mRNA_Ecto-sp13_S_contig5816.16277.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A6H5JKX8_9PHAE (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX8_9PHAE) HSP 1 Score: 567 bits (1461), Expect = 2.250e-201 Identity = 278/290 (95.86%), Postives = 284/290 (97.93%), Query Frame = 1
Query: 1 MALKLPARCPVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEEGVASEDVVAGLVTLGSPHFAGPMDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKDAPRRSRARFAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLVTVAQELRPSGSKGDGMASFSEMFPAPFAKLFS 870
MALKLPA+ PVVILPGFGNDARDYTNPLDGGEDKAFA ALERRG+KTFVV VERSDWLKVASAVLTLDFWKGTCRP+GPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALA+GMWEEGVASEDVVAGLVTLGSPHFAGPMDMTRGALTFTSDEYPGAFLKD+GIFYVTVGGAAL+G KDAPRRSRARFAYGSYQTVCGEGATMGDACVPLVY HLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLVTVAQELRPSGSKGDGMASFSEMF APFAKLFS
Sbjct: 33 MALKLPAKFPVVILPGFGNDARDYTNPLDGGEDKAFASALERRGLKTFVVAVERSDWLKVASAVLTLDFWKGTCRPNGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAKGMWEEGVASEDVVAGLVTLGSPHFAGPMDMTRGALTFTSDEYPGAFLKDKGIFYVTVGGAALLGEKDAPRRSRARFAYGSYQTVCGEGATMGDACVPLVYTHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLVTVAQELRPSGSKGDGMASFSEMFSAPFAKLFS 322
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A0G4FYU4_VITBC (GPI inositol-deacylase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FYU4_VITBC) HSP 1 Score: 275 bits (702), Expect = 3.500e-85 Identity = 146/291 (50.17%), Postives = 180/291 (61.86%), Query Frame = 1
Query: 28 PVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETV---RTSLEETGA--DKVLLVGHSAGGWLARAALAEGMWEEGVASE----------DVVAGLVTLGSPHFAGP---MDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKDAPRRSRARFAYGSYQTVCGEG-ATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLVTVAQELRP------SGSKGDGMA 825
P+VILPGFGNDA DYTNP+ GED + ALERRG +VVP+ R +WL VA LT FW G CRPDGP + WYL +V+ TV R GA KV+LVGHSAGGWLARA + +G W E D+V G+++LGSPH+ P +DMTRG LT+ EYPG F K++GIFYV+V G A+ G A R + RFA+ SY+ VCG G GD VPL A+L+G+ VT+ GV+HS++ PD WYGSE VVD WL EL+ G KG G A
Sbjct: 91 PIVILPGFGNDALDYTNPMKMGEDTSLKAALERRGYNVYVVPIARREWLSVARDFLTRRFWTGECRPDGPGFRWYLDRVRTTVDRVRRRDWPGGALPPKVVLVGHSAGGWLARAVMGDGTWRNETDEETGESTVEYTQDIVQGVISLGSPHYPPPPPALDMTRGVLTYVCREYPGTFHKEKGIFYVSVVGDAVTGDVQADRGTLERFAFQSYEVVCGSGDGVRGDGVVPLRSAYLDGSRCVTMSGVYHSINVPDSWYGSENVVDTWLAAAQDELQQMTTTGREGGKGSGAA 381
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A835Z797_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z797_9STRA) HSP 1 Score: 256 bits (655), Expect = 1.660e-79 Identity = 137/261 (52.49%), Postives = 163/261 (62.45%), Query Frame = 1
Query: 16 PARCP-VVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEEG----------VASEDVVAGLVTLGSPHFAGPMDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKDAPRRSRARFAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDR 765
P +CP VILPGF N DY NP + G + + L RRGV ++V+P+ER +W V FW+G P+ AY WYL+KV+ TV + EETGA KV L GHSAGGWLARAAL +G W V SEDVV G+VTLG+PHF PGAFLKDRG+ YVTV GAA+ G KDAPR AR AY SYQ VCGEG T GD CVP+V AHLEGA Q+TLDGV H+VD P+ WYG++ + R
Sbjct: 62 PVKCPPFVILPGFSNADMDYFNPFNQGYETSLVAGLARRGVTSYVLPLERKEWFNVVRGFREAAFWRGAAPPEC-AYGWYLEKVRATVALAREETGAPKVALCGHSAGGWLARAALGDGTWSTERDASGQAAAIVRSEDVVCGVVTLGAPHF------------------PGAFLKDRGVQYVTVAGAAIRGAKDAPRADPARRAYNSYQLVCGEGETDGDGCVPVVSAHLEGALQITLDGVKHTVDTPNTWYGTDENIGR 303
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: W7T4S9_9STRA (AB hydrolase-1 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4S9_9STRA) HSP 1 Score: 248 bits (633), Expect = 4.540e-76 Identity = 136/264 (51.52%), Postives = 166/264 (62.88%), Query Frame = 1
Query: 28 PVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEEGVASE--DVVAGLVTLGSPHF--AGP-MDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKD---APRRSRAR-----FAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLVTV 780
PVVI PGFGND DY NP++ GE+ AL RRG +VVPV+R+DWLK A+ + T FW T P ++ WYL KV +TV + E K L+VGHSAGGWLARAAL +G W A E D+V G VTLG+PH A P + +TRGAL YPGAFLK +G+FY+TV G A+ G ++ A RR R FA+ SY VCG G +GD VPL AHLEGA+QV L VFHS++ P WYGSE V+D WL V
Sbjct: 45 PVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRREPQGAGRRERRGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPKAWYGSEEVIDSWLGEV 308
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A7S4K5P4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K5P4_9STRA) HSP 1 Score: 239 bits (610), Expect = 4.870e-72 Identity = 131/285 (45.96%), Postives = 174/285 (61.05%), Query Frame = 1
Query: 28 PVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKT---FVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMW--EEGVASEDVVAGLVTLGSPHFAGPMD----MTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVG---------VKDAPRR-------SRARFAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKP------DEWYGSEGVVDRWLVTVAQE 789
PVVI PGFGND DY PL D ALERRG ++PV+R+DWL+VA +L LDF+ G +P G Y WY+ ++K+TV + EE+G ++VLL+GHSAGGWLARAA+ +G W E G+ + D V L T+G+ H P D +TRGAL +T YPGA+L GI YV+VGG A+VG DA S +R A+ SY++VCG+G GD VPL + LEGA Q+ L+GV HS+++ D WYGSEG++D+WL V +E
Sbjct: 46 PVVICPGFGNDEIDYVEPLKQPRDVGLVSALERRGFDPDLISIIPVKRTDWLRVAGGLLDLDFYTGNAKPTGGGYGWYVDRLKKTVDMAHEESGGERVLLLGHSAGGWLARAAMGDGTWCPEGGIRTADRVRCLATVGAIHRT-PEDASTCVTRGALGYTDSSYPGAYLSGEGIGYVSVGGDAIVGDNAKIAAVETTDADELYAARGEGSASRVAFTSYESVCGQGGVTGDGVVPLDWTRLEGARQIRLEGVVHSINEAGTTIPTDRWYGSEGIIDQWLPAVLEE 329
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A4D9CVP3_9STRA (GPI inositol-deacylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVP3_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.420e-71 Identity = 130/262 (49.62%), Postives = 161/262 (61.45%), Query Frame = 1
Query: 37 ILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEEGVASE--DVVAGLVTLGSPHF--AGP-MDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKDAPRRSRAR---------FAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLVTV 780
