prot_Ecto-sp13_S_contig5775.16202.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5775.16202.1
Unique Nameprot_Ecto-sp13_S_contig5775.16202.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length145
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5775.16202.1 vs. uniprot
Match: D7FJ94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ94_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 2.010e-88
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0 
Query:    1 MDQRKRAPSGRSEPPGAGGGETFAEAPAPTVPVEVLDTVFEFLDGNGLLSCEAVSYCWRRATDRTNLWQRACMSAFPHLRDYYFSRSPYTCCSAYEGDYRETFLDGNRGNRSTVLDWNMEAVTGGAADGAEGMEGGDPEQ 140
            MDQRKRAPSGRSEPPGAGGGE FAEAPAPTVPVEVLDTVFEFLDGNGLLSCEAVSYCWRRATDR +LWQRACMSAFPHLRDYYFSRSPYTCCSAYEGDYRETFLDGNRGNRSTVLDWNMEAVTGGAADGA+GMEGGDPEQ
Sbjct:    1 MDQRKRAPSGRSEPPGAGGGEAFAEAPAPTVPVEVLDTVFEFLDGNGLLSCEAVSYCWRRATDRAHLWQRACMSAFPHLRDYYFSRSPYTCCSAYEGDYRETFLDGNRGNRSTVLDWNMEAVTGGAADGADGMEGGDPEQ 140
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5775.16202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJ94_ECTSI2.010e-8897.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 31..71
e-value: 0.0047
score: 26.2
IPR001810F-box domainPFAMPF12937F-box-likecoord: 30..73
e-value: 9.0E-8
score: 31.9
IPR001810F-box domainPROSITEPS50181FBOXcoord: 25..71
score: 9.444
NoneNo IPR availableGENE3D1.20.1280.50coord: 21..111
e-value: 1.5E-8
score: 36.4
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 27..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5775contigEcto-sp13_S_contig5775:5563..8406 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5775.16202.1mRNA_Ecto-sp13_S_contig5775.16202.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5775 5563..8406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5775.16202.1 ID=prot_Ecto-sp13_S_contig5775.16202.1|Name=mRNA_Ecto-sp13_S_contig5775.16202.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
MDQRKRAPSGRSEPPGAGGGETFAEAPAPTVPVEVLDTVFEFLDGNGLLS
CEAVSYCWRRATDRTNLWQRACMSAFPHLRDYYFSRSPYTCCSAYEGDYR
ETFLDGNRGNRSTVLDWNMEAVTGGAADGAEGMEGGDPEQASEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR036047F-box-like_dom_sf