prot_Ecto-sp13_S_contig58164.16278.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig58164.16278.1
Unique Nameprot_Ecto-sp13_S_contig58164.16278.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length96
Homology
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BLAST of mRNA_Ecto-sp13_S_contig58164.16278.1 vs. uniprot
Match: D8LL88_ECTSI (Rab32B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL88_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 4.380e-56
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0 
Query:    6 GMQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQNEGCDLPVYLFANKCDLLKEVQDSFLAGARMEK 96
            G QVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQNEGCDLPVYLFANKCDLLKEVQDSFLAGARMEK
Sbjct:  398 GRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQNEGCDLPVYLFANKCDLLKEVQDSFLAGARMEK 488
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BLAST of mRNA_Ecto-sp13_S_contig58164.16278.1 vs. uniprot
Match: A0A836CPW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPW2_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.970e-41
Identity = 66/91 (72.53%), Postives = 80/91 (87.91%), Query Frame = 0 
Query:    6 GMQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQNEGCDLPVYLFANKCDLLKEVQDSFLAGARMEK 96
            G  VRLQLWDIAGQDRFA+LTRAYFRRA+ AVVVCD+TREGT++A+ RWK+E+D+WC  EGC +PV+L ANKCDLL + Q+SFL GA+MEK
Sbjct:  411 GTCVRLQLWDIAGQDRFARLTRAYFRRARAAVVVCDITREGTYEAVSRWKDELDVWCTTEGCKIPVFLIANKCDLLTDAQESFLMGAKMEK 501
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BLAST of mRNA_Ecto-sp13_S_contig58164.16278.1 vs. uniprot
Match: W7U2E0_9STRA (Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2E0_9STRA)

HSP 1 Score: 122 bits (305), Expect = 7.080e-31
Identity = 58/91 (63.74%), Postives = 68/91 (74.73%), Query Frame = 0 
Query:    6 GMQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQNEGCD--LPVYLFANKCDLLKEVQDSFLAGARM 94
            G  VRLQLWDIAGQDRF  LTR YF RAKG +VVCD+TRE TF+A+  WK EID W + EG +  +PV L ANKCD+L +  DSF+AGA M
Sbjct:  278 GRPVRLQLWDIAGQDRFVHLTRVYFTRAKGVLVVCDLTREKTFEAVRSWKLEIDEWARTEGREGGIPVVLIANKCDMLTDAADSFVAGANM 368
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BLAST of mRNA_Ecto-sp13_S_contig58164.16278.1 vs. uniprot
Match: G4ZV73_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZV73_PHYSP)

HSP 1 Score: 115 bits (287), Expect = 6.560e-30
Identity = 54/95 (56.84%), Postives = 66/95 (69.47%), Query Frame = 0 
Query:    4 DLGMQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQ--NEGCDLPVYLFANKCDLLKEVQDSFLAGARMEK 96
            D  + + LQLWDIAGQDRFAK TR YFR AKGAV+VCD+TR  T DA+V WK EID  C+  NEG ++PV + ANK DLL +   +   G  M+K
Sbjct:   45 DEHLTISLQLWDIAGQDRFAKFTRGYFREAKGAVIVCDITRANTIDAVVNWKNEIDTCCKDLNEGAEIPVVMVANKSDLLMDPMGALDLGVNMQK 139
[Close]
BLAST of mRNA_Ecto-sp13_S_contig58164.16278.1 vs. uniprot
Match: D0NC70_PHYIT (Rab32/38 family GTPase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NC70_PHYIT)

HSP 1 Score: 113 bits (283), Expect = 2.210e-29
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 0 
Query:    4 DLGMQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQ--NEGCDLPVYLFANKCDLLKEVQDSFLAGARMEK 96
            D  + + LQLWDIAGQDRFAK TR YFR A+GAV+VCD+TR  T DA+V WK EID  C+  NEG ++PV + ANK DLL +   +   G  M+K
Sbjct:   45 DEQLTISLQLWDIAGQDRFAKFTRGYFREARGAVIVCDITRANTIDAVVNWKNEIDTCCKDLNEGAEIPVVMVANKSDLLLDPMGALDLGVNMQK 139
[Close]
BLAST of mRNA_Ecto-sp13_S_contig58164.16278.1 vs. uniprot
Match: D0NCF8_PHYIT (Rab32/38 family GTPase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NCF8_PHYIT)

HSP 1 Score: 113 bits (283), Expect = 2.210e-29
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 0 
Query:    4 DLGMQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQ--NEGCDLPVYLFANKCDLLKEVQDSFLAGARMEK 96
            D  + + LQLWDIAGQDRFAK TR YFR A+GAV+VCD+TR  T DA+V WK EID  C+  NEG ++PV + ANK DLL +   +   G  M+K
Sbjct:   45 DEQLTISLQLWDIAGQDRFAKFTRGYFREARGAVIVCDITRANTIDAVVNWKNEIDTCCKDLNEGAEIPVVMVANKSDLLLDPMGALDLGVNMQK 139
[Close]
BLAST of mRNA_Ecto-sp13_S_contig58164.16278.1 vs. uniprot
Match: K3X7B8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7B8_GLOUD)