+ GFGND DY NP + GE+ AL RRG +VVPV+R+DWLK A+ + T FW T P ++ WYL KV +TV + E K L+VGHSAGGWLARAAL +G W A E D+V G VTLG+PH A P + +TRGAL YPGAFLK +G+FY+TV G A+ G ++ PR + R FA+ SY VCG G +GD VPL AHLEGA+QV L VFHS++ P WYGSE V+D WL V
Sbjct: 37 VPAGFGNDQIDYLNPRNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRRE-PRGAGGRERGGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPKAWYGSEEVIDSWLGEV 297
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A2P6V313_9CHLO (GPI inositol-deacylase PGAP1-like isoform A n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V313_9CHLO) HSP 1 Score: 234 bits (596), Expect = 1.770e-70 Identity = 136/279 (48.75%), Postives = 173/279 (62.01%), Query Frame = 1
Query: 28 PVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEEGVA--SEDV-----------VAGLVTLGSPHFAGP----MDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGVKDAPRRSRARFAYGSYQTVCGEG-ATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKPDE--------WYGSEGVVDRWLVTVAQ 786
P+V+LPGFGN DYT P G E+ + A AL+RRG + +V+PVER DW KVA A+LTL +W+G P YSWYL++V E V + ETG+++V LV HSAGGWLARA + +G + +G A SED V LVTLG+PH P DMT GALT+ +PGA +G+ YV V G A+ G +DA RR+ + +A GSYQ VCGEG T GDA VPL A LEGA+ V LDGVFHS+ + WYG E V+D WL T+ +
Sbjct: 40 PIVLLPGFGNCTADYTAPF-GDEEASVAAALQRRGFRCYVLPVERKDWFKVARALLTLAYWRGASTTH-PGYSWYLERVAELVDQARRETGSEQVDLVAHSAGGWLARAFIGQGEYRQGGANASEDTLGSAELEPHPAVRALVTLGTPHTPPPPDKVKDMTGGALTWVDATWPGACFAGQGVRYVAVAGRAVRGDRDADRRTLSGYAAGSYQQVCGEGHETEGDAVVPLRSALLEGADHVMLDGVFHSMSRVRTFNEPSGLPWYGDERVLDAWLHTLVR 316
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A7S2MKJ9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MKJ9_9STRA) HSP 1 Score: 234 bits (597), Expect = 3.460e-70 Identity = 127/298 (42.62%), Postives = 178/298 (59.73%), Query Frame = 1
Query: 22 RCPVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTF-VVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEE--GVASEDVVAGLVTLGSPHFAGP---MDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGV----KDAPRRSR---------------ARFAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKP------DEWYGSEGVVDRWLVTVAQELRPSGSKGDGM 822
+ P+VI PGF ND DY +PL + F L+RRG + +V V+RSDW++VA + ++F++ P G Y WY++++KE V + EE+G +KV+LVGHSAGGWLARAA+ +G+W+E GV + D + L T+G+ H P TRGAL +T+ EYPGAFL + G+ YVTVGG A++G KD R A+ A+ SY+ VCGEG+ GD VPL + LEGA + L+GV HS+++ D WYGSE V+DRWL V +E +K G+
Sbjct: 40 KTPIVICPGFFNDEIDYISPLQQPPEVGFVSGLQRRGFTSISIVNVKRSDWVRVAGGLFDINFYRNKALPTGNGYGWYIERLKEAVDRAYEESGGEKVMLVGHSAGGWLARAAMGDGVWDEEGGVKTADRIRCLTTVGAIHKPPPELGSCSTRGALAYTNTEYPGAFLAEEGVTYVTVGGDAVMGYDSKKKDEVNEGREAVDEIYAVRGEGSSAKVAFDSYEIVCGEGSVTGDGVVPLEWTMLEGARHIALEGVLHSINEAGTTVPTDRWYGSEKVLDRWLPVVLEEAGLVENKKSGL 337
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A448YV45_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV45_9STRA) HSP 1 Score: 233 bits (595), Expect = 1.260e-69 Identity = 139/328 (42.38%), Postives = 190/328 (57.93%), Query Frame = 1
Query: 4 ALKLPARCPVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGV---KTFVVPVERSDWLKVASAVLTLD-FWKGTCRPDGPAYSWYLQKVKETVRTSLEE------TGADKVLLVGHSAGGWLARAALAEGMWEEGVASE---------DVVAGLVTLGSPHFAGPMD----MTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVG------VKDAP---RRSRA-------------RFAYGSYQTVCGEGATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKP------DEWYGSEGVVDRWLVTVAQELRPSGSKGDGMASFS 834
A + A CPVVI PGFGND+ DY PL+ E+ L RRG + ++VPV+RSDW++VA + + F+ GT +P GP Y W ++++KETV + + +G KVL++GHSAGGWLARAA+A+G+W EG A E D + LVT+G+ H A P D +TRGAL +T++ YPGAFLKD GI YV++GG+A+VG KDA RS A R A+ SY+ V G G +GD VPL + LEG+ Q+ L V HS+++ D WYGSE V+DRWL V +E + +K F+
Sbjct: 32 AKQATAFCPVVICPGFGNDSIDYVAPLEQPEEVGLKSVLARRGFDPSQIYIVPVQRSDWIRVAGGLFDIPGFYLGTAKPTGPGYGWXVKRLKETVDLAYDNQAGESTSGKQKVLVIGHSAGGWLARAAMADGLWSEGGAGEEPSSPVRTSDRIRCLVTMGAIH-AAPEDESTCVTRGALRYTAENYPGAFLKDEGIGYVSIGGSAIVGDERKDDEKDADTDQERSEADEFYKQRGEGNSNRVAFTSYKAVSGNGNLIGDGVVPLDWTQLEGSRQIVLPDVLHSINEAGTTFPTDRWYGSEKVIDRWLPAVMEEADLAPAKNGNAFDFA 358
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Match: A0A7S2ERA3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ERA3_9STRA) HSP 1 Score: 229 bits (584), Expect = 4.240e-68 Identity = 131/297 (44.11%), Postives = 172/297 (57.91%), Query Frame = 1
Query: 28 PVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTF-VVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARAALAEGMWEE--GVASEDVVAGLVTLGSPHFAGPMDM----TRGALTFTSDEYPGAFLKDRGIFYVTVGGAALVGV-------------------KDAPRRSRARFAYGSYQTVCGE-GATMGDACVPLVYAHLEGAEQVTLDGVFHSVDKP------DEWYGSEGVVDRWLVTVAQELRPSGSKGDG 819
P+VI PGF ND DY PL + F ALERRG +V ++RSDW++VA +L +F+ P G Y WY+ ++K T+ + EE+G +KVL++GHSAGGWLARAA+A G+W E GV + D V L T+G+ H P+D+ T+GAL FT EYPG FLK+ GI YVTVGG A+VG+ K S A+ AY SY+ V G+ G GD VPL + LEGA + L+GV HS+++ D WYGSEGV+DRWL V +E K G
Sbjct: 50 PIVICPGFFNDEIDYVEPLKQPREIGFVSALERRGFTNISIVNIKRSDWVRVAGGLLDPNFYFNKALPTGGGYGWYIARLKATIDAAYEESGGEKVLVIGHSAGGWLARAAMANGVWNESEGVKTADRVRCLTTVGAIHRP-PVDLNSCATKGALAFTDREYPGVFLKEDGISYVTVGGDAVVGINSKLTDKINDDREEADEVYKVRGEGSSAKVAYDSYEIVSGQNGGVTGDGVVPLEWTKLEGARNIVLEGVLHSINEAGTTVATDRWYGSEGVIDRWLPVVLEEAGLVEKKNTG 345 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5816.16277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5816.16277.1 >prot_Ecto-sp13_S_contig5816.16277.1 ID=prot_Ecto-sp13_S_contig5816.16277.1|Name=mRNA_Ecto-sp13_S_contig5816.16277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp MALKLPARCPVVILPGFGNDARDYTNPLDGGEDKAFAPALERRGVKTFVVback to top mRNA from alignment at Ecto-sp13_S_contig5816:2456..7290+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5816.16277.1 ID=mRNA_Ecto-sp13_S_contig5816.16277.1|Name=mRNA_Ecto-sp13_S_contig5816.16277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4835bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5816:2456..7290+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5816:2456..7290+ >mRNA_Ecto-sp13_S_contig5816.16277.1 ID=mRNA_Ecto-sp13_S_contig5816.16277.1|Name=mRNA_Ecto-sp13_S_contig5816.16277.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5816:2456..7290+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |