mRNA_Ecto-sp13_S_contig5777.16204.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5777.16204.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE) HSP 1 Score: 738 bits (1904), Expect = 4.590e-255 Identity = 401/441 (90.93%), Postives = 409/441 (92.74%), Query Frame = 1
Query: 229 MLLAKAASLQALGLVFAGWGASAALTLPHPPLSVIRGALLTTAGETFRHQGEFKAAVEWHEARLDDARPAPYLACASPDSDRGGSGATLSHVLGAGAIGGRVVASSAEHGVCVVATATPGQAETVFQGQQAFSSWAAFPSALKLAPGLLEHPHDGRDGGG-DGRLRTTHGERLRRPKDRKGGSAGNGXXXXXXXXXXXXXXXXDSSSY------DNIGGGPSGVTGLTVELAPGVLAATNRRGSGGGGWYASSGELTDEWREELMSESLDVHDKSFWSSGWSTKLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVLLGLGGTEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQVRRAGV 1530
MLLAKAASLQALGL FAG GASAA TLPHPPLSVIRGALLTTAG TFRHQGEFKAAVEWHEARLDDARPAPYLACASPDSDRGGSGATLSHVLGAGAIGGRVV SSAEHGVCVVATATPGQAE++FQGQQ FSSWAAFPSALKLAPGLL+HPHD RDGGG DGRLR THGERLRRPKDRKG XXXXXXXXXXXXXXXX DNIGGGPSGVTGLTVELAPGVLAATNRRGS GGGWYASSGELTDEWREELMS+SLDVHDKSFWSSGWS KLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVL GLGGTEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADEL+VACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSA+LTESPMTDAGLDGTGEVIQ+ G+
Sbjct: 1 MLLAKAASLQALGLAFAGGGASAAPTLPHPPLSVIRGALLTTAGVTFRHQGEFKAAVEWHEARLDDARPAPYLACASPDSDRGGSGATLSHVLGAGAIGGRVVVSSAEHGVCVVATATPGQAESIFQGQQVFSSWAAFPSALKLAPGLLDHPHDDRDGGGGDGRLRMTHGERLRRPKDRKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNIGGGPSGVTGLTVELAPGVLAATNRRGSSGGGWYASSGELTDEWREELMSQSLDVHDKSFWSSGWSAKLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVLRGLGGTEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELKVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSASLTESPMTDAGLDGTGEVIQIVDTGL 441
BLAST of mRNA_Ecto-sp13_S_contig5777.16204.1 vs. uniprot
Match: D7G6L6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L6_ECTSI) HSP 1 Score: 329 bits (843), Expect = 1.400e-106 Identity = 166/177 (93.79%), Postives = 168/177 (94.92%), Query Frame = 1
Query: 1000 MSESLDVHDKSFWSSGWSTKLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVLLGLGGTEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQVRRAGV 1530
MSESLDVH KSFWSSGWS KL DEAAAEGAGDS GGGPGEVLAREWTRAADVL GLGG EGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQ+ G+
Sbjct: 1 MSESLDVHGKSFWSSGWSAKLLDEAAAEGAGDSLGGGPGEVLAREWTRAADVLRGLGGAEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQIVDTGL 177
BLAST of mRNA_Ecto-sp13_S_contig5777.16204.1 vs. uniprot
Match: D8LBZ2_ECTSI (Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ2_ECTSI) HSP 1 Score: 329 bits (843), Expect = 2.500e-102 Identity = 166/177 (93.79%), Postives = 168/177 (94.92%), Query Frame = 1
Query: 1000 MSESLDVHDKSFWSSGWSTKLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVLLGLGGTEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQVRRAGV 1530
