prot_Ecto-sp13_S_contig5801.16252.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig5801.16252.1
Unique Name	prot_Ecto-sp13_S_contig5801.16252.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	908

Homology

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BLAST of mRNA_Ecto-sp13_S_contig5801.16252.1 vs. uniprot
Match: A0A6H5KU24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU24_9PHAE)

HSP 1 Score: 1368 bits (3540), Expect = 0.000e+0
Identity = 812/903 (89.92%), Postives = 826/903 (91.47%), Query Frame = 0

Query:    1 VRPHRDPWIGWVYRVGGLAILLTNLTGLAQKTGAAHTGSPWVVVSAGIFISLVLALAICLCGGWRLSCAEQGSSAAAAAAIIPRRDSRSAFPSVVGPSVGGDHHEGDLGSSSTRGRQRAPPLRHAGPDSVSRSGGXXXXXXX--DTESASVPGRDVSVTAAVRSESSAVPDSCRSQVTRRLPSLQELVRYSRSDSSSGAGGAGASSAGMKLDRQPSDSSICVVNPMFEDGSGEDRVPSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRSGQFQRYLLSKSPIRSETGPGFSRSSSRGERGGSGGPGTSRVFDTFGGSGSASMRSSIDAHLTAAGGRFYSNTDGGGIPVPMAASSEAGSQEGRKWSGSSSSRQLHGDGDDRLSSFSAGDRGTADRRQGDHASAPCRVETAVTSSTVAAXXXXXXXXXXXXXXXXXXXXNKHPSAMSRARAPPRAPVLAPGAPTIDGHIRRFGAPTMEQSPSSFASTSFESGASETSRRRRRSDQARVLASWRNSTGSTGFSGSRSRRTMSRVSSSGGVTPTNQQTPAPVGNRARGKMFRRKSSEALNGGVSFVSLQSNSSATSGGGGKGGPAELRRLRPEHSRSYSSGQIDLKMLQGFGDFPAATEGPDGQKPIVGDSRTLGTNWVGQNARGGWPLDLPASSAMPRWWIEHASRSGGDSSHGLGXXXXXXXXXX-APPDLVLAAQERAKAAEREAAAARVEAMFGDENHLNERRFSNADGGSNIDDFRAFVRARASGTSSFDSRCPLEDGRDDASVGDXXXXXXXXXXXXNGTYWDTGDDAASAFSQDQSDNGSGAGAGGRYGKKRGGGGRKLPSAIGSRSSSVGGAETPLTSAELKRYLNFDFEDEDGSLAGDPVSFIRVSERVNNINAKVWGRGSLQR 900
            VRPHRDPWIGWVYR GGLAILL NLTGLAQKTGAA TGSP VVVSAGIFISL+LALA+CLCGGWRLSCAEQGSSAAAAAAIIPRRDSR AFPSVVGPSVGGDHH+G LGSSSTRGRQ+APPLRHAGPDSVSRSG XXXXXXX  DTESASVPGRD+ VTAA RSESSAVPDS R QVTRRLPSLQELVRYSRSDSS        SSAGMKLDRQPSDSSICVVNPMFEDGSGEDRVPSE A XXXXXXXXXXXXXXXXXXXXX       DR GQFQRYLLSKSP  S TGPGFSR+SSRGERGGSGGPGTSRVFDT GGSGSASMRSSIDAHLTAAGGRFYSNTDGGGIPVPMAASSEA SQ GRKWSGSSSSRQLHGDG+D LSSFSAGDRGTADRRQG HASAPCRVET VTSSTVAAXXXXXXXXXXXXXXXXXXXXNKHPSAMSRARAPPRAPVLAPGAPTIDGHIRRFGAPTMEQSPSSFASTSFES ASETS RRRRSDQARVLASWRNSTGSTGFSGSRSRRTMSRVSSSGGVTPTNQQTPAPVGNR + KMFRRKSSEALNGGVSFVSLQSNSSATSGGGGKGG AEL+RL PEHSRSY SGQIDLKMLQGFGDFPAATEGPDGQKPIVGDSRTLGTNWVGQNARGGWPLDLPA SAMPRWWIEHASRSGGDSSHG G           APPDLVLAAQERAKAAEREAAAARVEAMFGDENHLNERRFSNADGGSNIDDFRAFVRARASGTSSFDSRC  E GRD++SV D       XXXXXNG+YWDTGDDAASAFS DQSDNGSG G   RYGK RGGGGRKLPSAIGSRSSSVGGAETPLTSAELKRYLNFDFEDEDGSLAGDPVSFIRVSERVN+INAKVWGRGS+QR
Sbjct:  521 VRPHRDPWIGWVYRGGGLAILLANLTGLAQKTGAADTGSPLVVVSAGIFISLMLALAVCLCGGWRLSCAEQGSSAAAAAAIIPRRDSRPAFPSVVGPSVGGDHHDGGLGSSSTRGRQKAPPLRHAGPDSVSRSGXXXXXXXXXXDTESASVPGRDIFVTAAARSESSAVPDSGRGQVTRRLPSLQELVRYSRSDSSXXXXXXXXSSAGMKLDRQPSDSSICVVNPMFEDGSGEDRVPSETAAXXXXXXXXXXXXXXXXXXXXXQ------DRLGQFQRYLLSKSPRTSGTGPGFSRNSSRGERGGSGGPGTSRVFDTCGGSGSASMRSSIDAHLTAAGGRFYSNTDGGGIPVPMAASSEARSQVGRKWSGSSSSRQLHGDGNDGLSSFSAGDRGTADRRQGQHASAPCRVETVVTSSTVAAXXXXXXXXXXXXXXXXXXXXNKHPSAMSRARAPPRAPVLAPGAPTIDGHIRRFGAPTMEQSPSSFASTSFESRASETSWRRRRSDQARVLASWRNSTGSTGFSGSRSRRTMSRVSSSGGVTPTNQQTPAPVGNRGQEKMFRRKSSEALNGGVSFVSLQSNSSATSGGGGKGGSAELQRLWPEHSRSYPSGQIDLKMLQGFGDFPAATEGPDGQKPIVGDSRTLGTNWVGQNARGGWPLDLPAGSAMPRWWIEHASRSGGDSSHGPGGGGEGSDFAAGAPPDLVLAAQERAKAAEREAAAARVEAMFGDENHLNERRFSNADGGSNIDDFRAFVRARASGTSSFDSRCSPEGGRDESSVEDEASDGGSXXXXXNGSYWDTGDDAASAFSLDQSDNGSGGGL--RYGKMRGGGGRKLPSAIGSRSSSVGGAETPLTSAELKRYLNFDFEDEDGSLAGDPVSFIRVSERVNSINAKVWGRGSMQR 1415

