mRNA_Ecto-sp13_S_contig5813.16274.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5813.16274.1 vs. uniprot
Match: D7FSJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ2_ECTSI) HSP 1 Score: 1342 bits (3474), Expect = 0.000e+0 Identity = 811/1047 (77.46%), Postives = 840/1047 (80.23%), Query Frame = 1
Query: 1 GETCEDYGSSPYSGMVNFDNLLWSLLTLFTVTTLEGWHEVMMFTQRVMSEYTIWFFVFLIVTATWAIMSLMIAAMLARFKAVSLAEGLRLMRERAEARAARQVEARGRAKKGKRMLGSAAEGVKGVVTKGGAEVGGAIARGXXXXXXXXXDILAAGPNLAAGLITLHAESKPEGKTARVVRQSTGLWQSIIWYARHPLVEDQVLSEDSLFSQAIHWAIILNVVVIGMGGHNIGDKKAAVLHDMETVLTIIFTVEVVLKNVVLGSGRYFKSRRVEEEVH*WNWFDFFVSMSSLLHLIVTTLVDDLAVTASLRLLNXXXXXXXXXXXXXXXXXXXXXXVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQVFTVIAGDSWNTIMYRTMENTTAVSALFFVALIVLGESVLLNLVLAVVLEGASDQMKEKHAAQQFRDNTLRLFHNQYKRLAMRRWSAKTRAEAMLERGQVLVLPGDTAEKLGLEDFPKPTPYRPGRPSSSSSSSAVFDVAAFPASDTSASPRNGGLVLSRREGHALRAPPPPSVRSSSLSLRHPLPPTPSSCFLPLPQSHRQTDVGASAQTPLQEAATAAHAAAAQEGAADIISGTRHGVSDGDRSDENRLVRRDTSSPKAEADRHVTSPHELXXXXXXXXXXXRVWDAGWERERRKKSPRGRTGCEPRGQGKSVRGGQEKGMSAGREDSAAHSAASVSEGRPLSATSEKAMEDERCLETTAAEELMTPTEEFDKVWEKSWERQYEGKKSPRCRPSASSGGEEDNGHGAQNIGRNATAAGGKDVGSPVGEEGSRLLVAGQALAHDERPERDPAETSMTPPEEFDRVRGKSWERQHKGKKSPRPRPSAPSGGEED----------------------------------------------------------------------------------------NGHGAHNIGRNVPTAGGGGIRLPVGEDRNRLLVADEALVHNERPERTNAKKLMTPPDGFDSSWQKDW 2877
GETC+DYGSSPYSGMVNFDNLLWSLLTLFTVTTLEGWHEVMMFTQRVMSEYTIWFFVFLIVTATWAIMSLMIAAMLARFKAVSLAEGLRLMRERAEARAARQVEARGRAKKGK MLG+AAEGVKGVVTKGGAEVGGAIARGXXXXXXXXXDILAAGPNLAAGLIT HAESKPEGKTAR+VRQSTGLWQSI+ YARHPLVEDQVLSEDSLFSQA HWAIILNVVVIGMGGHNIGDKKAAVLHDMETVLTIIFTVEVVLKNV LG+GRYFKSR WN FDFFVSMSSLLHLIVTTLVDDLAVTASLRLLNXXXXXXXXXXXXXXXXXXXXXXVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQVFTVIAGDSWNTIMYRTMENTTAVSALFFVAL+VLGESVLLNLVLAVVLEGASDQMKEKHAAQQFRDNTLRLFHNQYKRLAMRRWSAK RAEAMLERGQVLVLPG+TAEKLGLEDFPKPT YRPGRPSSSSSSSA+FDVAAFP SDTSASPRNG LV SRREGHALRAP HAA AQEGAADI SGTRHGVSDGD SD+NRLVRRDTSSPKAEADRH+ SP+E XXXXXXXXXXX VWD GW+RERRKKS G TGCEPR +G SV G QEKGMSAGREDSAAHSAASVSEGR LSA S KAMEDER L+ TAAEELM+ EEFDKVW KSWERQY+ KKS RPS S G ED+GHG QN RN TAAGGKDVGSPV EEG+RLLVAG+AL HDE PERD A+T MTPP+EFD+VRGKSWERQ+KGKKSPR PSAPSG EED NGHGA NIGR VPTAGGG +R PVGE+RN L+VA EALVH+ERPER NA+KLMTPPDGFDS+WQKDW
