prot_Ecto-sp13_S_contig5743.16152.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5743.16152.1
Unique Nameprot_Ecto-sp13_S_contig5743.16152.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length508
Homology
BLAST of mRNA_Ecto-sp13_S_contig5743.16152.1 vs. uniprot
Match: D7FS68_ECTSI (RNA-splicing ligase RtcB homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS68_ECTSI)

HSP 1 Score: 874 bits (2259), Expect = 0.000e+0
Identity = 456/516 (88.37%), Postives = 464/516 (89.92%), Query Frame = 0
Query:    1 MKRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELRQQSGGNGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTQXXXXXXXXXXXXXXGDGHRLVHQRRLRLGRGQGALRGVR--EDAAGGSYKGKV-------SRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 507
            MKRSYEEEKSFITRE+GQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELRQQSGG GGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPGGVGFDINCGVRLVRTNLTL+DVLPVKEELTQSLFDHIPVGVGT+                         L +G       G    ED       G++       +RRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKI+SQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG
Sbjct:    1 MKRSYEEEKSFITRENGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELRQQSGGKGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPGGVGFDINCGVRLVRTNLTLDDVLPVKEELTQSLFDHIPVGVGTKGMVPITAADLNDV------------LEMGIDWSIREGYAWVEDKEHCEEYGRMLQADPTKARRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKINSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 504          
BLAST of mRNA_Ecto-sp13_S_contig5743.16152.1 vs. uniprot
Match: A0A7S1GE03_9STRA (RNA-splicing ligase RtcB homolog n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GE03_9STRA)

HSP 1 Score: 703 bits (1814), Expect = 1.460e-250
Identity = 360/519 (69.36%), Postives = 414/519 (79.77%), Query Frame = 0
Query:    3 RSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELRQQSGGNGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTQXXXXXXXXXXXXXXGDGHRLVHQRRLRLGRGQGALRGVREDAAGGSYK--------------GKVSRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 507
            R+YEEE +++ RE  +RF +D GFVPNM+VPG FY NDRLE L F+EL+Q S  +G GGFLPA+KQ+ANVAALPG+VK SI LPDVHSGYGFA+GNVAAFDM DP +VVSPGGVGFDINCGVRLVRTNLT  D+LPVKE+LTQSLFDHIPVGVG++                       + L  G   G    +RE  A    K               KVS+RAK RGLPQLGTLGAGNHYAEIQ+V+E+YD  AA +MGI++V QVC+MIHSGSRGLGHQVATDAL  ME AM RD I++NDRQLACA+I+S EGQ+YL  MAAAANYAWVNR+ MTFLTR+AF+K F  T ++LDMHVVYDVSHNIAKVE+HIVDG L+ LLVHRKG+TRAFPPHHPLIPVDYQFTGQPV++GGTMGTCSYVLTGT+KGM ETFGSTCHGAGRA SR +SR+TLDY  VL  LE+KGISIRVASPKLVMEEAPESYKDVT VV+TCH AG+S + +KLRP+AV+KG
Sbjct:   10 RTYEEECAYVKRETTERFGVDIGFVPNMRVPGVFYVNDRLESLMFDELKQFSTASGVGGFLPAMKQLANVAALPGIVKRSIALPDVHSGYGFAIGNVAAFDMNDPTSVVSPGGVGFDINCGVRLVRTNLTEADLLPVKEKLTQSLFDHIPVGVGSKGIIP----------------TTAKDLEAGLEMGMDWSLREGYAWAEDKEHCEEYGRMLAADPSKVSKRAKKRGLPQLGTLGAGNHYAEIQIVDEIYDTHAAGRMGIEQVGQVCVMIHSGSRGLGHQVATDALNEMEKAMVRDRIEVNDRQLACARITSTEGQNYLKSMAAAANYAWVNRSSMTFLTRQAFAKMFNSTPDDLDMHVVYDVSHNIAKVEEHIVDGRLRKLLVHRKGSTRAFPPHHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTEKGMAETFGSTCHGAGRAHSRAKSRRTLDYHEVLRKLEEKGISIRVASPKLVMEEAPESYKDVTAVVDTCHAAGISKKVIKLRPVAVVKG 512          
BLAST of mRNA_Ecto-sp13_S_contig5743.16152.1 vs. uniprot
Match: K8FAV9_9CHLO (RNA-splicing ligase RtcB homolog n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8FAV9_9CHLO)

HSP 1 Score: 690 bits (1781), Expect = 2.920e-245
Identity = 362/519 (69.75%), Postives = 409/519 (78.81%), Query Frame = 0
Query:    3 RSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELRQQSGGNGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTQXXXXXXXXXXXXXXGDGHRLVHQRRLRLGRGQGALRGVREDAAGGSYK--------------GKVSRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 507
            R+YEEE S+I   D   + +  GFV NM+VPG FY N  L  LTFEEL+Q +     GGFLPAVKQIANVA+LPG+V  SI LPDVHSGYGFA+GNVAAFD+ DP AVVSPGGVGFDINCGVRLVRTNLT  +V P+KEE+ Q+LFDHIPVGVG                G G   V  + L      G    VRE  A    K               KVS+RAK RGLPQ+GTLGAGNHYAEIQVV+E+YD+ AAKKMGIDK+ QV +MIHSGSRGLGHQVATDALV ME AMA+D +++NDRQLACA+I+SQEG+DYLA MA AANYAWVNR  MTFL R+AF+K F KTAE+LDMHVVYDVSHNIAK+E+HIVDG+LKTLLVHRKG+TRAFPPHHPLIPVDYQ+TGQPV+VGGTMGTCSYVLTGT+KGM ETFGSTCHGAGRA+SR+ SR+ L YE VL  L+ KGISIRVASPKLVMEEAPESYKDVTEVV+TCHDAG+S + VKLRPIAVIKG
Sbjct:   28 RTYEEECSYIENRDPTSYVVKIGFVANMRVPGIFYVNKFLAGLTFEELKQHAERGRAGGFLPAVKQIANVASLPGIVGRSIALPDVHSGYGFAIGNVAAFDVNDPKAVVSPGGVGFDINCGVRLVRTNLTEAEVQPLKEEVAQALFDHIPVGVG----------------GKGIIPVDAKTLDTALEMGIDWCVREGYAWIEDKERCEENGRMLNADPSKVSQRAKKRGLPQMGTLGAGNHYAEIQVVDEIYDQFAAKKMGIDKIGQVVVMIHSGSRGLGHQVATDALVEMEKAMAKDGLELNDRQLACARINSQEGKDYLAAMACAANYAWVNRQSMTFLCRQAFAKTFNKTAEQLDMHVVYDVSHNIAKIEEHIVDGELKTLLVHRKGSTRAFPPHHPLIPVDYQYTGQPVLVGGTMGTCSYVLTGTEKGMHETFGSTCHGAGRARSRHNSRQKLSYEQVLENLKTKGISIRVASPKLVMEEAPESYKDVTEVVDTCHDAGISKKCVKLRPIAVIKG 530          
BLAST of mRNA_Ecto-sp13_S_contig5743.16152.1 vs. uniprot
Match: A0A2I4D653_9TELE (RNA-splicing ligase RtcB homolog n=28 Tax=Gnathostomata TaxID=7776 RepID=A0A2I4D653_9TELE)

HSP 1 Score: 689 bits (1777), Expect = 4.780e-245
Identity = 354/521 (67.95%), Postives = 405/521 (77.74%), Query Frame = 0
Query:    1 MKRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELRQQSGGNGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTQXXXXXXXXXXXXXXGDGHRLVHQRRLRLGRGQGALRGVREDAAGGSYK--------------GKVSRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 507
            M RSY +E  F+ + +   +RI  GFVPNMKV G FY ND LEKL FEELR    G G GGFLPA+KQI NVAALPG+V  SIGLPDVHSGYGFA+GN+AAFDM DPDAVVSPGGVGFDINCGVRL+RTNL   DV PVKE+L QSLFDHIPVGVG++                    +  + L      G    +RE  A    K               KVS +AK RGLPQLGTLGAGNHYAEIQVV+++YD+ AAKKMGID   QVC+MIHSGSRGLGHQVATDALV ME AM RD I +NDRQLACA+I+SQEGQDYL GMAAA NYAWVNR+ MTFLTR+AFSK FG T ++LDMH++YDVSHNIAKVE+H+VDG  +TLLVHRKG+TRAFPPHHPLIPVDYQ TGQPV++GGTMGTCSYVLTGT++GM ETFG+TCHGAGRA SR +SR+ LD++ VL  L   GI+IRVASPKLVMEEAPESYK+VT+VVNTCHDAG+S +A+KLRP+AVIKG
Sbjct:    1 MSRSYNDELQFLEKLNSNCWRIKNGFVPNMKVEGIFYVNDSLEKLMFEELRNACRGGGVGGFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPDAVVSPGGVGFDINCGVRLLRTNLDERDVQPVKEQLAQSLFDHIPVGVGSKGVIP----------------MGAKDLEEALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADPNKVSSKAKKRGLPQLGTLGAGNHYAEIQVVDDIYDDYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKITVNDRQLACARITSQEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFSKVFGTTPDDLDMHIIYDVSHNIAKVEEHMVDGKQRTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISKKAIKLRPVAVIKG 505          
BLAST of mRNA_Ecto-sp13_S_contig5743.16152.1 vs. uniprot
Match: W7TEQ9_9STRA (RNA-splicing ligase RtcB homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEQ9_9STRA)

HSP 1 Score: 683 bits (1763), Expect = 7.700e-243
Identity = 354/515 (68.74%), Postives = 408/515 (79.22%), Query Frame = 0
Query:    3 RSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELRQQSGGNGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTQXXXXXXXXXXXXXXGDGHRLVHQRRLRLGRGQGALRGVR--EDAAGGSYKG--------KVSRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 507
            R++EEE  F+ RE   RFRID G VPNMKV G FY N +LE+L F EL+Q +   G GGFLPAVKQIANVAALPG+V  SIGLPDVHSGYGFA+GNVAAF +AD +A+VSPGGVGFDINCGVRL+RTNLT EDV   +E+LTQSLFDHIPVGVG++                      +  L +G       G    ED       G        KV  RAK RGLPQLGTLGAGNHYAEIQVVEE++D +AA +MGID++ QVC+MIHSGSRGLGHQVATDALV ME AMARD I  NDRQLACA+I S EGQ+YLA MAAAAN+AWVNR+ MTFLTR+AF+K F  T ++LDMHV+YDVSHNIAKVE+H+  G  KTLLVHRKG+TRAFPP+HPLIPVDYQFTGQPV++GGTMGTCSYVLTGT KG++ETFGSTCHGAGRA+SRN+SRKTL+Y  VL  LE+KGISIRVASPKLVMEEAPESYKDVT+VV+TCH+AG+S +A+KLRPIAV+KG
Sbjct:    8 RTFEEEMGFLHRETPTRFRIDKGCVPNMKVEGAFYVNTKLEELMFAELKQHTTAGGVGGFLPAVKQIANVAALPGIVGRSIGLPDVHSGYGFAIGNVAAFAVADTEAIVSPGGVGFDINCGVRLIRTNLTEEDVRGKREKLTQSLFDHIPVGVGSKGVIPTSAADL------------EAALEMGMDWSLREGYAWAEDNEHCEENGRMRQADPTKVGMRAKKRGLPQLGTLGAGNHYAEIQVVEEIHDPRAAARMGIDQIGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGILTNDRQLACARIQSPEGQNYLAAMAAAANFAWVNRSSMTFLTRQAFAKMFEATPDDLDMHVIYDVSHNIAKVEEHMYQGRPKTLLVHRKGSTRAFPPNHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTDKGLEETFGSTCHGAGRAQSRNKSRKTLEYTEVLAALEEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHEAGISRKAIKLRPIAVVKG 510          
BLAST of mRNA_Ecto-sp13_S_contig5743.16152.1 vs. uniprot
Match: A0A7S1AJX4_NOCSC (RNA-splicing ligase RtcB homolog n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AJX4_NOCSC)

HSP 1 Score: 683 bits (1762), Expect = 1.090e-242
Identity = 358/517 (69.25%), Postives = 403/517 (77.95%), Query Frame = 0
Query:    2 KRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELRQQSG-GNGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTQXXXXXXXXXXXXXXGDGHRLVHQRRLRLGRGQGALRGVR--EDAAGGSYKG--------KVSRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 507
            KRSYE+EK+++ RE    + I  GFVPNM VPG FY N  LE+L F+E+R  S   +  GGFLPA+KQI NVAALPG+VK SIGLPD+HSGYGFA+GNVAAF+MADP AVVSPGGVGFDINCGVRL+RTNL  EDV+  KE+L QSLFDHIPVGVG+Q                      +  L+LG       G    ED       G        KVS+RAK RGLPQLGTLGAGNHYAEIQVVEE+YDE  AKKMGID+  QVC+MIHSGSRGLGHQVATDALV ME AMARD I  NDRQLACA+I SQEGQ+Y+A M+AAANYAWVNR+ MTFLTR+AF+K F  + E+LDMH++YDVSHNIAKVEQH+VDG    LLVHRKG+TRAFPPHHPLIPVDYQ TGQPVIVGGTMGTCSYVLTGT+KGM ETFGSTCHGAGRA SRN+SR  LDY  VL  LE  GISIRVASPKL+MEEAPESYKDVT+VV TCH AG+S +AVKL+PIAV+KG
Sbjct:    6 KRSYEQEKNYLQRESSSMYTIKEGFVPNMTVPGKFYVNSALERLVFDEVRSYSKQSDTTGGFLPALKQIGNVAALPGIVKYSIGLPDIHSGYGFAIGNVAAFNMADPTAVVSPGGVGFDINCGVRLLRTNLMYEDVMDKKEQLAQSLFDHIPVGVGSQGIIPTKAQDM------------EEALQLGIDWSLREGYAWPEDKEHCEEYGRMLAADPNKVSQRAKKRGLPQLGTLGAGNHYAEIQVVEEIYDEFVAKKMGIDQKGQVCVMIHSGSRGLGHQVATDALVEMERAMARDGIRTNDRQLACARIQSQEGQNYIAAMSAAANYAWVNRSSMTFLTRQAFAKVFNLSPEDLDMHLIYDVSHNIAKVEQHMVDGQNMELLVHRKGSTRAFPPHHPLIPVDYQLTGQPVIVGGTMGTCSYVLTGTEKGMRETFGSTCHGAGRALSRNKSRNNLDYSEVLKRLEDLGISIRVASPKLIMEEAPESYKDVTQVVETCHQAGISKKAVKLKPIAVVKG 510          
BLAST of mRNA_Ecto-sp13_S_contig5743.16152.1 vs. uniprot
Match: A0A7S3BHP6_9VIRI (RNA-splicing ligase RtcB homolog n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7S3BHP6_9VIRI)

HSP 1 Score: 683 bits (1763), Expect = 1.380e-242
Identity = 354/523 (67.69%), Postives = 409/523 (78.20%), Query Frame = 0
Query:    3 RSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELR----QQSGGNGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTQXXXXXXXXXXXXXXGDGHRLVHQRRLRLGRGQGALRGVREDAAGGSYK--------------GKVSRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 507
            RSY+EE +++ R D QR+RI  GFVPNM V G FY N++L+ L   EL     +  GG    GFLPAVKQIANVAALPGVV  S+GLPDVHSGYGFA+GNVAAFDM DP+A+VSPGGVGFDINCGVRL+RTNLT  DVLP+KEEL QSLFDHIPVGVG+Q              GD + ++           G    VRE  A    K               KVS RAK RGLPQ+GTLGAGNHYAE+QVV+E++DE+AA KMGI+ V QV +MIHSGSRGLGHQVATD+L  ME AMARD I++NDRQLACA+I S+EGQDYL  MAAAANYAWVNR+ MTFL R+AF+K F KT +ELDMHV+YDVSHNIAK+E+H+V+G+LK LLVHRKG+TRAFPPHHPLIPVDYQ TGQPV++GGTMGTCSYVLTGT++GM ETFGSTCHGAGRA+SRN+SR  LDY+ VL  L+ KGISIRVASPKLVMEEAPESYKDV +VV TCH AG+S +AVKLRPIAV+KG
Sbjct:   20 RSYDEEIAYLERVDDQRWRIKAGFVPNMNVDGMFYVNEKLQGLALGELEVACERAKGGXXXXGFLPAVKQIANVAALPGVVGHSVGLPDVHSGYGFAIGNVAAFDMDDPEAIVSPGGVGFDINCGVRLIRTNLTEADVLPIKEELAQSLFDHIPVGVGSQGIIPTTA-------GDLNEVLEM---------GMDWSVREGFAWVEDKEHCEEYGRMLTADPNKVSTRAKKRGLPQMGTLGAGNHYAEVQVVDEIFDERAASKMGINSVGQVVVMIHSGSRGLGHQVATDSLTAMERAMARDGIEVNDRQLACARIGSKEGQDYLQAMAAAANYAWVNRSSMTFLVRQAFAKAFKKTPDELDMHVIYDVSHNIAKMEEHVVNGELKRLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMRETFGSTCHGAGRAQSRNKSRHNLDYQQVLDALKAKGISIRVASPKLVMEEAPESYKDVCQVVETCHMAGISKKAVKLRPIAVVKG 526          
BLAST of mRNA_Ecto-sp13_S_contig5743.16152.1 vs. uniprot
Match: A0A812VVI5_SYMPI (RNA-splicing ligase RtcB homolog n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812VVI5_SYMPI)

HSP 1 Score: 682 bits (1761), Expect = 1.500e-242
Identity = 357/510 (70.00%), Postives = 400/510 (78.43%), Query Frame = 0
Query:    1 MKRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELRQQSG-GNGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTQXXXXXXXXXXXXXXGDGHRLVHQRRLRLGRGQGALRGVREDAAG--GSYKGKVSRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 507
            +KRS+ +E  F+ RED   + I PGFV  M VPG FY ND+LE+L  +ELR  S   +  GGFLPAVKQI NVAALPG+VK SIGLPD+HSGYGFA+GNVAAFDM  PDAVVSPGGVGFDINCGVRLVRTNL   DV PVKE L QSLFDHIPVGVG+                +  +L     LR G      +   E+      +  GKVS RAK RGLPQLGTLGAGNHYAEIQVV+E+YDE  AKKMGID+  QVC+MIHSGSRGLGHQVATDALV ME AM RDNI  NDRQLACA+I S EGQ+YL GM+AAANYAWVNR+ MTFLTR+AF+K F ++ E+LDMHV+YDVSHNIAKVE+H VDG  K LLVHRKG+TRAFPPHHPLIPVDYQ TGQPVIVGGTMGTCSYVLTGT KGM ETFGSTCHGAGRA SRN+SR  LDY  VL  LE  GISIRVASPKL+MEEAPESYKDVT+VV TCHDAG+S +A+KL+P+AV+KG
Sbjct:    4 IKRSFNDEMGFLKREDSTCYSIRPGFVTGMNVPGKFYVNDQLERLMIDELRSFSRQSHNAGGFLPAVKQIGNVAALPGIVKYSIGLPDIHSGYGFAIGNVAAFDMGLPDAVVSPGGVGFDINCGVRLVRTNLLYSDVQPVKETLAQSLFDHIPVGVGSMGIIPTKEQDLE----EALQLGIDFSLREGYAWPEDKEHCEEYGRMLNADPGKVSSRAKKRGLPQLGTLGAGNHYAEIQVVDEIYDEFVAKKMGIDQKGQVCVMIHSGSRGLGHQVATDALVDMERAMTRDNIRTNDRQLACARIHSDEGQNYLKGMSAAANYAWVNRSSMTFLTRQAFAKVFNQSPEDLDMHVIYDVSHNIAKVEEHFVDGQCKQLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVIVGGTMGTCSYVLTGTDKGMRETFGSTCHGAGRALSRNKSRNNLDYGDVLKRLEDMGISIRVASPKLIMEEAPESYKDVTQVVQTCHDAGISKKAIKLKPVAVVKG 509          
BLAST of mRNA_Ecto-sp13_S_contig5743.16152.1 vs. uniprot
Match: A0A315VIM7_GAMAF (RNA-splicing ligase RtcB homolog n=3 Tax=Cyprinodontiformes TaxID=28738 RepID=A0A315VIM7_GAMAF)

HSP 1 Score: 687 bits (1772), Expect = 6.400e-242
Identity = 355/521 (68.14%), Postives = 404/521 (77.54%), Query Frame = 0
Query:    1 MKRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELRQQSGGNGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTQXXXXXXXXXXXXXXGDGHRLVHQRRLRLGRGQGALRGVREDAAGGSYK--------------GKVSRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 507
            M RSY +E  F+ +     +RI  GFVPNM+V G FY ND LEKL FEELR    G G GGFLPA+KQI NVAALPG+V  SIGLPDVHSGYGFA+GN+AAFDM DP+AVVSPGGVGFDINCGVRL+RTNL   DV PVKE+L QSLFDHIPVGVG++                    +  + L      G    +RE  A    K               KVS +AK RGLPQLGTLGAGNHYAEIQVV+E+Y+E AAKKMGID   QVC+MIHSGSRGLGHQVATDALV ME AM RD I +NDRQLACA+I+SQEGQDYL GMAAA NYAWVNR+ MTFLTR+AFSK FG T ++LDMHV+YDVSHNIAKVE+H+VDG  +TLLVHRKG+TRAFPPHHPLIPVDYQ TGQPV++GGTMGTCSYVLTGT++GM ETFG+TCHGAGRA SR +SR+ LD++ VL  L   GI+IRVASPKLVMEEAPESYK+VT+VVNTCHDAG+S +A+KLRPIAVIKG
Sbjct:  154 MSRSYNDELQFLEKTGSTSWRIKKGFVPNMQVEGVFYVNDSLEKLIFEELRNACRGGGVGGFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPNAVVSPGGVGFDINCGVRLLRTNLDERDVQPVKEQLAQSLFDHIPVGVGSKGVIP----------------MGAKDLEEALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADPNKVSSKAKKRGLPQLGTLGAGNHYAEIQVVDEIYNEYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKITVNDRQLACARITSQEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFSKVFGTTPDDLDMHVIYDVSHNIAKVEEHMVDGKQRTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMAETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISKKAIKLRPIAVIKG 658          
BLAST of mRNA_Ecto-sp13_S_contig5743.16152.1 vs. uniprot
Match: A0A7S4RZI4_9DINO (RNA-splicing ligase RtcB homolog n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RZI4_9DINO)

HSP 1 Score: 681 bits (1758), Expect = 8.820e-242
Identity = 361/517 (69.83%), Postives = 400/517 (77.37%), Query Frame = 0
Query:    2 KRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEELRQQSGGNGG-GGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVAAFDMADPDAVVSPGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDHIPVGVGTQXXXXXXXXXXXXXXGDGHRLVHQRRLRLGRGQGALRGVR--EDAAGGSYKG--------KVSRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGIDKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKISSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 507
            KR+YEEE S++TRE    F I  GFVP M VPG FY N  LE L  EEL+  S  +   GGFLPAVKQIANVAALPG+VK S+G+PDVHSGYGFA+GN AAFDM DP AVVSPGGVGFDINCGVRL+RTNL   DV PVKE L QSLFDHIPVGVG+Q                         L+LG       G    ED       G        KVS RAK RGLPQ+GTLGAGNHYAEIQVVEE+YDE  AKKMGID+ NQVC+MIHSGSRGLGHQVATDALV ME AMARD+I +NDRQLACA+I SQEGQ+YLA MAAAANYAWVNR+ MTFLTR+AFSK F ++ E+LDM ++YDVSHNIAK+E+H+VDG    LLVHRKGATRAFPPHHPLIPVDYQ TGQPVIVGGTMGTCSYVLTGT  GM +TFGSTCHGAGRA SRN+SR  LDY+ VLG LE+KGISIRVASPKLVMEEAPESYKDV +V +TCH AG+S +AVKLRPIAV+KG
Sbjct:   25 KRTYEEEMSYLTRETDSMFSIKTGFVPGMNVPGKFYVNSALETLMTEELKSFSRQSQNVGGFLPAVKQIANVAALPGIVKHSVGMPDVHSGYGFAIGNAAAFDMNDPQAVVSPGGVGFDINCGVRLLRTNLLFSDVEPVKERLAQSLFDHIPVGVGSQGIIPTKNSDLEEV------------LQLGVDWSLREGYAWPEDKEHCEEFGRMLNADPSKVSARAKKRGLPQMGTLGAGNHYAEIQVVEEIYDEFVAKKMGIDQKNQVCVMIHSGSRGLGHQVATDALVEMERAMARDDIQVNDRQLACARIQSQEGQNYLAAMAAAANYAWVNRSSMTFLTRQAFSKVFNQSPEDLDMFMIYDVSHNIAKIEEHMVDGKEMQLLVHRKGATRAFPPHHPLIPVDYQLTGQPVIVGGTMGTCSYVLTGTTVGMRDTFGSTCHGAGRALSRNKSRNNLDYKDVLGRLEEKGISIRVASPKLVMEEAPESYKDVIQVADTCHAAGISKKAVKLRPIAVVKG 529          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5743.16152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS68_ECTSI0.000e+088.37RNA-splicing ligase RtcB homolog n=2 Tax=Ectocarpu... [more]
A0A7S1GE03_9STRA1.460e-25069.36RNA-splicing ligase RtcB homolog n=1 Tax=Bicosoeci... [more]
K8FAV9_9CHLO2.920e-24569.75RNA-splicing ligase RtcB homolog n=1 Tax=Bathycocc... [more]
A0A2I4D653_9TELE4.780e-24567.95RNA-splicing ligase RtcB homolog n=28 Tax=Gnathost... [more]
W7TEQ9_9STRA7.700e-24368.74RNA-splicing ligase RtcB homolog n=2 Tax=Monodopsi... [more]
A0A7S1AJX4_NOCSC1.090e-24269.25RNA-splicing ligase RtcB homolog n=1 Tax=Noctiluca... [more]
A0A7S3BHP6_9VIRI1.380e-24267.69RNA-splicing ligase RtcB homolog n=3 Tax=Eukaryota... [more]
A0A812VVI5_SYMPI1.500e-24270.00RNA-splicing ligase RtcB homolog n=1 Tax=Symbiodin... [more]
A0A315VIM7_GAMAF6.400e-24268.14RNA-splicing ligase RtcB homolog n=3 Tax=Cyprinodo... [more]
A0A7S4RZI4_9DINO8.820e-24269.83RNA-splicing ligase RtcB homolog n=1 Tax=Alexandri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036025tRNA-splicing ligase RtcB-like superfamilyGENE3D3.90.1860.10coord: 10..507
e-value: 4.6E-173
score: 578.6
IPR036025tRNA-splicing ligase RtcB-like superfamilySUPERFAMILY103365Hypothetical protein PH1602coord: 19..507
IPR001233tRNA-splicing ligase, RtcBPFAMPF01139RtcBcoord: 68..507
e-value: 5.9E-134
score: 447.3
IPR001233tRNA-splicing ligase, RtcBPANTHERPTHR11118UNCHARACTERIZEDcoord: 11..507
IPR027513tRNA-splicing ligase RtcB homologue, eukaryoticHAMAPMF_03144RtcB_eukcoord: 1..507
score: 56.201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5743contigEcto-sp13_S_contig5743:482..7592 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5743.16152.1mRNA_Ecto-sp13_S_contig5743.16152.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5743 215..7656 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5743.16152.1 ID=prot_Ecto-sp13_S_contig5743.16152.1|Name=mRNA_Ecto-sp13_S_contig5743.16152.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=508bp
MKRSYEEEKSFITREDGQRFRIDPGFVPNMKVPGYFYANDRLEKLTFEEL
RQQSGGNGGGGFLPAVKQIANVAALPGVVKGSIGLPDVHSGYGFAVGNVA
AFDMADPDAVVSPGGVGFDINCGVRLVRTNLTLEDVLPVKEELTQSLFDH
IPVGVGTQXXXXXXXXXXXXXXGDGHRLVHQRRLRLGRGQGALRGVREDA
AGGSYKGKVSRRAKIRGLPQLGTLGAGNHYAEIQVVEEVYDEQAAKKMGI
DKVNQVCIMIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKI
SSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVV
YDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQP
VIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAV
LGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLR
PIAVIKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036025RtcB-like_sf
IPR001233RtcB
IPR027513RtcB_euk