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BLAST of mRNA_Ecto-sp13_S_contig5801.16252.1 vs. uniprot
Match: D7FRU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU6_ECTSI)

HSP 1 Score: 787 bits (2033), Expect = 2.440e-260
Identity = 523/896 (58.37%), Postives = 534/896 (59.60%), Query Frame = 0

Query:    1 VRPHRDPWIGWVYRVGGLAILLTNLTGLAQKTGAAHTGSPWVVVSAGIFISLVLALAICLCGGWRLSCAEQGSSAAAAAAIIPRRDSRSAFPSVVGPSVGGDHHEGDLGSSSTRGRQRAPPLRHAGPDSVSRSGGXXXXXXXDTESASVPGRDVSVTAAVRSESSAVPDSCRSQVTRRLPSLQELVRYSRSDSSSGAGGAGASSAGMKLDRQPSDSSICVVNPMFEDGSGEDRVPSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRSGQFQRYLLSKSPIRSETGPGFSRSSSRGERGGSGGPGTSRVFDTFGGSGSASMRSSIDAHLTAAGGRFYSNTDGGGIPVPMAASSEAGSQEGRKWSGSSSSRQLHGDGDDRLSSFSAGDRGTADRRQGDHASAPCRVETAVTSSTVAAXXXXXXXXXXXXXXXXXXXXNKHPSAMSRARAPPRAPVLAPGAPTIDGHIRRFGAPTMEQSPSSFASTSFESGASETSRRRRRSDQARVLASWRNSTGSTGFSGSRSRRTMSRVSSSGG-VTPTNQQTPAPVGNRARGKMFRRKSSEALNGGVSFVSLQSNSSATSGGGGKGGPAELRRLRPEHSRSYSSGQIDLKMLQGFGDFPAATEGPDGQKPIVGDSRTLGTNWVGQNARGGWPLDLPASSAMPRWWIEHASRSGGDSSHGLGXXXXXXXXXXA---PPDLVLAAQERAKAAEREAAAARVEAMFGDENHLNERRFSNADGGSNIDDFRAFVRARASGTSSFDSRCPLEDGRDDASVGDXXXXXXXXXXXXNGTYWDTGDDAASAFSQDQSDNGSGAGAGGRYGKKRGGGGRKLPSAIGSRSSSVGG-AETPLTSAELKRYLNFDFEDEDGSLAGDPVSFIRVSERVNNINAK 891
            VRPHRDPWIGWVYR GG AILL NLTGLAQK GAA TGSPWVVVSAGIFISLVLALA+CLCGGWRLSCAEQGSSAAAAAAIIPRRDSRSAFPSVVGPSVGGDHH+GDLGSSSTRGRQ+APPLRHAGPDSVSRSG          +SASVPGRDV V AAVRSESSAVPDS R Q                                                                                                                                                                                                                                                                                                                 SPSSFASTSFESGASETSR RRRSDQARVLASWRNSTGSTGFSGSRSRRTMSRVSSSGG VTPT+QQTPAPVGNR RGKMFRRKSSEALNGGVSF+SLQSNSSATSGGGGKGGP ELRRLR E SRSYSSGQIDLKMLQG G+FPAATEGPDGQKPIVGDSRTLGTNWVGQNARGGWPLDLPASSAMPRWWIEHASRSGGDSSH LG  XXXXXXXXA   PPDLVLAAQERAKAAEREAAAARVEAMFGDENHLNERRFSNADGGSNIDDFRAFVRARASGTSSFDSRCP E GRD+ASVGDXXXXXXXXXXXXNG YWDTGDDA S FSQDQSDN                  RKLPSAIGSRSS VGG AETPLTSAELK+YLNFDFED+DGSLAGDPVSFIRVSERVN+INAK
Sbjct: 1199 VRPHRDPWIGWVYRGGGFAILLANLTGLAQKIGAADTGSPWVVVSAGIFISLVLALAVCLCGGWRLSCAEQGSSAAAAAAIIPRRDSRSAFPSVVGPSVGGDHHDGDLGSSSTRGRQKAPPLRHAGPDSVSRSGDGDGDCGGGPDSASVPGRDVFVAAAVRSESSAVPDSGRGQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPSSFASTSFESGASETSRSRRRSDQARVLASWRNSTGSTGFSGSRSRRTMSRVSSSGGGVTPTDQQTPAPVGNRGRGKMFRRKSSEALNGGVSFLSLQSNSSATSGGGGKGGPTELRRLRSERSRSYSSGQIDLKMLQGLGNFPAATEGPDGQKPIVGDSRTLGTNWVGQNARGGWPLDLPASSAMPRWWIEHASRSGGDSSHSLGVGXXXXXXXXAAGAPPDLVLAAQERAKAAEREAAAARVEAMFGDENHLNERRFSNADGGSNIDDFRAFVRARASGTSSFDSRCPPEGGRDEASVGDXXXXXXXXXXXXNGAYWDTGDDAGSTFSQDQSDNXXXXXXXXXXXXXXXXX-RKLPSAIGSRSSPVGGGAETPLTSAELKQYLNFDFEDDDGSLAGDPVSFIRVSERVNSINAK 1788

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig5801.16252.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig5801.16252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KU24_9PHAE	0.000e+0	89.92	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FRU6_ECTSI	2.440e-260	58.37	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 701..721
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 67..907
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 41..66
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 30..40
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 42..64
None	No IPR available	TMHMM	TMhelix		coord: 10..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig5801	contig	Ecto-sp13_S_contig5801:4560..8828 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig5801.16252.1	mRNA_Ecto-sp13_S_contig5801.16252.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig5801 4560..8828 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig5801.16252.1 ID=prot_Ecto-sp13_S_contig5801.16252.1|Name=mRNA_Ecto-sp13_S_contig5801.16252.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=908bp
VRPHRDPWIGWVYRVGGLAILLTNLTGLAQKTGAAHTGSPWVVVSAGIFI
SLVLALAICLCGGWRLSCAEQGSSAAAAAAIIPRRDSRSAFPSVVGPSVG
GDHHEGDLGSSSTRGRQRAPPLRHAGPDSVSRSGGGGGDGGGDTESASVP
GRDVSVTAAVRSESSAVPDSCRSQVTRRLPSLQELVRYSRSDSSSGAGGA
GASSAGMKLDRQPSDSSICVVNPMFEDGSGEDRVPSEAAAAAVVPPRATR
GGRRQQQQQQQQQQQQQQDRSGQFQRYLLSKSPIRSETGPGFSRSSSRGE
RGGSGGPGTSRVFDTFGGSGSASMRSSIDAHLTAAGGRFYSNTDGGGIPV
PMAASSEAGSQEGRKWSGSSSSRQLHGDGDDRLSSFSAGDRGTADRRQGD
HASAPCRVETAVTSSTVAAAAAAAAAAAEAEAVAAAADANKHPSAMSRAR
APPRAPVLAPGAPTIDGHIRRFGAPTMEQSPSSFASTSFESGASETSRRR
RRSDQARVLASWRNSTGSTGFSGSRSRRTMSRVSSSGGVTPTNQQTPAPV
GNRARGKMFRRKSSEALNGGVSFVSLQSNSSATSGGGGKGGPAELRRLRP
EHSRSYSSGQIDLKMLQGFGDFPAATEGPDGQKPIVGDSRTLGTNWVGQN
ARGGWPLDLPASSAMPRWWIEHASRSGGDSSHGLGGGGGSDFAAGAPPDL
VLAAQERAKAAEREAAAARVEAMFGDENHLNERRFSNADGGSNIDDFRAF
VRARASGTSSFDSRCPLEDGRDDASVGDEASDGGSASTGGNGTYWDTGDD
AASAFSQDQSDNGSGAGAGGRYGKKRGGGGRKLPSAIGSRSSSVGGAETP
LTSAELKRYLNFDFEDEDGSLAGDPVSFIRVSERVNNINAKVWGRGSLQR
KKQEKNN*