prot_Ecto-sp13_S_contig5749.16160.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5749.16160.1
Unique Nameprot_Ecto-sp13_S_contig5749.16160.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length456
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5749.16160.1 vs. uniprot
Match: D7G5B2_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B2_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 6.920e-76
Identity = 212/217 (97.70%), Postives = 216/217 (99.54%), Query Frame = 0 
Query:    1 MKRGKRCFIHSCLAPAPFASPLQPDVHACEVHKQRDFVNMRNKRCLEPGCYRNPHYGVSRLVDPNSKAQYCTKXXXXXXXXXXXXXXXXXXXXXXPRFSLPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRVVIPGSAKKRGKFCEIHCDVNELVDKDVSSDGTASDKKRGRAWMTGI 217
            MKRGKRCFI SCLAPAPFASPLQPDVHACEVHK+RDFVNMRNKRCLEPGCYRNPHYGVSRL+DPNSKAQYCTKXXXXXXXXXXXXXXXXXXXXXXPRFSLPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRVVIPGSAKKRGKFCEIHCDVNELVDKDVS+DGTASDKKRGRAWMTG+
Sbjct:    1 MKRGKRCFIQSCLAPAPFASPLQPDVHACEVHKKRDFVNMRNKRCLEPGCYRNPHYGVSRLIDPNSKAQYCTKXXXXXXXXXXXXXXXXXXXXXXPRFSLPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRVVIPGSAKKRGKFCEIHCDVNELVDKDVSTDGTASDKKRGRAWMTGM 217
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5749.16160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5B2_ECTSI6.920e-7697.70EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..455
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5749contigEcto-sp13_S_contig5749:2862..6535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5749.16160.1mRNA_Ecto-sp13_S_contig5749.16160.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5749 2862..6535 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5749.16160.1 ID=prot_Ecto-sp13_S_contig5749.16160.1|Name=mRNA_Ecto-sp13_S_contig5749.16160.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=456bp
MKRGKRCFIHSCLAPAPFASPLQPDVHACEVHKQRDFVNMRNKRCLEPGC
YRNPHYGVSRLVDPNSKAQYCTKHKAPGMQNVNGGRCAGPDCSKQPRFSL
PGEKGKYCSKHRKEGMVDVLYTPCAAEGCRKHPHFGHVEGGPRYCAQHRA
EGMVDVKHRRCAVKSCRKDRVVIPGSAKKRGKFCEIHCDVNELVDKDVSS
DGTASDKKRGRAWMTGIEDDREYMSSGSSQRGSSVGDLAGNTPYDYSSSR
SASIPSIHEAAQGLAHLAMLASRESALSVSGEAAGTSLSRGNGHVPGRAP
YQQAGQPESTHRGTARPIAGRGPSHPNTELDRHAKSRDTRAFFYPAARPG
SERDPYPLFKRERLQSNDPLEPGRPRVSPDFRGSTSASMASGPAAAAVPP
FRLRYFDPKPNSSMYSAYPSPWDFHREGERARWADGDSVRAPVPMRAWDS
HPSAT*
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