Sbjct: 152 GETCQDYGSSPYSGMVNFDNLLWSLLTLFTVTTLEGWHEVMMFTQRVMSEYTIWFFVFLIVTATWAIMSLMIAAMLARFKAVSLAEGLRLMRERAEARAARQVEARGRAKKGKGMLGTAAEGVKGVVTKGGAEVGGAIARGXXXXXXXXXDILAAGPNLAAGLITSHAESKPEGKTARLVRQSTGLWQSIVSYARHPLVEDQVLSEDSLFSQAYHWAIILNVVVIGMGGHNIGDKKAAVLHDMETVLTIIFTVEVVLKNVALGAGRYFKSR--------WNRFDFFVSMSSLLHLIVTTLVDDLAVTASLRLLNXXXXXXXXXXXXXXXXXXXXXXVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQVFTVIAGDSWNTIMYRTMENTTAVSALFFVALVVLGESVLLNLVLAVVLEGASDQMKEKHAAQQFRDNTLRLFHNQYKRLAMRRWSAKLRAEAMLERGQVLVLPGNTAEKLGLEDFPKPTQYRPGRPSSSSSSSAIFDVAAFPVSDTSASPRNGSLVRSRREGHALRAPXXXXXXXXXX-----------------------------------------HAAGAQEGAADI-SGTRHGVSDGDGSDDNRLVRRDTSSPKAEADRHMASPNEFXXXXXXXXXXXXVWDTGWQRERRKKSAHGHTGCEPRSRGNSVGGDQEKGMSAGREDSAAHSAASVSEGRALSARS-KAMEDERRLKPTAAEELMSSPEEFDKVWGKSWERQYKSKKSTGRRPSVPSSGAEDDGHGGQNTKRNTTAAGGKDVGSPVDEEGNRLLVAGEALEHDEHPERDSADTLMTPPKEFDKVRGKSWERQYKGKKSPRRWPSAPSGSEEDDGHGTQNIGRNTTTTGGKYVGSRVGEEGNRLLVAGEALEHDEHPGCDSAKTAMTPQDEFDSVWGRSWERQHKGKKSRRPGAPPSGAEDNGHGAQNIGRKVPTAGGGVVRPPVGEERNLLMVAGEALVHDERPERRNAEKLMTPPDGFDSTWQKDW 1147
BLAST of mRNA_Ecto-sp13_S_contig5813.16274.1 vs. uniprot
Match: A0A6H5K0T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T1_9PHAE) HSP 1 Score: 1338 bits (3462), Expect = 0.000e+0 Identity = 796/1041 (76.46%), Postives = 824/1041 (79.15%), Query Frame = 1
Query: 1 GETCEDYGSSPYSGMVNFDNLLWSLLTLFTVTTLEGWHEVMMFTQRVMSEYTIWFFVFLIVTATWAIMSLMIAAMLARFKAVSLAEGLRLMRERAEARAARQVEARGRAKKGKRMLGSAAEGVKGVVTKGGAEVGGAIARGXXXXXXXXXDILAAGPNLAAGLITLHAESKPEGKTARVVRQSTGLWQSIIWYARHPLVEDQVLSEDSLFSQAIHWAIILNVVVIGMGGHNIGDKKAAVLHDMETVLTIIFTVEVVLKNVVLGSGRYFKSRRVEEEVH*WNWFDFFVSMSSLLHLIVTTLVDDLAVTASLRLLNXXXXXXXXXXXXXXXXXXXXXXVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQVFTVIAGDSWNTIMYRTMENTTAVSALFFVALIVLGESVLLNLVLAVVLEGASDQMKEKHAAQQFRDNTLRLFHNQYKRLAMRRWSAKTRAEAMLERGQVLVLPGDTAEKLGLEDFPKPTPYRPGRPSSSSSSS-----AVFDVAAFPASDTSASPRNGGLVLSRREGHALRAPPPPSVRSSSLSLRHPLPPTPSSCFLPLPQSHRQTDVGASAQTPLQEAATAAHAAAAQEGAADIISGTRHGVSDGDRSDENRLVRRDTSSPKAEADRHVTSPHELXXXXXXXXXXXRVWDAGWERERRKKSPRGRTGCEPRGQGKSVRGGQEKGMSAGREDSAAHSAASVSEGRPLSATSEKAMEDERCLETTAAEELMTPTEEFDKVWEKSWERQYEGKKSPRCRPSASSGGEEDNGHGAQNIGRNATAAGGKDVGSPVGEEGSRLLVAGQALAHDERPERDPAETSMTPPEEFDRVRGKSWERQHKGKKSPRPRPSAPSGGEEDNGHGAHNIGRNVPTAGGGGIRLPVGEDRNRLLVADEALVHNERPERTNAKKLMTPPDGFDSSWQKDWLRQTARRSSRDRRRVSPLRQGKMVFEGRETERQARGQHFVWSLASENGERPREATRDGLEEERATGYANKVRDEAIE 3108
GETCEDYGSSPYSGMVNFDNLLWSLLTLFTVTTLEGWHEVMMFTQRVMSEYTIWFFVFLIVTATWAIMSLMIAAMLARFKAVSLAEGLRLMRERAE VEARGRAKKGKRMLGSAAEGVKGVVTKGGAE+GGAIARGXXXXXXXXXDILAAGPNLAAGLIT HAE AIHWAI+LNVVVIGMGGHNIGDKKAAVLHDMET LTIIFTVEVVLKNVVLG+ R WN FDFFVSMSSLLHLI+TTLVDDL VT VVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQ SVLLNLVLAVVLEGASD MKEKHAAQQFRDNTLRLFHNQYKRLAMRRWSAKTRAEAMLERGQVLVLPG+ AEKLGLEDFPKPTPYRPGRPS AV DVA FPASDTSASPRNGGLVLSR+EGHALRAPPPPSVRSSSLSLRHPLPPTPSSC LPLPQSH QTDVGASAQ PLQEAATAAHAAAAQEGAADI SGTRHGVSDGD+SD+NRLVRRDTSSPKAEADRHVTSP + XXXXXXXXXXXRVWD GW+RERRKKSPRGRTGCEPR QGKSVR GQEKGMSAGREDSAAHSAASVSEGRPLSATSE+AMED R LE TA EEL+TP EE DKVW KSW+RQY+GKKS RPS S EED+GHGAQ+ AAG K VGSPV EEGSRLLVAG+AL HDER +R AET MTP +EFDRV G+ WE Q+KGKKS RP AP G EDNGHGA NI + VP GGG R PVGE+RNRLLVA EALVH+ERPERTNA+KLMTPPDGFDS+WQK+WLRQTARRS RDRRRVSP QGK V EGRETERQARG+HFVWS ASENGERPREATRDG EEE ATG N VRD AIE
Sbjct: 119 GETCEDYGSSPYSGMVNFDNLLWSLLTLFTVTTLEGWHEVMMFTQRVMSEYTIWFFVFLIVTATWAIMSLMIAAMLARFKAVSLAEGLRLMRERAE------VEARGRAKKGKRMLGSAAEGVKGVVTKGGAEIGGAIARGXXXXXXXXXDILAAGPNLAAGLITSHAE-------------------------------------------AIHWAILLNVVVIGMGGHNIGDKKAAVLHDMETALTIIFTVEVVLKNVVLGARR-------------WNRFDFFVSMSSLLHLIMTTLVDDLVVTV--------------------------VGVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQ-------------------------------------SVLLNLVLAVVLEGASDHMKEKHAAQQFRDNTLRLFHNQYKRLAMRRWSAKTRAEAMLERGQVLVLPGNRAEKLGLEDFPKPTPYRPGRPSXXXXXXXXXXXAVVDVAGFPASDTSASPRNGGLVLSRQEGHALRAPPPPSVRSSSLSLRHPLPPTPSSCLLPLPQSHHQTDVGASAQAPLQEAATAAHAAAAQEGAADI-SGTRHGVSDGDQSDDNRLVRRDTSSPKAEADRHVTSPDQFXXXXXXXXXXXRVWDTGWQRERRKKSPRGRTGCEPRRQGKSVRRGQEKGMSAGREDSAAHSAASVSEGRPLSATSEEAMEDGRRLEPTATEELVTPPEEVDKVWGKSWQRQYKGKKSTGRRPSVPSSVEEDDGHGAQST----NAAGEKVVGSPVDEEGSRLLVAGEALEHDERRKRKSAETLMTPQDEFDRVWGRRWESQYKGKKSIGRRPGAPPSGAEDNGHGAQNIEQEVPIEGGGVGRPPVGEERNRLLVAGEALVHDERPERTNAEKLMTPPDGFDSTWQKNWLRQTARRSYRDRRRVSPSSQGKRVLEGRETERQARGEHFVWSPASENGERPREATRDGREEEGATGCENNVRDGAIE 1029
BLAST of mRNA_Ecto-sp13_S_contig5813.16274.1 vs. uniprot
Match: A0A4W6BUJ1_LATCA (Calcium voltage-gated channel subunit alpha1 H n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6BUJ1_LATCA) HSP 1 Score: 110 bits (276), Expect = 7.270e-21 Identity = 113/456 (24.78%), Postives = 192/456 (42.11%), Query Frame = 1
Query: 10 CEDYGSSPYSGMVNFDNLLWSLLTLFTVTTLEGWHEVMMFTQRVMSEYTIWFFVFLIVTATWAIMSLMIAAMLARFKAVSLAEGLRLMRERAEARAARQVEARGRAKKGKRMLGSAAEGVKGVVTKGGAEVGGAIARGXXXXXXXXXDILAAGPNLAAGLITLH-AESK-------PEGKTARVVRQSTGLWQSIIWYARHPLVEDQVLS---EDSLFSQAIHWAIILNVVVIGMGGHNIGDKKAAVLHDMETVLTIIFTVEVVLKNVVLGSGRYFKSRRVEEEVH*WNWFDFFVSMSSLLHLIVTTLVDDLAVTASLRLLNXXXXXXXXXXXXXXXXXXXXXXVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQVFTVIAGDSWNTIMYRTMENTTAVSALFFVALIVLGESVLLNLVLAVVLE 1344
C +P G +NFDN+ ++L+ +F V TLEGW E+M + S +++ FFV + + ++ +M++ + +F L RE G + GAI + IL + L H E++ P A + S L S I+ + + + L+ + LF + I +A+ L+++ I + H + +L + T IF VE+ LK + L YF+ R N FDF + + SL +I L+V + RLL V+ ++ + + L+L + FVF+V+GM LFG T ++ H A + FD+ WS V VF ++ + WN ++Y M TT +A +FV +IVLG+ V+LN+++ +V+E
Sbjct: 277 CRAGDQNPDMGAINFDNIGYALIAIFQVVTLEGWREIMFYVMDAHSFWSLVFFVLVTIMGSFIMMNVCAVVIATQFSE-------NLGRET------------------------------------GKQPAGAITQLCNKLTSWLWRILQRYKRSDSVLAYCHHGETRQNFSAVPPPAAAAATIALSLSLTDSCIFQGQAWMSFKRKLATIVKSKLFDRVIMFAVFLSILTIAVEHHKQPVELTRMLQISNIIFTFIFVVEMALKQLALAWA-YFRDRN--------NIFDFIIVIISLWEIIAKA-DGRLSVLRAFRLLRFVRLVHFLPYLKRQLL------VLKRTMEEAGSLCMLLLFVIFVFSVMGMHLFGCTFSFQAQK--GHEIADRMNFDSILWSMVTVFQILTQEDWNLVLYNAMAATTPWAAFYFVTVIVLGKHVILNVLVGIVVE 671
BLAST of mRNA_Ecto-sp13_S_contig5813.16274.1 vs. uniprot
Match: A0A078AKM0_STYLE (Voltage-gated ion channel superfamily n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AKM0_STYLE) HSP 1 Score: 102 bits (253), Expect = 4.080e-18 Identity = 74/268 (27.61%), Postives = 134/268 (50.00%), Query Frame = 1
Query: 610 LSEDSLFSQAIHWAIILNVVVIGMGGHNIGDKKAAVLHDMETVLTIIFTVEVVLKNVVLGSGRYFKSRRVEEEVH*WNWFDFFVSMSSLLHLIVTTLVDDL---AVTASLRLLNXXXXXXXXXXXXXXXXXXXXXXVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFA---AHSYAHKTRFDTFFWSFVQVFTVIAGDSWNTIMYRTMENT-TAVSALFFVALIVLGESVLLNLVLAVVLEGASDQMKEKHAAQQFR 1392
L + S F+Q I I+LN + + + + I ++++ +L ++ +++F +E+++K + G YF+ +N FD V +SSL+ L V+ LVD A+TA L + ++ +D+ L+ L F++++LGM++F + ++ AH + FD F SF VF ++ D W+ I Y T AVS +FF++LI++G+ VLLNL LA++LE +Q ++ +Q+R
Sbjct: 25 LVKSSYFTQFISILIVLNTIDLALDRYPIDEEQSLILDEINMAFSMVFMIEMIIKLLAFGFKAYFRDP--------FNVFDCVVVISSLIDLFVSFLVDSSSGGAITA----LRGFRLIRIFKLAKAWKKFQNLLKTIGRTFKDISTFSILLFLFMFIYSLLGMEIFAYKVKVLPDQITLDDAHGSSPLANFDDFISSFTTVFIILTNDGWSAIYYNYYRATGPAVSTIFFISLIIIGQKVLLNLFLAILLENFDEQSLDQEIKEQYR 280
BLAST of mRNA_Ecto-sp13_S_contig5813.16274.1 vs. uniprot
Match: UPI00188957A7 (voltage-dependent T-type calcium channel subunit alpha-1H-like n=1 Tax=Pungitius pungitius TaxID=134920 RepID=UPI00188957A7) HSP 1 Score: 101 bits (252), Expect = 4.890e-18 Identity = 84/274 (30.66%), Postives = 142/274 (51.82%), Query Frame = 1
Query: 571 IWYARHPLVEDQVLSEDSLFSQAIHWAIILNVVVIGMGGHNIGDKKAAVLHDMETVLTIIFTVEVVLKNVVLG-SGRYFKSRRVEEEVH*WNWFDFFVSMSSLLHLIVTTLVDD-LAVTASLRLLNXXXXXXXXXXXXXXXXXXXXXXVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQVFTVIAGDSWNTIMYRTMENTTAVSALFFVALIVLGESVLLNLVLAVVLEGASDQ--MKEKHAA 1380
IW +E + S+ +F++ I A++L+++ + + H+ ++ +L + T+IF E++LK V+G + YF+ R N FDF + + SL TT D L+V + RLL V+ K+ +D + LML + F+F++LGM LFG D L+E + FDT WS V VF ++ G+ WN ++Y TM T+ + ++FVA+IV G+ VLLN+++ +VL+G D+ ++E HA+
Sbjct: 372 IWRQLTTRLEKVIKSK--IFNRLIMSAVVLSILTLAIEHHDQPNELTNMLQISDIAFTVIFVAEMLLK--VMGLNWAYFQDRN--------NLFDFVIVIISLWK--TTTKADGRLSVLRAFRLLRFGRLLHYLPYLRTQLL------VLKKAMQDAASLCMLMLFVIFIFSLLGMHLFGHRSDT-LKEIK-----DRKHFDTLLWSMVTVFQILTGEDWNRVLYTTMAATSPWAFIYFVAVIVTGKHVLLNILVGIVLQGFQDRRTLREDHAS 619
BLAST of mRNA_Ecto-sp13_S_contig5813.16274.1 vs. uniprot
Match: A0A7S3Y5V6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5V6_HETAK) HSP 1 Score: 96.7 bits (239), Expect = 9.000e-18 Identity = 85/245 (34.69%), Postives = 119/245 (48.57%), Query Frame = 1
Query: 583 RHPLVEDQVLSEDSLFSQAIHWAIILNVVVIGMGGHNIGDKKAAVLHDMETVLTIIFTVEVVLKNVVLGSGRYFKSRRVEEEVH*WNWFDFFVSMSSLLHLIVTTLVDDLAVTASLRLLNXXXXXXXXXXXXXXXXXXXXXXVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQVFTVIAGDSWNTIMYRTMENTTAVSALFFVALIVLGESVLL 1317
R V+ V + S S+ I I LN++ + M GHN D L+ VL IF E+V+K VV G YFK N D + ++SL+ V L + R XXXXXXX +++ S R + PV+ L LLM F+F+VLGMQLFGA LD A Y RFD F W+++ VF + GD+W +M +E +V +++FV +I+LG LL
Sbjct: 108 RSKKVKGLVDKDSSWLSRFIFGCIALNIIFLAMDGHNNPDWLIKFLYYSNIVLIGIFAAEMVIKLVVDGVLGYFKQIS--------NALDAAIVIASLVEFAVNALGSLTGLRVLTRXXXXXXXXXXSKLANRWPHLLQVLRILVSSFRGVGPVLCLALLMMFIFSVLGMQLFGARLDGSGSSEAELRY----RFDDFSWAYMSVFYIYVGDNWPDVMQLAVEQYGSVCSIYFVLVILLGNWFLL 340
BLAST of mRNA_Ecto-sp13_S_contig5813.16274.1 vs. uniprot
Match: UPI001A987489 (voltage-dependent T-type calcium channel subunit alpha-1H-like n=1 Tax=Xiphias gladius TaxID=8245 RepID=UPI001A987489) HSP 1 Score: 99.8 bits (247), Expect = 1.860e-17 Identity = 82/277 (29.60%), Postives = 133/277 (48.01%), Query Frame = 1
Query: 571 IWYARHPLVEDQVLSEDSLFSQAIHWAIILNVVVIGMGGHNIGDKKAAVLHDMETVLTIIFTVEVVLKNVVLGSGRYFKSRRVEEEVH*WNWFDFFVSMSSLLHLIVTTLVDDLAVTASLRLLNXXXXXXXXXXXXXXXXXXXXXXVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQVFTVIAGDSWNTIMYRTMENTTAVSALFFVALIVLGESVLLNLVLAVVLEGASDQMKEKHAAQQFRDNT 1401
+W +E V S+ LF I +A+ L+++ I + + + A +L + IFTVE+ LK + L YF+ R N FDF + + SL +I T L+V +LRLL V+ K+ + P+ LML + +F+VLGM LFG H + FD+ WS V VF ++ + WN ++Y M T+ +AL+FVA+IVLG+ VLLN+++ +V+E + +H++ +D+T
Sbjct: 281 VWMPFKGKLERMVNSK--LFDWVIMFAVFLSILTIAIEHYEQPKELAQMLQISNVIFAFIFTVEMALKLLAL-EWEYFRDRN--------NIFDFVIVIISLWEIIAKT-DGRLSVLRALRLLRFVRLVHFLPCLKRQLL------VLNKTMEEAAPLCRLMLFVTLIFSVLGMCLFGGKFS--FMTLNGHKIDDRKNFDSLLWSMVTVFQILTEEDWNLVLYNAMAATSPWAALYFVAIIVLGKHVLLNVLVGIVIES----FQARHSSSSDKDST 533
BLAST of mRNA_Ecto-sp13_S_contig5813.16274.1 vs. uniprot
Match: A0A0S7GN71_9TELE (CAC1H (Fragment) n=3 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7GN71_9TELE) HSP 1 Score: 97.1 bits (240), Expect = 6.040e-17 Identity = 74/266 (27.82%), Postives = 133/266 (50.00%), Query Frame = 1
Query: 550 TGLWQSIIWYARHPLVEDQVLSEDSLFSQAIHWAIILNVVVIGMGGHNIGDKKAAVLHDMETVLTIIFTVEVVLKNVVLGSGRYFKSRRVEEEVH*WNWFDFFVSMSSLLHLIVTTLVDDLAVTASLRLLNXXXXXXXXXXXXXXXXXXXXXXVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQVFTVIAGDSWNTIMYRTMENTTAVSALFFVALIVLGESVLLNLVLAVVLEG 1347
T +W+ R+ L +++ FS+ I AI++N + +G+ H + +L V T +F++E++LK + LG Y K+ +N FD + + S+ IV L+V + RLL V++K+ ++ L++L F+F++LGM LFG GL + + + A + FD+ W+ V VF ++ + WN ++Y M +T+ ++AL+FVAL+ G VL NL++A+++EG
Sbjct: 137 TSIWKCCWLRLRNKL---ELIVSSRYFSRGIMIAILINTLSMGIEYHEQPQELTDILEISNMVFTSLFSLEMLLKMLALGLFGYIKNP--------YNSFDSIIVIISVWE-IVGEAEGGLSVLRTFRLLRVLKLVRFLPALRRQLV------VLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKF--GLCQESGETLADRKNFDSLLWATVTVFQILTQEDWNAVLYNGMASTSPLAALYFVALMTFGNYVLFNLLVAILVEG 382
BLAST of mRNA_Ecto-sp13_S_contig5813.16274.1 vs. uniprot
Match: A0A4W6CCF6_LATCA (Calcium voltage-gated channel subunit alpha1 H n=5 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6CCF6_LATCA) HSP 1 Score: 97.4 bits (241), Expect = 9.660e-17 Identity = 76/267 (28.46%), Postives = 129/267 (48.31%), Query Frame = 1
Query: 616 EDSLFSQAIHWAIILNVVVIGMGGHNIGDKKAAVLHDMETVLTIIFTVEVVLKNVVLGSGRYFKSRRVEEEVH*WNWFDFFVSMSSLLHLIVTTLVDDLAVTASLRLLNXXXXXXXXXXXXXXXXXXXXXXVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQVFTVIAGDSWNTIMYRTMENTTAVSALFFVALIVLGESVLLNLVLAVVLEGASDQMKEKHAAQQFRDNTLRLFH 1416
+ LF + I +A+ L+++ I + H +L T IF VE+VLK + L G YF+ R N FDF + + SL +I L+V + RLL V+ ++ + + L+L + F+F+V+GM LFG T +++ H+ + FD+ WS V VF ++ + WN ++Y M T+ +A +FVA+IVLG+ V+LN+++ +V+E S Q + + + TL L +
Sbjct: 359 KSKLFDRVIMFAVFLSILTIAIEHHGQPIALTRMLQISNITFTFIFVVEMVLKLMALSWG-YFRDRN--------NIFDFVIVIISLWEIIAKA-DGRLSVLRAFRLLRFVRLVHFLPYLKRQLL------VLKRTMEEAGSLCVLLLFVTFIFSVMGMHLFGCTFSFKMQK--GHNVDDRKNFDSLLWSMVTVFQILTQEDWNLVLYNAMAATSPWAAFYFVAVIVLGKHVILNVLVGIVVE--SFQARVRMLVLNYTPTTLNLVY 605
BLAST of mRNA_Ecto-sp13_S_contig5813.16274.1 vs. uniprot
Match: UPI0008747D5E (voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1 n=5 Tax=Lates calcarifer TaxID=8187 RepID=UPI0008747D5E) HSP 1 Score: 97.4 bits (241), Expect = 1.010e-16 Identity = 71/243 (29.22%), Postives = 118/243 (48.56%), Query Frame = 1
Query: 616 EDSLFSQAIHWAIILNVVVIGMGGHNIGDKKAAVLHDMETVLTIIFTVEVVLKNVVLGSGRYFKSRRVEEEVH*WNWFDFFVSMSSLLHLIVTTLVDDLAVTASLRLLNXXXXXXXXXXXXXXXXXXXXXXVVIKSARDLWPVVALMLLMCFVFTVLGMQLFGATLDPGLEEFAAHSYAHKTRFDTFFWSFVQVFTVIAGDSWNTIMYRTMENTTAVSALFFVALIVLGESVLLNLVLAVVLE 1344
+ LF + I +A+ L+++ I + H + +L + T IF VE+ LK + L YF+ R N FDF + + SL +I L+V + RLL V+ ++ + + L+L + FVF+V+GM LFG T ++ H A + FD+ WS V VF ++ + WN ++Y M TT +A +FV +IVLG+ V+LN+++ +V+E
Sbjct: 476 KSKLFDRVIMFAVFLSILTIAVEHHKQPVELTRMLQISNIIFTFIFVVEMALKQLALAWA-YFRDRN--------NIFDFIIVIISLWEIIAKA-DGRLSVLRAFRLLRFVRLVHFLPYLKRQLL------VLKRTMEEAGSLCMLLLFVIFVFSVMGMHLFGCTFSFQAQK--GHEIADRMNFDSILWSMVTVFQILTQEDWNLVLYNAMAATTPWAAFYFVTVIVLGKHVILNVLVGIVVE 700 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5813.16274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5813.16274.1 >prot_Ecto-sp13_S_contig5813.16274.1 ID=prot_Ecto-sp13_S_contig5813.16274.1|Name=mRNA_Ecto-sp13_S_contig5813.16274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=748bp MSSLLHLIVTTLVDDLAVTASLRLLNVLRVFRILRMRRLKRTVVTVVGVVback to top mRNA from alignment at Ecto-sp13_S_contig5813:99..8800+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5813.16274.1 ID=mRNA_Ecto-sp13_S_contig5813.16274.1|Name=mRNA_Ecto-sp13_S_contig5813.16274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8702bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5813:99..8800+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5813:99..8800+ >mRNA_Ecto-sp13_S_contig5813.16274.1 ID=mRNA_Ecto-sp13_S_contig5813.16274.1|Name=mRNA_Ecto-sp13_S_contig5813.16274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2244bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5813:99..8800+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |