prot_Ecto-sp13_S_contig575.16164.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig575.16164.1
Unique Nameprot_Ecto-sp13_S_contig575.16164.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length302
Homology
BLAST of mRNA_Ecto-sp13_S_contig575.16164.1 vs. uniprot
Match: D8LCG2_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCG2_ECTSI)

HSP 1 Score: 566 bits (1460), Expect = 1.700e-203
Identity = 284/305 (93.11%), Postives = 291/305 (95.41%), Query Frame = 0
Query:    1 MEAELGTPGVAEAGGGDGMLGGNVIERAPREAAAA----AWSDTRPLSEQLPTYPATCFLAAVLVTVFLVMWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAHSGLLHLAFNVTSLWSCRRIEAELGFWGYLLASAHFVVLAEVFEKMFMHVLLRTGRVVDEVSCGYSGVVFAWIVVLSLRPDAPARVIGGFVFSGFASVVLNLVVVRILIRQSSFVGHLAGVWAGLLFSTGALDFAREDRYWSLGLAAWALAVLLGSLKATTTIPIPLIDYVDLSGRDDLGVGVAPLDWSNREWLEDWAAASA 301
            MEAELG PGVAEAGGGDGM+GGNVI+RAPREA       AWSD RPLSEQLPTYPATC L+AVLVTVFL MWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAH GLLHLAF+++SLWSCRRIE ELG WGYLLASAHFVVLAEVFEKMFMHVLLRTGRVVDEVSCGYSGVVFAWIVVLSLRPDAPARVIGGFVFSGFASVVLNLVVVRILIRQSSFVGHLAGVWAGLLFSTGALDFAREDRYWSLGLAAWALAVLLGSLKATTTIPIPLIDYVDLSGRDDLGVGVAPLDWSNREWLEDWAAA+A
Sbjct:    1 MEAELGAPGVAEAGGGDGMMGGNVIQRAPREAXXXXXXXAWSDARPLSEQLPTYPATCVLSAVLVTVFLAMWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAHGGLLHLAFSISSLWSCRRIETELGSWGYLLASAHFVVLAEVFEKMFMHVLLRTGRVVDEVSCGYSGVVFAWIVVLSLRPDAPARVIGGFVFSGFASVVLNLVVVRILIRQSSFVGHLAGVWAGLLFSTGALDFAREDRYWSLGLAAWALAVLLGSLKATTTIPIPLIDYVDLSGRDDLGVGVAPLDWSNREWLEDWAAANA 305          
BLAST of mRNA_Ecto-sp13_S_contig575.16164.1 vs. uniprot
Match: A0A4D9CU66_9STRA (Rhomboid domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU66_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.710e-42
Identity = 82/234 (35.04%), Postives = 131/234 (55.98%), Query Frame = 0
Query:   42 PLSEQLPTYPATCFLAAVLVTVFLVMWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAHSGLLHLAFNVTSLWSCRRIEAELGFWGYLLASAHFVVLAEVFEKMFMHVLL------RTGRVVDEVSCGYSGVVFAWIVVLSLRPDAPARVIGGFVFSGFASVVLNLVVVRILIRQSSFVGHLAGVWAGLLFSTGALDFAREDRYWSLGLAAWALAVLLGSLKATTTIPIPLIDY 269
            P  + L   PAT    AVLV ++  +W  RVSA  +  SY N++ ++EWWR +TAA +H  L H+ FNV +LW CR  E  LG W +++ S   VVL+++     ++         R+    +  S GYS V+FAW+ +LS        ++G        + V +L++ ++++R++S VGH +G+ AGL+ + G LD+     YW      W +A+L  SLKATT +P+P ++Y
Sbjct:    5 PFLQDLLLTPATAVTCAVLVVIWFFLWNHRVSADKVSFSYTNVVEKKEWWRCLTAAHSHLDLAHIGFNVIALWDCRSAELWLGHWRFIVQSLALVVLSKLIMLAVVYFASSCLPAPRSRAWQEGGSVGYSAVIFAWMTILSFYGPPTVSLLGLVEIPSLLAPVASLLITQLIVRRASLVGHASGIVAGLIAALGTLDWLSSP-YWGGCFLFWVVAMLAISLKATTGLPLPCLEY 237          
BLAST of mRNA_Ecto-sp13_S_contig575.16164.1 vs. uniprot
Match: W7TIX3_9STRA (Rhomboid protein 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIX3_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.690e-42
Identity = 86/249 (34.54%), Postives = 136/249 (54.62%), Query Frame = 0
Query:   42 PLSEQLPTYPATCFLAAVLVTVFLVMWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAHSGLLHLAFNVTSLWSCRRIEAELGFWGYLLASAHFVVLAEVFEKMFMHVLL------RTGRVVDEVSCGYSGVVFAWIVVLSLRPDAPARVIGGFVFSGFASVVLNLVVVRILIRQSSFVGHLAGVWAGLLFSTGALDFAREDRYWSLGLAAWALAVLLGSLKATTTIPIPLIDYVD---LSGRDDLGVG 281
            P  + L   PAT    AVLV ++  +W  RVSA  +  SY N++ ++EWWR +TAA +H  L H+ FNV +LW CR  E  LG W + + S   VVL+++     ++         R+    +  S GYS V+FAW+ +LS        ++G        + V +L++ ++++R++S VGH +G+ AGL+ + G LD+     YW      W +A+L  SLKATT +P+P ++Y     + G +  GVG
Sbjct:   95 PFLQDLLLTPATAVTCAVLVVIWFFLWNHRVSADRVAFSYTNVVEKKEWWRCLTAAHSHLDLAHIGFNVIALWDCRSAELWLGHWRFAVQSLALVVLSKLIMLAVVYFASSCLPAPRSRAWQEGGSVGYSAVIFAWMTILSFYGPPTVSLLGLVEIPSLLAPVASLLITQLIVRRASLVGHASGIVAGLIAALGTLDWLNSP-YWGGCFLFWVVAMLAISLKATTGLPLPCLEYAGWGAVGGEERAGVG 342          
BLAST of mRNA_Ecto-sp13_S_contig575.16164.1 vs. uniprot
Match: A0A7S2V9M1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9M1_9STRA)

HSP 1 Score: 152 bits (384), Expect = 8.120e-41
Identity = 81/239 (33.89%), Postives = 138/239 (57.74%), Query Frame = 0
Query:   42 PLSEQLPTYPATCFLAAVLVTVFLVMWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAHSGLLHLAFNVTSLWSCRRIEAELGFWGYLLASAHFVVLAEVFEKMFMHVLLRTGR------VVDEVSCGYSGVVFAWIVVLSLRPD--APARVIGGFVFSGFASVVLNLVVVRILIRQSSFVGHLAGVWAGLLFSTGALDFAREDRYWSLGLAAWALAVLLGSLKATTTIPIPLIDYVDL 272
            PL  Q+   P TC +    + +++     R+ A S+G SY  ++   E+WR++TAAV+H+   HL FNV S+W+ R +E ++G W YL  S   ++LA  +    +  ++ + R        D+VS GYS V+F  + VL+   +   P ++  G       + +  +++ +++ RQ+SF+GHL+G+ AG++ ++G LD+  +  YW     AW  AVLL SLKATT +P+P +DYV++
Sbjct:   30 PLISQIINSPMTCVVIMSCIAIYVNQRANRIGADSVGISYTRVVKGMEYWRILTAAVSHANFWHLLFNVYSVWNIRLLEWKIGGWEYLCHSMLILLLARTYHFTLLWRVISSTRNPVLQSYADQVSLGYSAVIFGLMTVLATTEENMGPYQLPLGLQVEAPLAPMAAMIITQLVYRQASFLGHLSGMLAGVMVASGLLDWCLQP-YWVAWGCAWGTAVLLVSLKATTNLPVPFVDYVNI 267          
BLAST of mRNA_Ecto-sp13_S_contig575.16164.1 vs. uniprot
Match: A0A8J9S0I8_9CHLO (Probable rhomboid-related protein 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S0I8_9CHLO)

HSP 1 Score: 122 bits (305), Expect = 2.220e-29
Identity = 75/240 (31.25%), Postives = 126/240 (52.50%), Query Frame = 0
Query:   51 PATCFLAAVLVTVFLVMWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAHSGLLHLAFNVTSLWSCRRIE-----AELGFWGYLLASAHFVVLAEVFEKMFMHVL---LRTGRVVDEVSCGYSGVVFAWIVVLSLRPDAPARVIGGFVFSGFASVVLNLVVVRILIRQSSFVGHLAGVWAGLLFSTGALDFAREDRYWSLGLAAWALAVLLGSLKATTTIPIPLIDYVDLSGRDDLGVGV 282
            PAT  ++ +L  V+  +    +  A +G +Y   + + E WR+VTA ++H  LLHL FNV++LWS   +E     A  G   YL  S   ++ + +   +F HVL   LR  + ++  + G+S V+F W+ +LS    A   V G      + +   +LV+  I+I ++SF+GHL+G+  G + ++G LD+     +W L L AW  A+L+  L  +  + +P +  V   G  D+  GV
Sbjct:   13 PATSVVSTLLAAVYFYITSHGIGYAEVGLNYEQAVQKLELWRIVTAQLSHIELLHLLFNVSTLWSLGVVEESGLGARSGTLYYLRISLVLLIFSGLVCLLFYHVLGVVLRREQFLNVTTVGFSAVIFGWMTILSRSGVASFSVFGLANIPMWLTPFASLVLTSIIIPRASFLGHLSGIVVGYMVASGVLDWLTL--WWLLSLTAWTAALLVFHLVRSGRLEVPWLRMVPSDGAGDIETGV 250          
BLAST of mRNA_Ecto-sp13_S_contig575.16164.1 vs. uniprot
Match: A0A0G4III9_PLABS (Rhomboid domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4III9_PLABS)

HSP 1 Score: 115 bits (289), Expect = 4.850e-27
Identity = 77/250 (30.80%), Postives = 129/250 (51.60%), Query Frame = 0
Query:   34 AAAWSDTRPLSEQLPTYPATCFLAAVLVTVFLVMWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAHSGLLHLAFNVTSLWSC-RRIEAELGFWGYLLASAHFVVLAEVFEK----MFMHVLLRTGRVVDEVSCGYSGVVFAWIVVLSLRPDAPARVIGGFVFSGFASV-VLNLVVVRILIRQSSFVGHLAGVWAGLLFSTGALD-FAREDRYWSLGLAAWALAVLLGSLKATTTIPIPLIDYVDLSGRD 276
            A  W D       L  +P T    AV   +++  W  R   A + SSYR +++ ++ WR +T+  +H  +LHLAFN++  WS  ++ E+++G   +   +  F+V++         + +H + + G   D+ S GYS V+FAW    S++         G V +    V +L L+  ++LI  +SFVGHL+G+ AGLLF    LD F+    Y+ L    W +  +  S+K TT +P+P +  +D +G D
Sbjct:    2 AGIWHD-------LVRWPLTSATVAVCFVLWVWHWNSRSDLARVASSYRRIVIEKQVWRCITSTYSHGSVLHLAFNMSMAWSQGQQFESQIGTVEFARVTTLFIVVSSCLSLGATWLLVHRMNQPGAA-DKQSVGYSAVLFAWYTAGSMQDPWTTLYFLGIVPTPRIVVPILALLFTQLLIANASFVGHLSGIVAGLLFG---LDLFSWFTTYFFLCSLTWIVIGMSWSVKTTTNLPVPFLVMLDNTGHD 240          
BLAST of mRNA_Ecto-sp13_S_contig575.16164.1 vs. uniprot
Match: I0Z371_COCSC (Rhomboid-domain-containing protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z371_COCSC)

HSP 1 Score: 114 bits (286), Expect = 1.210e-26
Identity = 76/246 (30.89%), Postives = 126/246 (51.22%), Query Frame = 0
Query:   46 QLPTYPATCFLAAVLVTVFLVMWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAHSGLLHLAFNVTSLWSCRRIE------AELGFWGYLLASAHFVVLAEVFEKMFMHVL---LRTGRVVDEVSCGYSGVVFAWIVVLSLRPDAPARVIGGFVFSGFASVVLNLVVVRILIRQSSFVGHLAGVWAGLLFSTGALDFAREDRYWSLGLAAWALAVLLGSLKATTTIPIPLIDYVDLSGRDDLGVGV 282
            Q+   PAT  ++ +L  V+L +    +  A +G +Y   + + E WRV+TA V+H  LLHL FN+++LWS   IE      A+ G   YL  S   ++ + +   +F HVL   LR  +     + GYS V+F W+ +LS    A   V G      + +   +LV+  I+I ++SF+GHL+G+  G + ++G  D+     +W   L AW+ A+L+  L     + +P +  +   G  D+  GV
Sbjct:    4 QVVERPATSLVSTLLTAVYLYITSHGIGYADVGLNYDQAVQKLELWRVLTAQVSHVELLHLLFNLSTLWSLGVIEESNGNGAKGGTRYYLQTSLVLLIFSGLVCLLFYHVLGVVLRREQYHTVTTVGYSAVIFGWMTILSRTGVASFSVFGLANIPMWLTPFASLVLTSIIIPRASFLGHLSGIVVGFMVASGVFDWLTL--WWLGSLLAWSGALLVFHLVRIERLEVPWLRMMPSEGAGDIETGV 247          
BLAST of mRNA_Ecto-sp13_S_contig575.16164.1 vs. uniprot
Match: A0A2P6V6P8_9CHLO (Rhomboid family n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V6P8_9CHLO)

HSP 1 Score: 112 bits (281), Expect = 8.870e-26
Identity = 77/227 (33.92%), Postives = 123/227 (54.19%), Query Frame = 0
Query:   51 PATCFLAAVLVTVFLVMWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAHSGLLHLAFNVTSLWSCRRIEAELGFW-GYLLASAHFV-VLAEVFEKMFMHVL---LRTGRVVDEVSCGYSGVVFAWIVVLSLRPDAPARVIGGFVFSGFASVVL------NLVVVRILIRQSSFVGHLAGVWAGLLFSTGALDFAREDRYWSLGLAAWALAVLLGSLKATT---TIP 263
            PAT  +A +L+ V+L++ +R +S A +G SY  ++  +E WR     VAH   +HLAFN+++LWS   ++   G   GY L +   + +L      +  HVL   L+  +  D  + GYS V+F W+ +L+ R      ++  F   G ASV +      +L++  +L+ ++SF+GHLAG+ AG   + G L +     YW++ L AWA A+L G   A T   TIP
Sbjct:   14 PATTAIALLLLAVYLLLHQRHLSYADVGLSYDRVVTHRELWRCAACQVAHLDFIHLAFNLSTLWSLGLVKRTSGLGPGYFLHTTVLLFLLCPAICVLLYHVLIVALKREQYRDVTAVGYSCVLFGWMTLLATRQPGGITMLPLF---GLASVPMWLTPWASLLITSLLVPKASFIGHLAGILAGYAAAFGLLSWLSP--YWTVSLVAWA-ALLTGHAAARTQQLTIP 234          
BLAST of mRNA_Ecto-sp13_S_contig575.16164.1 vs. uniprot
Match: A0A482R695_9EURY (Rhomboid family intramembrane serine protease (Fragment) n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A482R695_9EURY)

HSP 1 Score: 113 bits (283), Expect = 1.540e-25
Identity = 71/231 (30.74%), Postives = 116/231 (50.22%), Query Frame = 0
Query:   36 AWSDTRPLSEQLPTY----PATCFLAAVLVTVFLVMWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAHSGLLHLAFNVTSLWSCRRIEAELGFWGYLLASAHFVVLAEVFEKMFMHVLLR---TGRVVDEVSCGYSGVVFAWIVVLSL-RPDAPARVIGGFVFSGFASVVLNLVVVRILIRQSSFVGHLAGVWAGLLFSTGALDFAREDRYWSLGLAAWALAVLLGSLKA 258
            +WS     S  L T     P +  + A    ++ V+W  R   A +  SY  ++V ++ +R VTA   H G+LHL FN+TSL++   +EA  G + Y   +   +++AE+     +  L R       +++ + GYSG++F W  +++   P A    +G      + S   +L ++++L+  +SFVGHL+G+ AG L +  A  FA    YW   L AW     L SLKA
Sbjct:   30 SWSSIMASSSTLLTLLQAAPVSVSIGAACCVIWFVIWNWRFDIAPLAVSYNAVVVDRQLYRAVTACFVHGGILHLVFNMTSLYAISGVEAAAGSYFYTKTTLLLLLVAELVSIALVSTLARWWGMTSALEQRAVGYSGILFGWSAIIAKWNPTAQVAFMGLIPMPAWVSPFASLFLIQLLVPNASFVGHLSGIIAGFLIAFNA--FAWLTGYWFWTLVAWMSVACLLSLKA 258          
BLAST of mRNA_Ecto-sp13_S_contig575.16164.1 vs. uniprot
Match: E1Z8E6_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z8E6_CHLVA)

HSP 1 Score: 114 bits (284), Expect = 1.540e-24
Identity = 78/243 (32.10%), Postives = 127/243 (52.26%), Query Frame = 0
Query:   51 PATCFLAAVLVTVFLVMWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAHSGLLHLAFNVTSLWSCRRIEAELGFWGYLLASAHFVVLAEVFEKMFMHVLLRTGR---VVDEVSCGYSGVVFAWIVVLSLRPDAPARVIGGFVFSGFASVVL------NLVVVRILIRQSSFVGHLAGVWAGLLFSTGALDFAREDRYWSLGLAAWALAVLLGSLKATTTIPIPLIDYVDLSGRDDLGVGVAP 284
            PAT  LA +L   + ++  R +    +G SY  ++V +E WR   + +AH  L+HLAFN+++LWS   +E  LG   YL  +A   +L+     +  H+L+  G+     +  + GYS V+F W+ +++        ++  F   G AS+ L      +L++  +LI ++SFVGHLAG+ AG   + GA  F+  + +WSL L AWA    +G   A       +I Y+ L G    G+G +P
Sbjct:  458 PATSALALLLTVAYALIQWRHLGYPDVGLSYDRVVVHRELWRTAASQLAHIDLVHLAFNLSALWSIGLVERTLGTLHYLQHTALLFLLSPAICILIYHLLIVVGQREQYREVTAVGYSCVLFGWMSLMATSKPGGITMLPVF---GLASIPLWATPWASLLITSLLIPRASFVGHLAGMLAGYAVALGA--FSWLNPWWSLSLLAWAA---MGLSYAAARSRQLVILYIRLPGGAAFGLGGSP 692          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig575.16164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCG2_ECTSI1.700e-20393.11Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
A0A4D9CU66_9STRA1.710e-4235.04Rhomboid domain-containing protein n=1 Tax=Nannoch... [more]
W7TIX3_9STRA2.690e-4234.54Rhomboid protein 2 n=1 Tax=Nannochloropsis gaditan... [more]
A0A7S2V9M1_9STRA8.120e-4133.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8J9S0I8_9CHLO2.220e-2931.25Probable rhomboid-related protein 4 n=1 Tax=Coccom... [more]
A0A0G4III9_PLABS4.850e-2730.80Rhomboid domain-containing protein n=1 Tax=Plasmod... [more]
I0Z371_COCSC1.210e-2630.89Rhomboid-domain-containing protein (Fragment) n=1 ... [more]
A0A2P6V6P8_9CHLO8.870e-2633.92Rhomboid family n=1 Tax=Micractinium conductrix Ta... [more]
A0A482R695_9EURY1.540e-2530.74Rhomboid family intramembrane serine protease (Fra... [more]
E1Z8E6_CHLVA1.540e-2432.10Uncharacterized protein n=1 Tax=Chlorella variabil... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 87..230
e-value: 8.8E-17
score: 61.5
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 46..236
e-value: 2.1E-18
score: 68.5
NoneNo IPR availablePANTHERPTHR43731:SF20RHOMBOID-LIKE PROTEIN 13coord: 41..273
NoneNo IPR availablePANTHERPTHR43731FAMILY NOT NAMEDcoord: 41..273
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 239..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..142
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 257..301
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..233
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 234..238
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 180..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..179
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..212
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..69
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 47..230
NoneNo IPR availableTMHMMTMhelixcoord: 156..175
NoneNo IPR availableTMHMMTMhelixcoord: 124..143
NoneNo IPR availableTMHMMTMhelixcoord: 244..266
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 212..234
NoneNo IPR availableTMHMMTMhelixcoord: 185..207
NoneNo IPR availableTMHMMTMhelixcoord: 90..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig575contigEcto-sp13_S_contig575:14163..20864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig575.16164.1mRNA_Ecto-sp13_S_contig575.16164.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig575 14163..21653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig575.16164.1 ID=prot_Ecto-sp13_S_contig575.16164.1|Name=mRNA_Ecto-sp13_S_contig575.16164.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
MEAELGTPGVAEAGGGDGMLGGNVIERAPREAAAAAWSDTRPLSEQLPTY
PATCFLAAVLVTVFLVMWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAH
SGLLHLAFNVTSLWSCRRIEAELGFWGYLLASAHFVVLAEVFEKMFMHVL
LRTGRVVDEVSCGYSGVVFAWIVVLSLRPDAPARVIGGFVFSGFASVVLN
LVVVRILIRQSSFVGHLAGVWAGLLFSTGALDFAREDRYWSLGLAAWALA
VLLGSLKATTTIPIPLIDYVDLSGRDDLGVGVAPLDWSNREWLEDWAAAS
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
IPR035952Rhomboid-like_sf