MSESLDVH KSFWSSGWS KL DEAAAEGAGDS GGGPGEVLAREWTRAADVL GLGG EGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQ+ G+
Sbjct: 1 MSESLDVHGKSFWSSGWSAKLLDEAAAEGAGDSLGGGPGEVLAREWTRAADVLRGLGGAEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQIVDTGL 177
BLAST of mRNA_Ecto-sp13_S_contig5777.16204.1 vs. uniprot
Match: D8LNG6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG6_ECTSI) HSP 1 Score: 236 bits (603), Expect = 6.880e-65 Identity = 171/435 (39.31%), Postives = 229/435 (52.64%), Query Frame = 1
Query: 268 LVFAGWGASAALTLPHPPLSVIRGALLTTAGETFR-HQGEFKAAVEWHEARLDDARP---APYLACASPDSDRGGSGATLSHVLGAGAIGGRVVASSAEHGVCVVATATPGQAETVFQGQQAFS--SWAAFPSALKLAPGLLEHP--HD-----GRDGGGDGRLRTTHGERLRRPKDRKGGSAGNGXXXXXXXXXXXXXXXXDSSSYDNIGGGPSGVTGLTVELAPGVLAATNRRGSGGGGWYASSGELTDEWREELMSESLDVHDKSFWSSGWSTKLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVLLGLG-GTEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQVRRAGV 1530
LVF A AA L P L ++ ALLTTA + F+ H G F+AA W+ RL ++ AP+LACA S + L L A+ RVV+ S +HG C A+A+ QA + + Q+ F +++ FPS LKLAPGL++H HD R G D RL HG R+R+P V GL+VEL PG LAA + + + + +LMS S+D+H +FWS + +GAG+ G V AR+W +AA V+ L GP GD+CSW+ + V H DD L + G+DHLL GRGAGG+ E+ EL VACFM L+SFLA RPEVLRVSP ++LNAAA +QSA+ T++P+TDAGLDGTGE+IQV +G+
Sbjct: 11 LVFLCSSAVAAGRLNSPALELVENALLTTAKDDFKGHVGAFEAAATWNGERLRHSQEETRAPHLACARYGDGHEAS-SRLKQFLSPEAV--RVVSHSEDHGACFFASASHAQAAAIVEDQEQFGLENFSPFPSPLKLAPGLVDHTESHDEAEEEARSSGLD-RLSARHGARMRKPN----------------------------------------VEGLSVELTPGTLAARS----------SEAKSFINHMLGDLMSASVDLHSTNFWS---------DPGMDGAGEHLSSPAGAVRARDWRKAASVVHELSEAASTGP--GDICSWNRIFVHHAGDDSLLVSGLDHLLFSGRGAGGSHEEESTELHVACFMGLVSFLAGRPEVLRVSPRPTKRVLNAAARGVIQSASATDTPLTDAGLDGTGEIIQVIDSGL 380
BLAST of mRNA_Ecto-sp13_S_contig5777.16204.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE) HSP 1 Score: 222 bits (566), Expect = 9.980e-60 Identity = 162/424 (38.21%), Postives = 215/424 (50.71%), Query Frame = 1
Query: 289 ASAALTLPHPPLSVIRGALLTTAGETFR-HQGEFKAAVEWHEARL---DDARPAPYLACASPDSDRGGSGATLSHVLGAGAIGGRVVASSAEHGVCVVATATPGQAETVFQGQQAFS--SWAAFPSALKLAPGLLEHPH----DGRDGGGDGRLRTTHGERLRRPKDRKGGSAGNGXXXXXXXXXXXXXXXXDSSSYDNIGGGPSGVTGLTVELAPGVLAATNRRGSGGGGWYASSGELTDEWREELMSESLDVHDKSFWSSGWSTKLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVLLGLGGTEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQVRRAGV 1530
A+AA T P L ++ L TTA + F H F+AA W+ RL D AP+L CA R + + L L A+ RVV+ S +HG C +ATA+ QA + + Q+ F S++ FPSALKLAPGL++H +G G RL HG +R S V GL V+L P L A + A + + +LMS S+D+H +FWS D A G SS GG V AR+W++AA V+ L G + GD+CSWD + ++ DD L + G+DHLL GRGAGG+ E+ EL VACFM L+SF A RPEVLRVSP ++LN AA +QSA+ T++P+TDAGLDGTGEVIQV G+
Sbjct: 23 AAAADTWSPPSLELVENGLATTAKDDFNGHARAFEAAATWNGERLRRSQDGTRAPHLCCAEYGHGRE-TFSRLKQFLSPDAV--RVVSHSEDHGACFLATASHAQASAIMEDQEQFGLESFSPFPSALKLAPGLVDHSESREVEGEPSSGQDRLGARHGGTMRM----------------------------------------SNVEGLNVKLTPDTLPARS----------AGAESFIIDLLGDLMSASVDLHSTNFWS--------DPVMAGGEHLSSHGGA--VRARDWSKAASVVHELS-EAAGTSPGDICSWDEVALIQAGDDSLLVTGLDHLLFSGRGAGGSHEEESTELHVACFMGLVSFFAGRPEVLRVSPRHTKRVLNEAARGIIQSASATDTPLTDAGLDGTGEVIQVVDTGL 382
BLAST of mRNA_Ecto-sp13_S_contig5777.16204.1 vs. uniprot
Match: A0A6H5JQT4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT4_9PHAE) HSP 1 Score: 221 bits (563), Expect = 3.760e-59 Identity = 156/420 (37.14%), Postives = 220/420 (52.38%), Query Frame = 1
Query: 304 TLPHPPLSVIRGALLTTAGETFR-HQGEFKAAVEWHEARL---DDARPAPYLACASPDSDRGGSGATLSHVLGAGAIGGRVVASSAEHGVCVVATATPGQAETVFQGQQAFS--SWAAFPSALKLAPGLLEHPH----DGRDGGGDGRLRTTHGERLRRPKDRKGGSAGNGXXXXXXXXXXXXXXXXDSSSYDNIGGGPSGVTGLTVELAPGVLAATNRRGSGGGGWYASSGELTDEWREELMSESLDVHDKSFWSSGWSTKLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVLLGLGGTEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGG-NEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQVRRAGV 1530
+LP+P L ++ AL TTA + F H F+AA W+ RL D AP+L CA R + + L L A+ RVV+ S + G C A+A+ QA + + Q+ F S++ FPSALKLAPGL++H D G RL HG R+R S V GL++EL PG LA+ + + + +LM S+D+H +FWS G G+ G V AR+W++AA V+ L G + GD+CSW+ + V H + D+L + G+DHLL GRGAGG ++G E+ EL +ACFM L+SFLAS+PEVLRV+P ++ LLNA+A N+QSA +T++P+TDAGLDGTG+V+QV +GV
Sbjct: 18 SLPYPSLELVENALSTTAKDDFNGHARAFEAAATWNGERLRHRQDETRAPHLCCAEYGHGRE-TFSRLKQFLSPEAV--RVVSHSEDLGACFFASASHAQASAIIEDQEQFGLESFSPFPSALKLAPGLVDHSQRHDKDKETTTGLDRLSARHGARMRM----------------------------------------SNVEGLSIELTPGTLASRS----------VEAEAFISDTLGDLMLASVDLHSTNFWSD----------QNMGGGEQLSFPGGAVRARDWSKAASVVHELS-EAAGTSPGDICSWNRVSVHHAEGDVLLVSGLDHLLHSGRGAGGRSDGGESAELHIACFMGLVSFLASKPEVLRVAPRQSQALLNASARANIQSATVTDTPLTDAGLDGTGQVVQVIDSGV 373
BLAST of mRNA_Ecto-sp13_S_contig5777.16204.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA) HSP 1 Score: 214 bits (545), Expect = 3.200e-57 Identity = 163/424 (38.44%), Postives = 226/424 (53.30%), Query Frame = 1
Query: 283 WGASAALTLPHPPLSVIRGALLTTAGETFR-HQGEFKAAVEWH----EARLDDARPAPYLACASPDSDRGGSGAT-LSHVLGAGAIGGRVVASSAEHGVCVVATATPGQAETVFQGQQ-AFSSWAAFPSALKLAPGLLEHPHD-GRDGGGDGRLRTTHGERLRRPKDRKGGSAGNGXXXXXXXXXXXXXXXXDSSSYDNIGGGPSGVTGLTVELAPGVLAATNRRGSGGGGWYASSGELTDEWREELMSESLDVHDKSFWSSGWSTKLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVLLGLGGTEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQVRRAGV 1530
WG SA TLP+P LSV+ G+LLTTA ++F H F+ A +W ++ +D AP+L C + +RGG L +L GA+ R VA S+ HG C TA+ +A + +S + FPSALK+APG+LEH + GRL TTHG +R+ GN V GL +EL+PG L A + +G E ++LMS+S+D+H + WS D AA G ++ G V REW+ AA ++ L G + GD+CSWD + + + +DLL + G+DHLL + GA G++ EA EL+VACFM L+SFL++R EVLRVSP A +LLNA A +QSA +TE+P+TDAGLDGTG+VIQV G+
Sbjct: 22 WGGSAN-TLPYPSLSVVEGSLLTTAQDSFDGHAKAFETAAQWTGEILRSKEEDNARAPHLVCT--EYNRGGKTLPRLQELLSPGAV--RPVAHSSTHGACFFVTASHAEARAMSDSPYYGLTSISPFPSALKVAPGVLEHGVSLDQASQSPGRLTTTHGHLMRK---------GN-------------------------------VEGLNMELSPGTLPAHS----------PEAGMFIAELLDDLMSDSIDLHGGNVWS--------DPVAANGEHLTTPAGA--VRKREWSMAATLVHQLA-VAGRTSPGDICSWDSISMHYAGNDLLLVSGLDHLLHKENGAIGSD-EEATELRVACFMGLVSFLSNRLEVLRVSPRHADRLLNAVARTIIQSATITEAPLTDAGLDGTGQVIQVIDTGL 378
BLAST of mRNA_Ecto-sp13_S_contig5777.16204.1 vs. uniprot
Match: A0A2I6U1S5_SACJA (Subtilisin n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1S5_SACJA) HSP 1 Score: 207 bits (526), Expect = 1.970e-54 Identity = 161/420 (38.33%), Postives = 223/420 (53.10%), Query Frame = 1
Query: 283 WGASAALTLPHPPLSVIRGALLTTAGETFR-HQGEFKAAVEWH----EARLDDARPAPYLACASPDSDRGGSGAT-LSHVLGAGAIGGRVVASSAEHGVCVVATATPGQAETVFQGQQ-AFSSWAAFPSALKLAPGLLEHPHDGRDGGGD--GRLRTTHGERLRRPKDRKGGSAGNGXXXXXXXXXXXXXXXXDSSSYDNIGGGPSGVTGLTVELAPGVLAATNRRGSGGGGWYASSGELTDEWREELMSESLDVHDKSFWSSGWSTKLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVLLGLGGTEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQV 1515
WG SA +LP+P L V+ G+LLTTA E+F H F+ A +W ++ +D AP+L C + +RGG + L +L A+ R VA S+ HG C TA+ +A + +S + FPSALK+APG+LEH RD GRL TTHG +R+ GN V GL +EL+PG L A + + +G E ++LMS+S+D+H + WS D AA G ++ G V REW+ AA ++ L G + GD+CSWD + + H +DLL + G+DHLL + GA G++ EA EL+VACFM L+SFL+SR EV RVSP A +LLNA A +QSA +T++P+T AGLDGTG+VIQV
Sbjct: 22 WGGSAN-SLPYPSLGVVEGSLLTTAHESFDGHAKGFETAAQWTGDIIRSKEEDNARAPHLVCT--EYNRGGETLSRLQELLSPEAV--RSVAHSSTHGACFFVTASHAEARAMSDNPYYGLTSISPFPSALKVAPGVLEHGVS-RDQASQSPGRLATTHGHLMRK---------GN-------------------------------VEGLNLELSPGTLPAHSPQ----------AGMFIAELLDDLMSDSIDLHGGNVWS--------DPVAANGEHLTTPAGA--VRKREWSMAATLVHQLA-VAGRTSPGDICSWDSISIHHAGNDLLLVSGLDHLLHKESGAIGSD-EEATELRVACFMGLVSFLSSRLEVSRVSPRHADRLLNAVARTIIQSATITKAPLTAAGLDGTGQVIQV 373
BLAST of mRNA_Ecto-sp13_S_contig5777.16204.1 vs. uniprot
Match: D8LQI1_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI1_ECTSI) HSP 1 Score: 187 bits (476), Expect = 1.220e-47 Identity = 149/416 (35.82%), Postives = 205/416 (49.28%), Query Frame = 1
Query: 316 PPLSVIRGALLTTAGETFRHQGEFKAAVEWHEARLDDARPAPYLACASPDSDRGGSGATLSHVLGAGAIGGRVVASSAEHGVCVVATATPGQAETVFQGQQAFSSWAAFPSALKLAPGLLEH-----PHDGRDGG------GDGRLRTTHGERLRRPKDRKGGSAGNGXXXXXXXXXXXXXXXXDSSSYDNIGGGPSGVTGLTVELAPGVLAATNRRGSGGGGWYASSGELTDEWREELMSESLDVHDKSFWSSGWSTKLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVLLGLGGTEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQVRRAGV 1530
P L LLTTAG F + F A W +A R +PYL+C R L LGA A+ + V+S+A HG C + TA+P +A + + F+++ AFP+ALK+APGLL+H P RD GRL TTHG ++ DS+ GL VEL+PG L + + G A + E E + L S SLD+H + WS + +G GD G + REW+RAA ++ +E T VC W+ +VV H +D+L + G+DHLL +GR G EA EL++AC+M L+SFLASR EVL+V+ LNAAA +QSA++ +P+TDAGLDG+GEVIQ+ AGV
Sbjct: 25 PSLGFFEQTLLTTAGADFDSEAAFAFASAW-QAGDRQGRSSPYLSCVEHGEGRHAY-RKLEGFLGARAV--KPVSSTATHGACFMVTASPAEAAQLSSWED-FTTFGAFPAALKIAPGLLDHGSCDGPAAARDAATTTSDCSAGRLSTTHGASMQ----------------------------VDSAH------------GLMVELSPGTLPSHS-------GGDAKAHEFIQELLKSLSSPSLDLHAITCWS---------DLVMKG-GDHLFSAAGALRGREWSRAATLVNERSESEQ-ETPSQVCGWEQVVVHHAANDVLLVAGLDHLLYDGREVSGASEEEAAELRMACYMGLVSFLASRHEVLKVAGWNRKVNLNAAARATIQSASVDSTPLTDAGLDGSGEVIQIIDAGV 377
BLAST of mRNA_Ecto-sp13_S_contig5777.16204.1 vs. uniprot
Match: D8LSW0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW0_ECTSI) HSP 1 Score: 157 bits (396), Expect = 3.420e-37 Identity = 140/412 (33.98%), Postives = 194/412 (47.09%), Query Frame = 1
Query: 322 LSVIRGALLTTAGETF-RHQGEFKAAVEWHEARLD----DARPAPYLACASPDSDRGGSGATLSHVLGAGAIGGRVVASSAEHGVCVVATATPGQAETVFQGQQAFSSWAAFP--SALKLAPGLLEHPHDG--RDGGGDGRLRTTHGERLRRPKDRKGGSAGNGXXXXXXXXXXXXXXXXDSSSYDNIGGGPSGVTGLTVELAPGVLAATNRRGSGGGGWYASSGELTDEWREELMSESLDVHDKSFWSSGWSTKLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVLLGLGGTEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGNEGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQVRRAGV 1530
L I+ ++A + F R Q + AA W+ RL + APY+ACA D +G T + RV + A+ G C + TA P A V + + F +A P +LKLA LL+H D R G D + H LR + + DN V GL+V L+PGVL A GG + + +W +L SES+++ SFWS D A D REW+RAA V+ GL ++ T+G++C + L + H DDL+ ++GM+HLLP G P E + AC+M LLS LA++PEVLRVSP ++ +L NA A VQSA TE+P+ DAGLDGTGEVIQV +G+
Sbjct: 14 LGKIQAITASSAFDDFARSQSAYSAASSWYNDRLSYDAAEGSTAPYVACA--DYKQGRHALTSLETAFTKSAVHRVSNTEAD-GTCFIVTALPSSATAVIRAPEDFDLLSAAPLLPSLKLATSLLDHGPDTSPRLGAADDFDLSDHSAPLR-------------------------STYGEGMTLDN-------VHGLSVRLSPGVLTA--------GGRESFAEAFLRDWHADLTSESVNMRRASFWS--------DSDADRSEYDV-------TRVREWSRAAAVVDGLA-SKSARTVGEICGFGKLKLRHVADDLVLVEGMNHLLP------GKRFPS--ETRTACYMGLLSQLAAKPEVLRVSPLQSARLHNAVANALVQSATTTETPLLDAGLDGTGEVIQVVDSGL 358 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5777.16204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5777.16204.1 >prot_Ecto-sp13_S_contig5777.16204.1 ID=prot_Ecto-sp13_S_contig5777.16204.1|Name=mRNA_Ecto-sp13_S_contig5777.16204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=510bp LLVPPPPLARTAHGPSSETSDYAKDGCADARVSLFAGGQQGRVGFERGKTback to top mRNA from alignment at Ecto-sp13_S_contig5777:404..4708- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5777.16204.1 ID=mRNA_Ecto-sp13_S_contig5777.16204.1|Name=mRNA_Ecto-sp13_S_contig5777.16204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4305bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5777:404..4708- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5777:404..4708- >mRNA_Ecto-sp13_S_contig5777.16204.1 ID=mRNA_Ecto-sp13_S_contig5777.16204.1|Name=mRNA_Ecto-sp13_S_contig5777.16204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1530bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5777:404..4708- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |