mRNA_Ecto-sp13_S_contig5770.16195.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5770.16195.1
Unique NamemRNA_Ecto-sp13_S_contig5770.16195.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig5770.16195.1 vs. uniprot
Match: A0A6H5L2R6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R6_9PHAE)

HSP 1 Score: 560 bits (1443), Expect = 2.080e-194
Identity = 320/371 (86.25%), Postives = 323/371 (87.06%), Query Frame = 1
Query:    1 MAMIERQFDDEVQANDVDIEFLGGGSLAPALAEQGAAATPNRSSPIVGMRGGLEGPGAAAEPIRGLAAFGSHGSVQDSSSSAVSSVGRYQHXXXXXXXXXVGPGGSSPISSTRPLAPDETQGAVAGGESNGAAAR-RGSGTEGGGENASGRERRTXXXNSAQRSGARSNSPYRGGGGVSRTPGQGASSPGAGRQRENPGYRVLQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPRRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPDMFIVHRDLKPDNVGFKADGTLKL 1110
            MAMIERQFDDEVQ NDVDIEFLGGGSLAPALA QGAAATPNRSSPIVGMRGGLEGPGAAAEPIRGLAAFGSHGSVQDSSSSAVSSVGRYQHXXXXXXXXX                                    RGSGT    ++ S RERRT   NSAQRSGARSNSPYRGGGGVSRTPGQGASSPG+GRQRENPGYRVLQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKP RFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPDMFIVHRDLKPDNVGFKADGTLKL
Sbjct:    1 MAMIERQFDDEVQGNDVDIEFLGGGSLAPALAAQGAAATPNRSSPIVGMRGGLEGPGAAAEPIRGLAAFGSHGSVQDSSSSAVSSVGRYQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSGTXXXXDSTSVRERRTNSSNSAQRSGARSNSPYRGGGGVSRTPGQGASSPGSGRQRENPGYRVLQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPDMFIVHRDLKPDNVGFKADGTLKL 371          
BLAST of mRNA_Ecto-sp13_S_contig5770.16195.1 vs. uniprot
Match: D7FS28_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS28_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 7.730e-101
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 1
Query:  637 MTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPRRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPDMFIVHRDLKPDNVGFKADGTLKL 1110
            MTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKP RFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPDMFIVHRDLKPDNVGFKADGTLKL
Sbjct:    1 MTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPDMFIVHRDLKPDNVGFKADGTLKL 158          
BLAST of mRNA_Ecto-sp13_S_contig5770.16195.1 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA)

HSP 1 Score: 205 bits (522), Expect = 6.550e-57
Identity = 104/175 (59.43%), Postives = 129/175 (73.71%), Query Frame = 1
Query:  592 GYRVLQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPRRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPD--MFIVHRDLKPDNVGFKADGTLKL 1110
            GY  + W +L  + YMT GAMC IYSAE  G KV VK+PR DCE+P +AEHDLEVEL+VL  + H+HI+ L+GAG RE  P RFLVLE+LE+GTLAD+L+  A      + + +  K TKKY  F+ VTMLER+MELA ALE+LH+ +     F+VHRDLKPDN+GFKADGTLKL
Sbjct:  131 GYTKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKL 305          
BLAST of mRNA_Ecto-sp13_S_contig5770.16195.1 vs. uniprot
Match: A0A835Z8Z5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z5_9STRA)

HSP 1 Score: 135 bits (341), Expect = 6.100e-33
Identity = 78/171 (45.61%), Postives = 100/171 (58.48%), Query Frame = 1
Query:  604 LQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPRRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPD--MFIVHRDLKPDNVGFKADGTLKL 1110
            +QW+EL  + Y+  GAMC IYSA L G KVAVKI R DC++P+ AEHDLE                            RFLVLE+LELGTLAD ++    +    S  A+  K  K+      V MLER++E+A A+E++HY +      ++HRDLKPDNVGF ADGTLKL
Sbjct:   32 VQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEY---------------------------RFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKL 175          
BLAST of mRNA_Ecto-sp13_S_contig5770.16195.1 vs. uniprot
Match: A0A835YNL8_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL8_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.780e-26
Identity = 74/157 (47.13%), Postives = 94/157 (59.87%), Query Frame = 1
Query:  652 MCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPR--RFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHM--PDMFIVHRDLKPDNVGFKADGTLKL 1110
            MC IYSA+  GVKVAVK PR +  + A AE DLE+EL +L+ + H+HI+ LIGAG      R  RFLVLE+LE GTL D +   A          R     KK     ++  LER+ +LA ALE+LH     P   ++HRD+K +N GF ADGTLKL
Sbjct:    1 MCRIYSAQWQGVKVAVKAPRDESRDCAGAERDLELELHLLQHLHHRHIIKLIGAGWHSVGRRLSRFLVLEYLEGGTLGDAIAQGAASRGRMPILKRLLGGHKKTRHQNVLQALERATQLADALEYLHCPGGGPATAVLHRDIKAENCGFTADGTLKL 157          
BLAST of mRNA_Ecto-sp13_S_contig5770.16195.1 vs. uniprot
Match: A0A6H5JUQ3_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUQ3_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 2.130e-23
Identity = 67/186 (36.02%), Postives = 105/186 (56.45%), Query Frame = 1
Query:  604 LQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPRRFLVLEFLELGTLADKLDGDAE------EAANGSAFARRQKR-----TKKYLDFYMVT----MLERSMELALALEHLHYH-MPDMFIVHRDLKPDNVGFKADGTLKLV 1113
            + W+EL  V ++  G+ C IY+A     +V VK+ RKD ++ A+   +LE+EL +L+RV H++I+ L+GAG   ++P RFL++  L+ GTL+ + D  +           G  F+  Q R     T+ +   ++V     +  R      AL HLH   +P   +VHRD+KPDN+GF ADG LKL+
Sbjct:  253 VAWAELEDVDFLVNGSRCTIYTAVYKDQQVVVKLMRKDVQDAALVRDELELELALLRRVRHENIVRLLGAG---KEPERFLIIARLDGGTLSQRCDHGSRLRDRRGRFKTGKPFSHMQVRRFFTTTQSHAGGHLVAEAGRLFNRKEVQRCALRHLHEEAIPGRMVVHRDVKPDNIGFNADGDLKLL 435          
BLAST of mRNA_Ecto-sp13_S_contig5770.16195.1 vs. uniprot
Match: A0A4D9DAK6_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAK6_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.120e-18
Identity = 57/172 (33.14%), Postives = 102/172 (59.30%), Query Frame = 1
Query:  604 LQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPRRFLVLEFLELGTLADKLD-GDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYH-MPDMFIVHRDLKPDNVGFKADGTLKLV 1113
            +QW++L  V  +  G    +Y+A  + + V VKI ++DCE   +   ++  E+++++ ++H +I+  I +G    +PR F+V+E LE G+L  +L         + + F  R  R      F   ++L+ ++++A AL+++H   +P   ++HRDLKPDNVGFKADGTLK++
Sbjct:  189 VQWTDLHHVERLVDGGTSVVYTATYNRLPVIVKILKEDCERNELRLREIRGEIELMQSLNHPNIVQYIASG---WEPRTFVVMERLEGGSLNQRLGFAPTHSGVHRNNFFTRDVRKA----FSYESLLKYALQMAEALKYMHDEALPGYAVMHRDLKPDNVGFKADGTLKIL 353          
