prot_Ecto-sp13_S_contig57326.16136.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57326.16136.1
Unique Nameprot_Ecto-sp13_S_contig57326.16136.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length40
Homology
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BLAST of mRNA_Ecto-sp13_S_contig57326.16136.1 vs. uniprot
Match: D7FMA8_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA8_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 2.730e-18
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 
Query:    1 MVMQSLQGALPVRIGSINICYPPTFFRVVWAIISPFLHE 39
            MVMQSLQGALPVRIGSINICYPPTFFRVVW II+PFLHE
Sbjct:  148 MVMQSLQGALPVRIGSINICYPPTFFRVVWGIINPFLHE 186
[Close]
BLAST of mRNA_Ecto-sp13_S_contig57326.16136.1 vs. uniprot
Match: D7FMA7_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA7_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 2.150e-12
Identity = 26/39 (66.67%), Postives = 35/39 (89.74%), Query Frame = 0 
Query:    1 MVMQSLQGALPVRIGSINICYPPTFFRVVWAIISPFLHE 39
            MV+ S+QG+LPVR+GS+N+CYPP+FFR +W +IS FLHE
Sbjct:  189 MVLDSIQGSLPVRVGSMNMCYPPSFFRWIWMVISTFLHE 227
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57326.16136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMA8_ECTSI2.730e-1894.87CRAL-TRIO domain-containing protein n=2 Tax=Ectoca... [more]
D7FMA7_ECTSI2.150e-1266.67CRAL-TRIO domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 2..39
e-value: 1.2E-5
score: 25.0
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 1..39
score: 8.131
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 1..39
e-value: 9.5E-9
score: 36.7
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 2..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57326contigEcto-sp13_S_contig57326:93..212 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57326.16136.1mRNA_Ecto-sp13_S_contig57326.16136.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57326 93..227 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57326.16136.1 ID=prot_Ecto-sp13_S_contig57326.16136.1|Name=mRNA_Ecto-sp13_S_contig57326.16136.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=40bp
MVMQSLQGALPVRIGSINICYPPTFFRVVWAIISPFLHE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR036865CRAL-TRIO_dom_sf