAGGGAAGAGGA
GGCGGGCGGGGGCGACAGCGACGACGGCAGGGCGAACGGGGTAGGGAGCG
GGATGAAGAAGAGGCAAAGCGGTGGTGCCGCAAGAGACGCTCCGGACAAG
AAGAAGGAGAAGAGGGACCGGAAGGCGCTGAAGAAGGAGAGGAAGAAGGA
AAAGAAGGCCGAGAAGAAGCGCCTCAAGAAGAGCAAGAGGAAGGGCGAGG
AGGGAGAAGGCAAGAAGAAGCAGAAGAAGCACCGCCGTCATCACCGCCGT
CACGACGACTCCGACGGCGGCAGCAGCTCGTCCGACGACTCCAGCGGCGA
GGACTCGGACGCGTCTGGCGGGGGGGCGGATCGCAAGCGCCGCAAGCGCG
AGAGCAAGAAGGCCAAGCACGCCGCCAAGAAGTCCAGCAGCAAGGACGCC
AAGAAGAAGGAGAAGCGGGCCGTCCAGAGCAGCGGCAGCAGCAGCAGCAG
CAGCGGAAGCAGCAGCGACGAAGGCGATAACGCCCCCCGCGGCGGCGGCG
GTGGCGGCCACGGAAAGGGGGGCGACCACCACCGCGCAGTCGGGAACGGG
GTGTCGGCCGCGAGCAAGGAGAACGGCTCTCGGTCTTCCAAGCCGGCGAA
CGGCAGCAGCAGCCGCCACGCCGCTCCCGAGGGGAGGCGAGCCGTAAGCC
CGTCGCCGCCGAAGAGAGAAGCAGCAACCGGGCGCCATGGGAGGAGCCGC
AGCCGCGGCCGCGGCAGCAAGAGCCCCGCCGCGCGGCAGGACAAGAGCGC
CAGCAACGCCCAGGATGCGCCGGACGACGGACGCACCCGCTACAAGGGCC
GCGGTGGCCGCGTGTATCGCACTCCTTCCCCCGTGCGCGGCGGCAGGGCG
GACAGGGACAGGGACGACCGGTACAACAACCGGCCCCGTGACGGTGGTGG
CCGGGACGGCGGCGGGCGGTACGGGGACCGAAGTGGAGCGTGGGACCGCG
ACCGGCGCGACCGCGATCTCGACAACAGGGGAGGGGGGGCACGCGGCCGG
TACGACGTGGGCAGGGGGGGGAGGCGTGAGCCGTACGAGGGGCGGTACCA
ACAGTCAGGGCTGAACTACAGCGCCCAGGCGGGGCGGCGCCGCAGCAGCA
GGAGCAGGAGCAGGAGCAAGAGGAGGGGCGGCGGGGATGGGGGAGGCAGG
CGAGGAGGGCGAGACTCCCGCTCGCCGCCTCCTCGGAGGAGGTCACCCGT
TCGCCGTGGCGGCGGCTGGCGGGGCTCTCGGAGCCCGGCCCCCCGCGCCC
GGAGGTCTCGCTCCCGGTCATCCTCGCGCAGCAAGAACAGGCGCTCTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5821:171..4619+

>mRNA_Ecto-sp13_S_contig5821.16286.1 ID=mRNA_Ecto-sp13_S_contig5821.16286.1|Name=mRNA_Ecto-sp13_S_contig5821.16286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1764bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5821:171..4619+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTCCCGCGGCGCCGACACGATGCTTCTTCGACGTAGCAATCGGTGG
CGAAGCAGCTGGGAGGATGGTGTTCAAGCTCTACACCGAGACGGTGCCCT
TGACCGCGGAGAACTTCCGGTGCCTGTGCACCGGCGAGAAGGGAGAGGGC
AGAACCACGGGTAGGATGCTGCACTACAAAGGTGTCCCCTTCCACCGCGT
GATTCCAGGGTTCATGTGTCAAGGAGGCGACTTCGAGAGGCGCAACGGCA
CCGGTGGCGAGAGTATCTACGGTGGGAAGTTTAAGGACGAGCCGGCTGGC
CTGAAGCTCAAGCACAACAAGAAACACCTGCTGTCGATGGCCAACGCCGG
CAGGAACAGCAACGGCTCTCAGTTTTTCATCACAACCCACCCGGCGAGCC
ACCTCGATGGACTCCACGTAGTGTTTGGAGAGCTCGAGTCCGGTGCGGAC
ACGCTTGCGAAGATGTCCGAGGTCGAGACCGATAAGAAGGACGCTCCGAT
CTCCCTCCAGAGGGTGATCATCGAAGACTGCGGGGAGCTGCTCGCCAGCC
GCAGTTCCTCCTCCAAGCATCACCGTCGCCACAGCAGCCGCGACGTCGGG
AGGGAAGAGGAGGCGGGCGGGGGCGACAGCGACGACGGCAGGGCGAACGG
GGTAGGGAGCGGGATGAAGAAGAGGCAAAGCGGTGGTGCCGCAAGAGACG
CTCCGGACAAGAAGAAGGAGAAGAGGGACCGGAAGGCGCTGAAGAAGGAG
AGGAAGAAGGAAAAGAAGGCCGAGAAGAAGCGCCTCAAGAAGAGCAAGAG
GAAGGGCGAGGAGGGAGAAGGCAAGAAGAAGCAGAAGAAGCACCGCCGTC
ATCACCGCCGTCACGACGACTCCGACGGCGGCAGCAGCTCGTCCGACGAC
TCCAGCGGCGAGGACTCGGACGCGTCTGGCGGGGGGGCGGATCGCAAGCG
CCGCAAGCGCGAGAGCAAGAAGGCCAAGCACGCCGCCAAGAAGTCCAGCA
GCAAGGACGCCAAGAAGAAGGAGAAGCGGGCCGTCCAGAGCAGCGGCAGC
AGCAGCAGCAGCAGCGGAAGCAGCAGCGACGAAGGCGATAACGCCCCCCG
CGGCGGCGGCGGTGGCGGCCACGGAAAGGGGGGCGACCACCACCGCGCAG
TCGGGAACGGGGTGTCGGCCGCGAGCAAGGAGAACGGCTCTCGGTCTTCC
AAGCCGGCGAACGGCAGCAGCAGCCGCCACGCCGCTCCCGAGGGGAGGCG
AGCCGTAAGCCCGTCGCCGCCGAAGAGAGAAGCAGCAACCGGGCGCCATG
GGAGGAGCCGCAGCCGCGGCCGCGGCAGCAAGAGCCCCGCCGCGCGGCAG
GACAAGAGCGCCAGCAACGCCCAGGATGCGCCGGACGACGGACGCACCCG
CTACAAGGGCCGCGGTGGCCGCGTGTATCGCACTCCTTCCCCCGTGCGCG
GCGGCAGGGCGGACAGGGACAGGGACGACCGGTACAACAACCGGCCCCGT
GACGGTGGTGGCCGGGACGGCGGCGGGCGGTACGGGGACCGAAGCGGGGC
GGCGCCGCAGCAGCAGGAGCAGGAGCAGGAGCAAGAGGAGGGGCGGCGGG
GATGGGGGAGGCAGGCGAGGAGGGCGAGACTCCCGCTCGCCGCCTCCTCG
GAGGAGGTCACCCGTTCGCCGTGGCGGCGGCTGGCGGGGCTCTCGGAGCC
CGGCCCCCCGCGCCCGGAGGTCTCGCTCCCGGTCATCCTCGCGCAGCAAG
AACAGGCGCTCTAG
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