BLAST of mRNA_Ecto-sp13_S_contig5770.16195.1 vs. uniprot
Match: A0A7S2R8G2_9STRA (Hypothetical protein n=4 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8G2_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 8.030e-16
Identity = 62/178 (34.83%), Postives = 91/178 (51.12%), Query Frame = 1
Query:  598 RVLQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAE--HDLEVELDVLKRVSHKHILGLIGAGNREQKPRR---FLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPDM--FIVHRDLKPDNVGFKADGTLKL 1110
            R + W EL  VT +  G+   +++A LD   V +K P+       +AE   +L+ E +VL R+ H +I+   G G           F+V+E L+ G L+D+L               +  RT   + F  + +L  S +LA AL +LH H+ D     +HRDLKPDNVGF ADGTL+L
Sbjct:  313 REIMWHELQNVTLLKHGSGTTLFTARLDSESVVIKAPKHGLSSSEIAEVTRELQHESEVLARLRHPNIIRFYGCGTVALDDHTIVFFIVVEHLDGGILSDRL---------------KLNRTTPQMTF--LDVLRFSCQLAEALHYLH-HLADAGTITIHRDLKPDNVGFSADGTLRL 472          
BLAST of mRNA_Ecto-sp13_S_contig5770.16195.1 vs. uniprot
Match: D7FM08_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM08_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 2.780e-15
Identity = 63/176 (35.80%), Postives = 94/176 (53.41%), Query Frame = 1
Query:  598 RVLQWSELSKVTYMTMGAMCEIYSAELDGV-KVAVKIP-RKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKP--RRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHM-PDMFIVHRDLKPDNVGFKADGTLKL 1110
            R ++W EL+ + ++  GAMC  Y+A L G   V VK P R+  E     E +L++E   L  + H +I+ LIG+G R  K   + FLVLE+L   TLA+ +            F    K  K Y+ +     +  + ++A AL ++H+   P    + RDLKPDN+GF ADGTLK+
Sbjct:   22 RTIRWRELTGLQHLADGAMCSCYTAHLAGHGTVVVKKPSRRSNETLEEIERELDIEKAYLASLQHPNIVRLIGSGRRGIKNNFQPFLVLEYLSGNTLANLISKRRRGEFEIPHFVLDGK--KNYIPWAQA--MGWAQDMASALHYMHHEASPGYMYICRDLKPDNIGFAADGTLKM 193          
BLAST of mRNA_Ecto-sp13_S_contig5770.16195.1 vs. uniprot
Match: A0A7S0LS32_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LS32_9EUKA)

HSP 1 Score: 78.2 bits (191), Expect = 4.220e-13
Identity = 55/166 (33.13%), Postives = 87/166 (52.41%), Query Frame = 1
Query:  607 QWSELSKVTYMTMGAMCEIYSAELDGVK-VAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPRRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYH-MPDMFIVHRDLKPDNVGFKADG 1098
            +W E +   ++  GA C+++ A +DG   +A K+ R+D      A +DL+ E  +L+++SH+H++ ++G G    +P   LV       TLA +L   +E           Q R KK   + +   L   +ELA AL +LH   +P   ++HRDLKP NVGF  DG
Sbjct:   66 EWVEPTHKRWIAAGAFCDVWEAHVDGRGLIAFKVLREDLLADETAANDLKHEAQLLRQISHRHVVPMLGQGTISGRPAIALVKIT---STLATELPHPSETPIWV------QWRVKK--QWPLQRALRCGLELAQALSYLHDEPIPSSSVLHRDLKPGNVGFMLDG 220          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5770.16195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2R6_9PHAE2.080e-19486.25Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FS28_ECTSI7.730e-10199.37Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835ZE86_9STRA6.550e-5759.43Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835Z8Z5_9STRA6.100e-3345.61Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YNL8_9STRA2.780e-2647.13Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5JUQ3_9PHAE2.130e-2336.02Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A4D9DAK6_9STRA2.120e-1833.14Protein kinase domain-containing protein n=2 Tax=M... [more]
A0A7S2R8G2_9STRA8.030e-1634.83Hypothetical protein n=4 Tax=Rhizochromulina marin... [more]
D7FM08_ECTSI2.780e-1535.80Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A7S0LS32_9EUKA4.220e-1333.13Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5770contigEcto-sp13_S_contig5770:752..8839 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score316.6
Seed ortholog evalue1.5e-83
Seed eggNOG ortholog2880.D7FS28
Model size1119
KEGG koko:K14304
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005795,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006914,GO:0006928,GO:0006935,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007528,GO:0008088,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009894,GO:0009987,GO:0009991,GO:0010008,GO:0010506,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010970,GO:0010975,GO:0010977,GO:0012505,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016197,GO:0016241,GO:0016301,GO:0016310,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0017016,GO:0017137,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0023052,GO:0030030,GO:0030100,GO:0030154,GO:0030182,GO:0030424,GO:0030425,GO:0030705,GO:0031090,GO:0031175,GO:0031267,GO:0031323,GO:0031329,GO:0031344,GO:0031345,GO:0031410,GO:0031594,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032418,GO:0032501,GO:0032502,GO:0032879,GO:0032886,GO:0032989,GO:0032990,GO:0033036,GO:0033043,GO:0033267,GO:0033554,GO:0034613,GO:0034976,GO:0035556,GO:0036211,GO:0036465,GO:0036477,GO:0040007,GO:0040011,GO:0042147,GO:0042221,GO:0042330,GO:0042594,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043195,GO:0043198,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043679,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046907,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048489,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048846,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050768,GO:0050773,GO:0050774,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051020,GO:0051049,GO:0051093,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051493,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051683,GO:0051716,GO:0051960,GO:0051961,GO:0060284,GO:0060341,GO:0060548,GO:0060560,GO:0060627,GO:0061174,GO:0061564,GO:0061845,GO:0061919,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071212,GO:0071496,GO:0071704,GO:0071840,GO:0090128,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098791,GO:0098793,GO:0098805,GO:0098852,GO:0099003,GO:0099111,GO:0099174,GO:0099504,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1900242,GO:1901214,GO:1901215,GO:1901564,GO:1902115,GO:1902284,GO:1903421,GO:1990033,GO:1990138,GO:2000026,GO:2000171,GO:2000331,GO:2000785
Exons5
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-16_004570.1
Cds size1119
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463799.9173925-CDS-Ecto-sp13_S_contig5770:751..13161681463799.9173925-CDS-Ecto-sp13_S_contig5770:751..1316Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5770 752..1316 +
1681463799.9479382-CDS-Ecto-sp13_S_contig5770:4563..47511681463799.9479382-CDS-Ecto-sp13_S_contig5770:4563..4751Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5770 4564..4751 +
1681463799.961426-CDS-Ecto-sp13_S_contig5770:5150..52521681463799.961426-CDS-Ecto-sp13_S_contig5770:5150..5252Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5770 5151..5252 +
1681463799.9750636-CDS-Ecto-sp13_S_contig5770:7889..80061681463799.9750636-CDS-Ecto-sp13_S_contig5770:7889..8006Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5770 7890..8006 +
1681463799.989593-CDS-Ecto-sp13_S_contig5770:8692..88391681463799.989593-CDS-Ecto-sp13_S_contig5770:8692..8839Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5770 8693..8839 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5770.16195.1prot_Ecto-sp13_S_contig5770.16195.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5770 752..8839 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5770.16195.1

>prot_Ecto-sp13_S_contig5770.16195.1 ID=prot_Ecto-sp13_S_contig5770.16195.1|Name=mRNA_Ecto-sp13_S_contig5770.16195.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=373bp
MAMIERQFDDEVQANDVDIEFLGGGSLAPALAEQGAAATPNRSSPIVGMR
GGLEGPGAAAEPIRGLAAFGSHGSVQDSSSSAVSSVGRYQHHHHHPQGGG
VGPGGSSPISSTRPLAPDETQGAVAGGESNGAAARRGSGTEGGGENASGR
ERRTNSSNSAQRSGARSNSPYRGGGGVSRTPGQGASSPGAGRQRENPGYR
VLQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDL
EVELDVLKRVSHKHILGLIGAGNREQKPRRFLVLEFLELGTLADKLDGDA
EEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPDMFI
VHRDLKPDNVGFKADGTLKLVS*
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mRNA from alignment at Ecto-sp13_S_contig5770:752..8839+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5770.16195.1 ID=mRNA_Ecto-sp13_S_contig5770.16195.1|Name=mRNA_Ecto-sp13_S_contig5770.16195.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8088bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5770:752..8839+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCAATGATAGAACGCCAGTTTGACGATGAAGTTCAAGCAAACGATGT GGACATCGAGTTTCTGGGAGGAGGCTCGTTAGCGCCGGCGCTGGCGGAGC AAGGGGCAGCAGCAACGCCAAACAGAAGCTCCCCGATTGTCGGGATGCGG GGTGGGCTTGAGGGCCCCGGAGCGGCGGCGGAGCCCATCCGTGGGCTTGC GGCATTTGGCAGCCACGGCAGTGTTCAGGATAGCAGTTCTTCCGCCGTCT CTAGCGTTGGCAGGTATCAGCACCATCATCATCACCCGCAGGGAGGAGGG GTAGGCCCAGGTGGGAGCTCGCCGATATCGTCAACAAGGCCACTGGCACC GGACGAAACGCAGGGGGCAGTAGCAGGCGGAGAGAGCAACGGGGCGGCGG CGCGGAGAGGGAGCGGCACGGAGGGAGGTGGCGAAAACGCTAGCGGTAGG GAGAGGAGAACGAACAGCAGCAACAGCGCGCAGCGGTCGGGGGCGCGAAG CAACAGCCCTTACCGGGGAGGCGGCGGAGTTTCCCGCACGCCAGGGCAAG GGGCTAGTAGTCCAGGTGAGCTAGAGGCACAACGGTGCGGAAGGGGGCTG AATGTGGGCCTGCCCTGCGGAGGGAGGGGATACAGCCAGCAGCAGACAGA GCAGGTTTCAAAGTATACGATGTGTCCCGCTGTTGTTCGTTCCGCACGAA TGTTGAGATGCGTCGTTTCGTGGCTATATATCGGACACGAGAGAGATTGA GTTTTTGAACTGCTCCCTTCTTGGCACACGGCATGTAGGAGGCTTGTCCG CTTTCTCACGTGCTATGACGTCGCCTTGCAAGGTGTCGGTATTCTCCCCT GCCTTGCGACGTCTCCTTGCGGCAAAACCCACACGGACACGTTTGACTGC CCGCAGCGTTTTGGTTGCCCCTTCGCGGAACCCAGCCCCTCCCCAGAGTC TAGAAATCCCCGTCTTCTCTCTGGTGTGCTGTCCTACGAACAAGTGGTGG CGGTTCTGACCGGTTCGATGTGACCAAGCCTGATACACTGGTTTCAGCGG CGTATCCAAGTATACCGGGTTCAGTATGCAGTCTGCCTGACGGTTTTCTT CCCTCATCTCTGTCAATATGGAGGGGTAGGCTCCTCCAGACAACCACGTG TCCTTGCGCGTGTGCTCTTTACAGCACTAGCTACCCCCATGATCCCATCT GGTTCGCGTCCTTTGGTGAGCTCGACCACCCCGCTGCGTGTGAAGAAAAA CTCGAAGCGCTCGCTCTCTCTTCGTAATCTGCTGTACATTGGTGTGCTGC ATTTTAGTCCACACCACATCCACGCAGAGATTGCTTGATTTCCTGAACGG CACGTGTTAGCATCAGCAGAACGTGATGTCTGCTTCGCATGATCCTCCGT GTTTCCACAGGGTAGTTGTGTGCGCGTGAGTCACTCCCGTATTCTTGTAC TGGGAGAGGCATCAACAAACCGGTTCCCTTGGTGGTTGATTTCCTCGAAC AAAGTGTTGTCATGCGTGTATCTGTATGTTCCGTCTTCATAATGTACTGC TGTAGCGTCGTGTGTGTTTTTATTATTAACATGCTGTAGCGTCGTGTGTG TGTGTTTGTGGCGTGGAGGCCGCGTCGAAACAAGATTCAACAGCTGCCGT CCTTAGAGTGTACCCGCATGCTACTGCTGTACACAGCAGTCACTCAAGCG GCACGTGGCAGCCGCGACGTCTATTTACACAACCAGACAACACCTACCAC TTCAGAGCAAGACAGCAAATGTGCTGCGACCAACAAACCCACCGTATTAA AAATCGCCACATTGTCGAGACCATTGAACACCTTCAACCGCCGTGTGCGT ACGATAAAAAAATAGTAAATGAGGAGCGTCACAATTCTTCGTTGGGACAA CGTGCTCGTTCATGTCTTCGTGGTCCTTCGTCTGTACCGCCGCAGTGGTT GAGTGCTTCACTTGGTAGCTGGTTGTAGCCTCGCAAACCCTCTGACTTTT GGCACGTGGGTTCGAATCTCGGCACACCCACGGCAAAGCTGGCATTTTTT CTCACAATGTGCCAGAAACAACGCGAGGTCATTATTTGCTGCGCACGCAA GAAAACGGTCGACGAAGAAAAAAGGAAAGGAAAGGCTCAACAGATGGTCT CGTGACAAAAAATTACTATAATACGTGAAAGGCAACAGGCACGGCGCAGA AGTAAGTCAGGGAAAATGGGAAACTCCTGTGTGGCCCTGTGGCCGATGCT GCCAGCTTCCAGACGTTACGCCTATACCCTGGACGTCCAGAAGAAATCGG ACTTAATAAATACGCACACACCCGAACACCGCCCTCTCCGTTGTTCATGT CTTCATGAAAAGGGTGTCTTTGTTGTTTTCTTTTCCGTGCTGCTACAAAT GTGGTGCTGTCGTCCTTCGTGTATCATTGTTCCGATGTTCATAACCACGT CGGTTTGGGCTCGACGAAACCATGTGTACGTTCGCTTCTGTCACAACTCT CTCTCTGGGGCGTCCACCTTACTTCAGTGAGTGTTTGACCTCCTTATGTC TGGAGGCTGGCGAGTCTGATGCCCCACCTAAAGAGATAAGTGCAAACGTA TGCACATGTCCAATCATACTCTAGTGAACGAAAGTTAATCGATAACGCAT AGGGCCAATACAGCAGTTTTGGTCGCGCACAATTCACTGCTGACAACCCC TCTGAAAGTTAAGCTGCCTCGTAGTAAACTGGCGCTAGTGGTATGTATGT GTCGATGATATTTCAGGTATTTCTTCGGGGTAATGTCAGGGTAGAGTTAT TTTTGGTGGTTACTCTACCCTGAGTATTGCACCCTGTGTGTGACGAGAAA TCTATGTTTTGAGGCCAAATTTCGTGTCCTCCAATCGACAAGGCGGTCTG TGCCGGCTTTAGCTTCGCCCCGTCATGACTCGAGATCGAGAACGAAAAGA TACAATGGCGAAGATACTTAACGCAATAACTTATAGATCGTCGGCACACT GCAGCAGCACATGAATTTTTAGTTGCCGCTCTTGTGAGGACTTTTGGAAG TCATCCCGTGGTCGTCACACGTCCACACGGCAGGGGGTAGGAGGTGGGGG TGCAGGAAGCCACAGGTACCAAAATAGCGTCCGGGGGCGGGGCTGTAGAC ACGCTAACAGCGACAGCAGCGGCCTTGAGAGACACCTGTTGAATGGCAAA ACGAGTGTAGCGAATGGTAAACATCCATGATTCGAGTGACGGTATGACTA TGAGGTAAAAAAAGGCAAGGGCGTCACGATTTGTTCTTGCGTACACGAGG TTTTACTCCACGGTCGATGAAGGAAAGGGACGGCTCATTCCTTATGGCGA CAGAACATGGGGAGCAACATAATGGTATACTGAGAAACTAAACAAGTTGT TTTATCAGGCCTGACGAGGATCAACCGTGAGTCACAGCCATTTGATTGAG GTGGCACCAGCTCGATCAAGAGCTTTTGTGCCTGTACTCAGAATGTCTAG GCGATGAATGATCATAACGTAGGTTGTAAGATGCCACACCCCGTGGACCG ATTCTCGCATCTCGGTTTCTCCACGACGAAGAGATTGCCGATGTCAAATG ATGCATTTTTGGAAAGCTCTCGACGAGACGGTTTCAGCGCCGCAATTTTC GGCACCGTCACCGCTTTTCTTGCCGAGTAATCCAGCTTTGAATCGGTCCA GGGGGTGTGGTATCTTCCGTCATGTGACCTTCGGAAACCACTGCAGTTTT TTTCAATTCGCGCGATAGGAGGGTACTGACGTTATCAAACTATCGGAAAA ACTGTTTTTCAGGTGCTGGGCGACAACGAGAAAACCCAGGCTACAGAGTC TTGCAGTGGTCGGAGCTGTCCAAGGTCACGTATATGACCATGGGGGCGAT GTGTGAGATCTACTCGGCCGAGCTAGACGGTGTCAAGGTGGCGGTCAAGA TACCCCGAAAGGATTGCGAGGAGCCTGCAGTGGCGGAGCACGATCTTGAG GTGGGCGGTGGGAGGGGGGATGGGCTCGTGCAAGCTTCGTTTTGTAAGGG CAGTGTACTGAGTTTTCAACGGGAAAAGAGGGTCCAGTTATATCCAGGAA GAGCGCAAGAAGCCTGCGATCGTGGTGCTCGCTCTCAAGACTAGGAGTGG GAAAGGGCTGATGTTGATGTGTAGGAGTGGTTTGAGCGTCGGATTAATGG CTAGGAATCGAGAGGTGAAAGTGTGGACGGTGGGTGGGATGTCCTCACCC CGTGCCACGCGAGACAAGTGAGTGACCCGTGACCCTTTTTGTTCTTGTGT TCCACGTTCAGTACCGTTCCGTTGTCTCCATTACCTAGTACCTTGCTCTT TCCGTACTAGTCTTAACCCTTTTGGCACGTTCGTTCTTCCCCGTCGCAGG TTGAGCTGGACGTGTTGAAACGCGTGAGCCATAAGCACATCCTGGGCCTC ATCGGGGCTGGAAACCGAGAGCAAAAGCCCCGCCGATTTCTCGTGCTGGA GGTATGTCTGTCTGTGTGTCCGTCTTCTTAATCGTATGCAGCCTGGCCGT TGAGGGCGGTTTTTTTGTTAGGTCGATCGCACCGCATGCAGCCTGGGGTG TGGCAATCCCCCCCTCCCTCCTCCCCTCGAGGATAGTGGGAGTAGGAACA TAGCATTAGTGAGGGCCAGGCAGGTTTCCAAAAGAAGAGGGGGTGCATAG ACCACGCGTTTATGGTAGGGAGAATCATCCAAAGGTAGAAAGAGGGCGGG AAAGCCGACGTACTGCTTCTTCCTGGACGTGAAAAAGGCATACGATACCG CATGGAGAAATAGGCTGTAGAAAAAGTCGTACAAGTACGGGATCAAGGGG AACATGTGAGAGTGCTGAAAAAGATGACAGAGTGTACGAAAAGCGCGGTC ATGCTAGACGGAGAACTGTCCTAGTTCTTCGACATTGAGCAGGGGGTCCC GCAAGGTTGCACGCTGTCTGTCCCCAACATTGTTCCAGGTTTTCATCAAC GATCTGTTAAAATTCGTAGAGGCAGTCCGGAAGGGAGTTAAAGTAGGGGA CACGGAAACTTCGGTGTCAGGAATGCTGTTAGCGGATGATTTTATCGGTA TGTGGCACACTCCTGAGGGACTGCAACTGAAAATTGACGCGGCGAAGAAT TTGATTGATAAGTGGAGATTGTCTGCCAACGTTAACAAGAGTGCCGTCAT GGTATGCAACGAGGACAGGGAGGAACCAGTAGAACATAGACGGAAGTTGG GGATCGGAGAGATTGCAGTAGTGGACCAGTACATATACCTCGGAGTAGAG ATCGCGAAAGACTGCTCGTGGAATGCACACATCTCCAAAGTAGCGGAAAA GGGCAAAGCACGAGCAGGGAAGCTGCACCCCATTCTCGCAAACCGGCACC TCGATACACTGATCAAATTGACGGTTTTGAAGAGCGTTATCGTACCGCCG CTAGAGTACGCCTGACATTTATGGGAAGGAAATAAGAAGGTAGTGAAAGA ACTCCAGGCGACGCAGACGAAAGCAGCGAAAAGCATCTAGGATGCTTTAA GCGCACAAGTAATGCAGCCGTCAGGGCAGAAATAGGGATCCAATCTCTGC GGTCGGGAAGAGACGCAAGGAAGCTGACATGGCAGTATCGCATATGCGGG ATGGTAGAAGAGAGTTTGCCGAGAGTAGTATGGGAGGCGAAGTAGGCAAA CAAAAAGAGGGGAAGACAACCCACGGAATTTGTCAAGGTTGTAGAGGACG TATGGGAGGGGTTCGACATCAACCAAGATGAAACGCTGGAAACGGAGGGT CTAAAGGGGTTAAAGGAGAAGACATCTGTTGCGTGTCCCGAGAGAGAAGA ACAGAATCTCAGGAAAGAAACCGAGGATAAGGAGGGTTTAGAAGTGTACG GAATGTTGGAGAGAAGGGAAAGGTTCAAGGATTACCTACATGGACCAATG GATGCAGGAACAAAGCTTAAGGTCAAATTCAGGACCGGGGACATAGGCCT TGGAGAACGTCGACGAAGACATGCCGGTAGGACGGTAGACGACGAAGACG ACAAGTTCAAATGTGATTGCGGCTTCGAATGCGAAGACTGTGTCCATGTA GTCGCGGAATGTCAGTTGTACAAAGATGAGAGGGAAGTGTACACGACTGA GCTGGGAAAAATAGATGGGAGATACAGGGAGATATTGGAGGCATGGGATA GAGAGGAAAGGACGGTAGCTGTGCTGGGGAGTAGGAAGTGGTTTGACAAG GCGGGAAGGGATATCGTTCGGGTAGACAGACTAGGGAAGACATTTCTGAG CCATCTTTGGCAAAGTAGGAAGGAACGATTGGCCATCGGTGATCGGTCCG GTGCGAACAATGCTCCTTGAGCCTGGTCGGCGGAACCCCAATGAAGTGTT CCTTCCAGGCGTATTAGGGACGTCTATGTTTTTCGGTCAAAGCTCTGCGG CATGCATTGTTTGGTTCATGATTGGAGTACATCACACGCCGCCATTGGAT GGATTTTTTCGAGGGTGTGAATAGCTCCATGAGCAACGGGGAGGGGTGAC GAGCGACAGATAATTCGCATCTCCGGTAAGACGAAAATCTCTCTCGACTA TCGCTAGTCGTGTGTTTCCGATGCCGCCGTTTGGGTCTGCAGCTCACCTG CTGCTTCTTTGTGTTGATGGTTGGAAGATCGGCCTACGGATGGGGAGGCG GCCACCCCCTGGTGCGCTTTGCCGTTCGTACACGTGGAAGCAAGACAGAA TAGGGTGGCATGGATGGCATCAACTACTTAATCATGTGCTTCTCTGTCTC GCAGCAGCATGCATGCGCTTGGTGCGTCTGGTGTACGCCGGATCTTTTTT GTGTTTTGGGGTTTCCGGTTCGCGGCTTGACGTAAGCTGGGCCCTTAGAA CGCGCAATGTTTTGATGTTGCGGTTCTTTCTTACTAAGAGTACATGGTTT GAGTCTTACAAAGGGCACATGGTTGTGTCATGCGAAGGGCATATGGCTTT TGCCTTACCAAGAGCATACACCTATGTCTTAAACAGGGTACACGGCCCAG CAGCCCCTGGGGGGAGGATAAGACTCTTATCACGAATCGTGTTTGCATGT CGGTGTGCCACGTTCGCACGCAATATAACACAACACAGTTCCTGGAGCTA GGGACTCTGGCGGACAAGTTGGATGGGGACGCGGAAGAGGCGGCTAACGG GAGCGCTTTTGCCAGACGGCAGAAGAGGACGAAGAAGTACCTGGACTTCT ACATGGTAAGGAGGGGGTCACTTCTCTCTTCCATTTGGTCTTGTAATGTT ATGTAGCGCTCTCTTTTCTGTGTTGGTATATGTTGATATTGCATGAGGAG GCGTTGTTCATATTCCACGCGCAGTTTCATTATGTAACGGTCTGTTTTCT GTGTTGTGTATTTTTTGTCCAACGATCTGCGTGGTATATGGATGTGCATG TGCAGTGCAGCATGTTCGTTTTCGTGCTTTGGTTGGTATGGTAGCACGTT ATTGCCGAAGCAGCCAGAGCACGCCATGGTTGGACGCTACACGCATCTGC GATTTGAACTCGATGCCGTCGGCTGTAAAACCAGAGACGAGGTGTGGATA ACACGACTCATGACCGCGAGACTTGTTGTCCACCTACAGCGGCATCTGGT GTAGATATTGTTTGTTGTTGTTTCTTTTACATATGGACAGCAAAAGCGAT ACCAAGACTTGTGTGCGTGCCATACACTGGGAAGCACTTCGTTTTGCGCT TCGGAACGCTCAACAGCAACGAGAAGCAGTCTGATTTGTCCTAGACCCCT TTTTACGCGTGGAAATGGATTTGTGGTGATCTTCATTAGAAAATAGAAAA ATATTTTCAAGACGGCACCCACGGTACATAATGTGTTGGTTGTTTGTTGT TGATGTCGTTCTCGTCTTTTTTTTGTTCTTTCGTACTAAAGGTGACTATG CTGGAACGTTCAATGGAGCTTGCCTTGGCGCTGGAGCACCTGCACTACCA CATGCCCGACATGTTCATCGTTCACCGAGACCTGAAGCCGGATAACGTGG GCTTCAAAGCTGACGGGACCCTCAAGCTGGTGAGCTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5770:752..8839+

>mRNA_Ecto-sp13_S_contig5770.16195.1 ID=mRNA_Ecto-sp13_S_contig5770.16195.1|Name=mRNA_Ecto-sp13_S_contig5770.16195.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1119bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5770:752..8839+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCAATGATAGAACGCCAGTTTGACGATGAAGTTCAAGCAAACGATGT
GGACATCGAGTTTCTGGGAGGAGGCTCGTTAGCGCCGGCGCTGGCGGAGC
AAGGGGCAGCAGCAACGCCAAACAGAAGCTCCCCGATTGTCGGGATGCGG
GGTGGGCTTGAGGGCCCCGGAGCGGCGGCGGAGCCCATCCGTGGGCTTGC
GGCATTTGGCAGCCACGGCAGTGTTCAGGATAGCAGTTCTTCCGCCGTCT
CTAGCGTTGGCAGGTATCAGCACCATCATCATCACCCGCAGGGAGGAGGG
GTAGGCCCAGGTGGGAGCTCGCCGATATCGTCAACAAGGCCACTGGCACC
GGACGAAACGCAGGGGGCAGTAGCAGGCGGAGAGAGCAACGGGGCGGCGG
CGCGGAGAGGGAGCGGCACGGAGGGAGGTGGCGAAAACGCTAGCGGTAGG
GAGAGGAGAACGAACAGCAGCAACAGCGCGCAGCGGTCGGGGGCGCGAAG
CAACAGCCCTTACCGGGGAGGCGGCGGAGTTTCCCGCACGCCAGGGCAAG
GGGCTAGTAGTCCAGGTGCTGGGCGACAACGAGAAAACCCAGGCTACAGA
GTCTTGCAGTGGTCGGAGCTGTCCAAGGTCACGTATATGACCATGGGGGC
GATGTGTGAGATCTACTCGGCCGAGCTAGACGGTGTCAAGGTGGCGGTCA
AGATACCCCGAAAGGATTGCGAGGAGCCTGCAGTGGCGGAGCACGATCTT
GAGGTTGAGCTGGACGTGTTGAAACGCGTGAGCCATAAGCACATCCTGGG
CCTCATCGGGGCTGGAAACCGAGAGCAAAAGCCCCGCCGATTTCTCGTGC
TGGAGTTCCTGGAGCTAGGGACTCTGGCGGACAAGTTGGATGGGGACGCG
GAAGAGGCGGCTAACGGGAGCGCTTTTGCCAGACGGCAGAAGAGGACGAA
GAAGTACCTGGACTTCTACATGGTGACTATGCTGGAACGTTCAATGGAGC
TTGCCTTGGCGCTGGAGCACCTGCACTACCACATGCCCGACATGTTCATC
GTTCACCGAGACCTGAAGCCGGATAACGTGGGCTTCAAAGCTGACGGGAC
CCTCAAGCTGGTGAGCTAG
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