prot_Ecto-sp13_S_contig5791.16231.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5791.16231.1
Unique Nameprot_Ecto-sp13_S_contig5791.16231.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length64
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5791.16231.1 vs. uniprot
Match: A0A6H5KZU3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZU3_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.110e-7
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0 
Query:   39 QQQHLHQHPSGWTKSFKNVFNKSSGR 64
            QQQHLHQHPSGWTKSFKNVF KSSGR
Sbjct:  175 QQQHLHQHPSGWTKSFKNVFTKSSGR 200
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BLAST of mRNA_Ecto-sp13_S_contig5791.16231.1 vs. uniprot
Match: D7FU55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU55_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 7.110e-6
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0 
Query:   39 QQQHLHQHPSGWTKSFKNVFNKSSGR 64
            QQQHLHQ+P GWTKSFKNVF KSSGR
Sbjct:   45 QQQHLHQYPPGWTKSFKNVFTKSSGR 70
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5791.16231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZU3_9PHAE2.110e-796.15Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FU55_ECTSI7.110e-688.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5791contigEcto-sp13_S_contig5791:5573..6495 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5791.16231.1mRNA_Ecto-sp13_S_contig5791.16231.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5791 5573..6496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5791.16231.1 ID=prot_Ecto-sp13_S_contig5791.16231.1|Name=mRNA_Ecto-sp13_S_contig5791.16231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
GGRGVLRYGACRYQGAREHAEHRRGPISLESSSRTRGPQQQHLHQHPSGW
TKSFKNVFNKSSGR
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