prot_Ecto-sp13_S_contig578.16213.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig578.16213.1
Unique Nameprot_Ecto-sp13_S_contig578.16213.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length206
Homology
BLAST of mRNA_Ecto-sp13_S_contig578.16213.1 vs. uniprot
Match: A0A6H5KEX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEX8_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 6.330e-121
Identity = 189/203 (93.10%), Postives = 193/203 (95.07%), Query Frame = 0
Query:    1 MLGSRLAFASAAVKWSHLPVSTPPPSTRRLLTMRAGPDVVCLDCTGTIMRIKGSMPRLYLGVLEDRLGVSEGGLPDKVSEQDLLDSFRASLKRRSKELPCFGTGVMSSEDWWAEVVMATFRGAGVSDETLGISREGGRGXXXXXXXXXXXXXXXVFDDVFDRLFHDVFTSTTAWELVPGAEKVLEDLRAWVGEDGGPRALGAV 203
            MLGSRLA AS+AVKWSHLPV TPPPSTRRLLTMRAGPDVVCLDCTGTIMRIKGSMPRLYLGVLEDRLGVSEGGLPDKVSEQDLL+SFRASLKRRSKELPCFGTGVMSSEDWWAEVVMATFRGAGVSDETLGIS+EG RG  XXXXXXXXX    VFDDVFDRLFHDVFTSTTAWELVPGAE+VLEDLRAWVGE GGPRALGAV
Sbjct:    1 MLGSRLASASSAVKWSHLPVITPPPSTRRLLTMRAGPDVVCLDCTGTIMRIKGSMPRLYLGVLEDRLGVSEGGLPDKVSEQDLLNSFRASLKRRSKELPCFGTGVMSSEDWWAEVVMATFRGAGVSDETLGISQEGDRGGGXXXXXXXXXGR--VFDDVFDRLFHDVFTSTTAWELVPGAEEVLEDLRAWVGEAGGPRALGAV 201          
BLAST of mRNA_Ecto-sp13_S_contig578.16213.1 vs. uniprot
Match: A0A7R9U3B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3B9_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 9.130e-8
Identity = 51/184 (27.72%), Postives = 82/184 (44.57%), Query Frame = 0
Query:   32 TMRAGPDVVCLDCTGTIMRIKGSMPRLYLGVLEDRLGVSEGGLPDKVSEQDLLDSFRASLKRRSKELPCFGTGV-MSSEDWWAEVVMAT----FRGAGVSDETLGISREGGRGXXXXXXXXXXXXXXXVFDDVFDRLFHDVFTSTTA-------WELVPGAEKVLEDLRAWVGEDGGPRALGAV 203
            T +  P ++  D TGT+M+++  +  +Y   L +         PD  S      +F+ +   + K +PCFG G  ++S DWW  V+  T    F   GV+DE   ++  GG                   ++V + LF D++ +  A       WEL PG E VL++LR+   E  G   LG +
Sbjct:  273 TAKPRPKLITFDATGTLMQLRSHIGVIYRDTLLEHATTLRLPRPDVFSI-----AFKEAYASQCKAMPCFGCGSGIASFDWWRPVMQGTYDSVFSSFGVTDEE--VAEAGGMESK---------------EEVMEMLFQDLYFNIFAKGPPEGMWELRPGVEAVLQNLRS--AESCGGLRLGVL 432          
BLAST of mRNA_Ecto-sp13_S_contig578.16213.1 vs. uniprot
Match: UPI001EE526F1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE526F1)

HSP 1 Score: 57.4 bits (137), Expect = 2.040e-6
Identity = 46/158 (29.11%), Postives = 76/158 (48.10%), Query Frame = 0
Query:   39 VVCLDCTGTIMRIKGSMPRLYLGVLEDRLGVSEGGLPDKVSEQDLLDSFRASLKRRSKELPCFGTGV-MSSEDWWAEVVMATFRG---AGVSDETLGISREGGRGXXXXXXXXXXXXXXXVFDDVFDRLFHDV---FTSTTAWELVPGAEKVLEDLRA 189
            +V LD T T+++I GS    Y  V     G+   G+  KVS  D+  SF+   ++ S+  P FGT V MSS  WW ++V   F+    A V+ + L  + +                     D+   ++ + +   F++  AWE++PGAE +L+ L+A
Sbjct:   20 LVTLDVTNTLLKITGSPGHQYAAVA----GIY--GVKAKVS--DINTSFKYRYRQYSERYPNFGTAVGMSSYKWWTDLVKDCFKSVADANVNSQVLPATNQ---------------------DETLTQIANHLYLHFSTAKAWEILPGAEALLQSLKA 148          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig578.16213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KEX8_9PHAE6.330e-12193.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9U3B9_9STRA9.130e-827.72Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
UPI001EE526F12.040e-629.11haloacid dehalogenase-like hydrolase domain-contai... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.720coord: 53..129
e-value: 5.4E-10
score: 41.2
NoneNo IPR availablePANTHERPTHR46191FAMILY NOT NAMEDcoord: 36..188
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 40..52
e-value: 5.4E-10
score: 41.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig578contigEcto-sp13_S_contig578:19889..23699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig578.16213.1mRNA_Ecto-sp13_S_contig578.16213.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig578 19889..23699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig578.16213.1 ID=prot_Ecto-sp13_S_contig578.16213.1|Name=mRNA_Ecto-sp13_S_contig578.16213.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=206bp
MLGSRLAFASAAVKWSHLPVSTPPPSTRRLLTMRAGPDVVCLDCTGTIMR
IKGSMPRLYLGVLEDRLGVSEGGLPDKVSEQDLLDSFRASLKRRSKELPC
FGTGVMSSEDWWAEVVMATFRGAGVSDETLGISREGGRGGDGGGGGGGGA
RGGRVFDDVFDRLFHDVFTSTTAWELVPGAEKVLEDLRAWVGEDGGPRAL
GAVRM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf