prot_Ecto-sp13_S_contig5769.16191.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5769.16191.1
Unique Nameprot_Ecto-sp13_S_contig5769.16191.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length277
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5769.16191.1 vs. uniprot
Match: A0A6H5L192_9PHAE (HOOK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L192_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 1.420e-123
Identity = 210/248 (84.68%), Postives = 217/248 (87.50%), Query Frame = 0 
Query:   31 MDGRHEQGLVAWANTFSSSFPEGAAPAVSVADFTNGDALIPIARTILGDDHDDDDNDGQATASGWARVISYLLSADLIEKDVQVPTEEDTKRDMAVTCLEALLHHTCQDSCAGRATFIRQIMSLDTDVQSVLRHVVAGEEPSDEDGDACSSEAGSPSRDDGNGGASSSFPGSPTASAAAHLSPDSGGSRGRRASITTSGSSYDSSRSDEEGDLGLKSWYSPHPR-SARRKSKVPTGGGTGERAARVGP 277
            MDGRHEQGLVAWANTFSSSFPEGAAPA S+A FTNGDALIPIARTILGD+HDD D+DGQATASGWA VISYL SADLIEKD+QVPTEED+KRDMAVTCLEALLHHTCQD+CAGRATFIRQIMSLDTDVQSVLRHVVAGEEP DEDGDA SSEAGSP RDD            P A AAAHLSP SG SR RR SITTSGSSYDSS SDEE  LGL+SWYSPHPR SARRKSKVPTGGGTG RAARVGP
Sbjct:    1 MDGRHEQGLVAWANTFSSSFPEGAAPAASLAHFTNGDALIPIARTILGDNHDDHDSDGQATASGWAGVISYLHSADLIEKDLQVPTEEDSKRDMAVTCLEALLHHTCQDTCAGRATFIRQIMSLDTDVQSVLRHVVAGEEPLDEDGDASSSEAGSPYRDDRXXXXXXXXXXXPAAIAAAHLSPGSGASRRRRTSITTSGSSYDSSHSDEEDGLGLESWYSPHPRRSARRKSKVPTGGGTGGRAARVGP 248
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5769.16191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L192_9PHAE1.420e-12384.68HOOK domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY116907Hook domaincoord: 34..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5769contigEcto-sp13_S_contig5769:4559..5389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5769.16191.1mRNA_Ecto-sp13_S_contig5769.16191.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5769 4559..5389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5769.16191.1 ID=prot_Ecto-sp13_S_contig5769.16191.1|Name=mRNA_Ecto-sp13_S_contig5769.16191.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=277bp
TPACCTVAPHKGTTISNGTELCILEADLILMDGRHEQGLVAWANTFSSSF
PEGAAPAVSVADFTNGDALIPIARTILGDDHDDDDNDGQATASGWARVIS
YLLSADLIEKDVQVPTEEDTKRDMAVTCLEALLHHTCQDSCAGRATFIRQ
IMSLDTDVQSVLRHVVAGEEPSDEDGDACSSEAGSPSRDDGNGGASSSFP
GSPTASAAAHLSPDSGGSRGRRASITTSGSSYDSSRSDEEGDLGLKSWYS
PHPRSARRKSKVPTGGGTGERAARVGP
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