HSP 1 Score: 115 bits (288), Expect = 6.750e-29
Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 0 
Query:    4 DLGMQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQ--NEGCDLPVYLFANKCDLLKEVQDSFLAGARMEK 96
            D  +++ LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TRE T DAIV WK EIDL  +  N+G  +PV + ANK DLL +   +   G  M+K
Sbjct:  170 DAQLKISLQLWDIAGQDRFAKLTRAYFREAKGALIVCDITRENTIDAIVNWKSEIDLCSRDLNDGESIPVVMVANKSDLLDDPVGALNIGVNMQK 264
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BLAST of mRNA_Ecto-sp13_S_contig58164.16278.1 vs. uniprot
Match: A0A2D4BRT2_PYTIN (Rab32/38 family GTPase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRT2_PYTIN)

HSP 1 Score: 115 bits (288), Expect = 7.410e-29
Identity = 55/95 (57.89%), Postives = 70/95 (73.68%), Query Frame = 0 
Query:    4 DLGMQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQ--NEGCDLPVYLFANKCDLLKEVQDSFLAGARMEK 96
            D  +++ LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TRE T DA+V WK EID+ C+  N G  +PV + ANK DLL++   +   G  M+K
Sbjct:  182 DDNLRLHLQLWDIAGQDRFAKLTRAYFRDAKGALIVCDITRENTIDAVVTWKSEIDVCCKDLNHGEVIPVVMVANKSDLLQDPMGALNIGVNMQK 276
[Close]
BLAST of mRNA_Ecto-sp13_S_contig58164.16278.1 vs. uniprot
Match: H3GIE7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIE7_PHYRM)

HSP 1 Score: 115 bits (287), Expect = 8.320e-29
Identity = 55/95 (57.89%), Postives = 66/95 (69.47%), Query Frame = 0 
Query:    4 DLGMQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQ--NEGCDLPVYLFANKCDLLKEVQDSFLAGARMEK 96
            D  + + LQLWDIAGQDRFAK TR YFR AKGAV+VCD+TR  T DA+V WK EID  C+  NEG ++PV L ANK DLL +   +   G  M+K
Sbjct:  175 DDQLTISLQLWDIAGQDRFAKFTRGYFREAKGAVIVCDITRANTIDAVVTWKNEIDTCCKDLNEGAEIPVVLVANKSDLLTDPMGALDLGVNMQK 269
[Close]
BLAST of mRNA_Ecto-sp13_S_contig58164.16278.1 vs. uniprot
Match: A0A3R7NCY6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NCY6_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.620e-28
Identity = 52/95 (54.74%), Postives = 66/95 (69.47%), Query Frame = 0 
Query:    4 DLGMQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQ--NEGCDLPVYLFANKCDLLKEVQDSFLAGARMEK 96
            D  + + LQLWDIAGQDRFAK TR YFR AKGAV+VCD+TR  T +A+  WK EID+ C+  N+G ++PV + ANK DLL    D+   G  M+K
Sbjct:  104 DDQLTISLQLWDIAGQDRFAKFTRGYFREAKGAVIVCDITRANTIEAVENWKNEIDMCCKDLNDGTEIPVVMVANKSDLLVNPMDALDLGVNMQK 198
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig58164.16278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL88_ECTSI4.380e-5698.90Rab32B, RAB family GTPase n=2 Tax=Ectocarpus TaxID... [more]
A0A836CPW2_9STRA1.970e-4172.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U2E0_9STRA7.080e-3163.74Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=... [more]
G4ZV73_PHYSP6.560e-3056.84Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
D0NC70_PHYIT2.210e-2955.79Rab32/38 family GTPase, putative n=2 Tax=Phytophth... [more]
D0NCF8_PHYIT2.210e-2955.79Rab32/38 family GTPase, putative n=1 Tax=Phytophth... [more]
K3X7B8_GLOUD6.750e-2958.95Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4BRT2_PYTIN7.410e-2957.89Rab32/38 family GTPase, putative n=1 Tax=Pythium i... [more]
H3GIE7_PHYRM8.320e-2957.89Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3R7NCY6_9STRA1.620e-2854.74Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 2..24
score: 37.17
coord: 67..80
score: 40.1
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..96
e-value: 1.5E-6
score: -27.8
NoneNo IPR availableGENE3D3.40.50.300coord: 1..94
e-value: 5.0E-23
score: 83.2
NoneNo IPR availablePANTHERPTHR24073:SF862RAS-RELATED PROTEIN RAB-32coord: 8..84
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 8..84
NoneNo IPR availablePROSITEPS51419RABcoord: 1..96
score: 13.656
IPR001806Small GTPasePFAMPF00071Rascoord: 6..83
e-value: 4.5E-19
score: 68.6
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 6..82
e-value: 9.1E-12
score: 43.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig58164contigEcto-sp13_S_contig58164:68..742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig58164.16278.1mRNA_Ecto-sp13_S_contig58164.16278.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig58164 68..742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig58164.16278.1 ID=prot_Ecto-sp13_S_contig58164.16278.1|Name=mRNA_Ecto-sp13_S_contig58164.16278.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=96bp
MLVDLGMQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDA
IVRWKEEIDLWCQNEGCDLPVYLFANKCDLLKEVQDSFLAGARMEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase