prot_Ecto-sp13_S_contig10134.161.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10134.161.1
Unique Nameprot_Ecto-sp13_S_contig10134.161.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length195
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10134.161.1 vs. uniprot
Match: A0A6J4USL2_9CHLR (Urease alpha subunit (Fragment) n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4USL2_9CHLR)

HSP 1 Score: 94.0 bits (232), Expect = 6.600e-19
Identity = 75/194 (38.66%), Postives = 86/194 (44.33%), Query Frame = 0 
Query:    1 GDRIRTDDPLGRRHGTRHGDESDHLHPAPLSHEDDAPIHGRYPDELRLHGQGEHLQAGGAQRDRGGRCGGPQAARGLGHHPRRDRLLPHDRGGNGHSGHDSHRHAKRVVQPGGLRGCLQGPHHPHLPQRGGGRGARARHHRRLRGAECHPVLHEPDQTVYDQHHRRAPGHADGVSPPGQGGTRRRSLRREPYQG 194
            GDR+   D   RR     GDE D LH   +    DAP   R                 G      GR    +AARGLGHHP RDR                HRH +R   PGG R   +   HPHLP RGG R  RA HH      E   V+ +PD  ++ +H R AP HADG+ PP   G R RSLRR P  G
Sbjct:  147 GDRLGDHDDARRRDRPGDGDERDDLHARDVVPGADAPGRRRAAXXXXXXXXXXXXXXXGPAAAGAGRGLRAEAARGLGHHPGRDRXXXXXXXXXXXXXXXPHRHDQRXXVPGGHRRRDRRADHPHLPHRGGRRRPRAGHHPDRAVPERAAVVDQPDPALHREHRRGAPRHADGLPPPQPEGARGRSLRRLPDPG 340
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10134.161.1 vs. uniprot
Match: A0A4D5RC53_IXOSC (Urease (Fragment) n=2 Tax=Ixodes scapularis TaxID=6945 RepID=A0A4D5RC53_IXOSC)

HSP 1 Score: 70.5 bits (171), Expect = 9.630e-11
Identity = 46/110 (41.82%), Postives = 59/110 (53.64%), Query Frame = 0 
Query:   70 GPQAARGLGHHPRRDRLLPHDRGGNGHSGHDSHRHAKRVVQPGGLRGCLQGPHHPHLPQRGGGRGARARHHRRLRGAECHPVLHEPDQTVYDQHHRRAPGHADGVSPPGQ 179
            GP+ +RGLG +    R L   R    H G D H HA+RV  PG   G  + P H  +P+RG  RG+ ARHHRRLR A+ H ++H+P          R  GHA  +S  GQ
Sbjct:  436 GPETSRGLGIYSSSHRRLSPSRRPLRHPGADPHGHAERVRLPGADAGGFRRPLHSRVPRRGRRRGSCARHHRRLRRAQRHSLVHQPXXXXXXXXXGRGLGHAYHLSSSGQ 545
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10134.161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6J4USL2_9CHLR6.600e-1938.66Urease alpha subunit (Fragment) n=1 Tax=uncultured... [more]
A0A4D5RC53_IXOSC9.630e-1141.82Urease (Fragment) n=2 Tax=Ixodes scapularis TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10134contigEcto-sp13_S_contig10134:176..3932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10134.161.1mRNA_Ecto-sp13_S_contig10134.161.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10134 176..5990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10134.161.1 ID=prot_Ecto-sp13_S_contig10134.161.1|Name=mRNA_Ecto-sp13_S_contig10134.161.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=195bp
GDRIRTDDPLGRRHGTRHGDESDHLHPAPLSHEDDAPIHGRYPDELRLHG
QGEHLQAGGAQRDRGGRCGGPQAARGLGHHPRRDRLLPHDRGGNGHSGHD
SHRHAKRVVQPGGLRGCLQGPHHPHLPQRGGGRGARARHHRRLRGAECHP
VLHEPDQTVYDQHHRRAPGHADGVSPPGQGGTRRRSLRREPYQG*
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