mRNA_Ecto-sp13_S_contig5727.16131.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5727.16131.1
Unique NamemRNA_Ecto-sp13_S_contig5727.16131.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig5727.16131.1 vs. uniprot
Match: D7G0R3_ECTSI (Aldehyde Dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R3_ECTSI)

HSP 1 Score: 941 bits (2433), Expect = 0.000e+0
Identity = 474/527 (89.94%), Postives = 481/527 (91.27%), Query Frame = 1
Query:   61 LGGRWVESSAHETLPDPLNGEPFLKVPATTPSEAQAFVASLELCSKSGLHNPFKSPERYLAYGSATAKAAALMAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQSSTGYRWPFGPVAIVSPFNFPL------------------------------EIPVLQLMGALYMGNKVIFKTDSKVSLVMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAEILAEALDGKVKVEDAGFDWKILGPDVQEEEFVAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGILENLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKLSGAKVLFGGKPLSSEKAKRIPAQYGAWEPTAVFVPLKEMLKSPENFALCTTEIFGPFQARWAGLSFFSQRIVVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR 1551
            +GGRWVESSAHETLPDPLNGEPFLKVPATTP EAQAFVASLELCSKSGLHNPFKSPERYLAYGSATAKAAALMAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQ+STGYRWPFGPVAIVSPFNFPL                              EIPVLQLMGALYMGNKVIFKTDSKVS+VMEQTLRLFHHCG PVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAEILAEALDGKVKVEDAGFDWKILGPDVQEEE+VAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGILE LKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLK+SGAKVLFGGKPLSSEKAK+IPAQYGAW+PTAVFVPLKEMLKSPENFALCTTEIFGPFQ             VVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR
Sbjct:    9 VGGRWVESSAHETLPDPLNGEPFLKVPATTPGEAQAFVASLELCSKSGLHNPFKSPERYLAYGSATAKAAALMAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQASTGYRWPFGPVAIVSPFNFPLGEQPSNEGTSVYQVLVAGLVDSVVMAYLCIEIPVLQLMGALYMGNKVIFKTDSKVSVVMEQTLRLFHHCGAPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAEILAEALDGKVKVEDAGFDWKILGPDVQEEEYVAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGILETLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKISGAKVLFGGKPLSSEKAKKIPAQYGAWDPTAVFVPLKEMLKSPENFALCTTEIFGPFQ-------------VVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR 522          
BLAST of mRNA_Ecto-sp13_S_contig5727.16131.1 vs. uniprot
Match: A0A6H5J7Q9_9PHAE (Aldedh domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Q9_9PHAE)

HSP 1 Score: 728 bits (1878), Expect = 6.510e-261
Identity = 382/466 (81.97%), Postives = 390/466 (83.69%), Query Frame = 1
Query:  277 MAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQSSTGYRWPFGPVAIVSPFNFPL-EIPVLQLMGALYMGNKVIFKTDSKVSLVMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAEILAEALDGKVKVEDAGFDWKILGPDVQEEEFVAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGILENLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKLSGAKVLFGGKPLSSEKAKRIPAQYGAWEPTAVFVPLKEMLKSPENFALCTTEIFGPFQARWA-GLSFFSQRI---------------------------------------VVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR 1551
            M+VPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQ+STGYRWPFGPVAIVSPFNFPL E P  +       G  V      +VS+VMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAE         VKVEDAGFDWKILGPDVQEEE+VAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGI+E LKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKLSGAKVLFGGKPLSSEKAK+IPAQYGAWEPTAVFVPLKEMLKSPENFALCTTEIFGPFQAR A  LS    R                                        VVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR
Sbjct:    1 MSVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQTSTGYRWPFGPVAIVSPFNFPLGEQPSKE-------GTSVY-----QVSVVMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAE---------VKVEDAGFDWKILGPDVQEEEYVAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGIVETLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKLSGAKVLFGGKPLSSEKAKKIPAQYGAWEPTAVFVPLKEMLKSPENFALCTTEIFGPFQARGAEDLSQIPTRNKCIEFPQNERDKPPRHTMFNPTALSGLLPENCSRCIPCQVVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR 445          
BLAST of mRNA_Ecto-sp13_S_contig5727.16131.1 vs. uniprot
Match: A0A835Z7L1_9STRA (Aldehyde dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L1_9STRA)

HSP 1 Score: 696 bits (1795), Expect = 3.070e-247
Identity = 345/514 (67.12%), Postives = 407/514 (79.18%), Query Frame = 1
Query:   10 VDPGSLSGSNPHTVNNLLGGRWVESSAHETLPDPLNGEPFLKVPATTPSEAQAFVASLELCSKSGLHNPFKSPERYLAYGSATAKAAALMAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQSSTGYRWPFGPVAIVSPFNFPLEIPVLQLMGALYMGNKVIFKTDSKVSLVMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAEILAEALDGKVKVEDAGFDWKILGPDVQEEEFVAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGILENLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKLSGAKVLFGGKPLSSEKAKRIPAQYGAWEPTAVFVPLKEMLKSPENFALCTTEIFGPFQARWAGLSFFSQRIVVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR 1551
            VDP ++S   PH V NLLGG+W ES++    PDPLNG  F++V     +EAQ FV SL+ C KSGLHNPFK+PERY+ YG+ +AKA+A M  PEVE FF RLI RVAPKSYAQA GEVVV+RRFLENFSGD VR LARSFS PGDH GQ S+G+RWPFGPVA+VSPFNFPLEIP+LQ MGAL+MGNKV++K DS+VS+VMEQ LRL H CG P  D+D + C+G VM G+L +A+PRVTQFTGSS V E L+ AL G+V++EDAG DWKILGPDV   ++ A  CDQDAYA+SGQKCSAQS+LFVH++W ++G+L+ L++LA RR+LEDLTVGPVL+VTTE  M H+D+LL++ GA+VLFGGKPL    A RIP  YGAWEPTAV VPL+E+LK PE+  +CT EIFGP Q             VVT Y D EL  VL ACE ++ HLTAAVVS++ +FQR VL ATVNGTTYCG RARTTGAPQNHWFGPAGDPRAAGIGT EAIRMVWSCHR
Sbjct:   15 VDPDAISADAPHHVLNLLGGKWQESASATPFPDPLNGGTFMRVSEIGAAEAQPFVKSLQECPKSGLHNPFKNPERYVTYGAVSAKASAEMRKPEVERFFARLIQRVAPKSYAQALGEVVVSRRFLENFSGDQVRYLARSFSDPGDHQGQHSSGWRWPFGPVAVVSPFNFPLEIPLLQTMGALFMGNKVVYKGDSRVSVVMEQALRLLHACGAPPADLDMVACEGAVMQGLLEAARPRVTQFTGSSTVGEALSAALGGRVRLEDAGLDWKILGPDVGNVDYAAWVCDQDAYAFSGQKCSAQSLLFVHDSWVRAGLLDRLRTLAMRRSLEDLTVGPVLTVTTERAMAHVDALLRVPGAEVLFGGKPLD---APRIPRCYGAWEPTAVRVPLRELLK-PEHLPVCTREIFGPMQ-------------VVTTYGDGELPLVLAACEALDAHLTAAVVSSNRAFQRAVLGATVNGTTYCGARARTTGAPQNHWFGPAGDPRAAGIGTREAIRMVWSCHR 511          
BLAST of mRNA_Ecto-sp13_S_contig5727.16131.1 vs. uniprot
Match: A0A2R6WW72_MARPO (Aldedh domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WW72_MARPO)

HSP 1 Score: 688 bits (1776), Expect = 4.070e-244
Identity = 339/517 (65.57%), Postives = 408/517 (78.92%), Query Frame = 1
Query:    1 FRAVDPGSLSGSNPHTVNNLLGGRWVESSAHETLPDPLNGEPFLKVPATTPSEAQAFVASLELCSKSGLHNPFKSPERYLAYGSATAKAAALMAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQSSTGYRWPFGPVAIVSPFNFPLEIPVLQLMGALYMGNKVIFKTDSKVSLVMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAEILAEALDGKVKVEDAGFDWKILGPDVQEEEFVAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGILENLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKLSGAKVLFGGKPLSSEKAKRIPAQYGAWEPTAVFVPLKEMLKSPENFALCTTEIFGPFQARWAGLSFFSQRIVVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR 1551
            F +V P  +SG +P  V NL+GG+W  SS  +TL DPLNG+ F+KVP T+ SE Q F+ASL+ C KSGLHNP K+ ERYL YG  +AK A  +  P++ D+F RLI RV+PKSYAQA GEV+VT++F ENFSGD VR LARSF+VPG+H+GQ S G RWP+GPV I++PFNFPLEIP LQLMGALYMGNK + K DSKVS+VMEQ LRL H CG+P+EDVDF+N DGPVM+ VL  A+P++T FTGSS+VAE LA  L G++K+EDAGFDWKILGPDVQ+ ++V+  CDQDAYA SGQKCSAQSILF+HENW+K+G+++ LK+LA RR LEDLTVGPVL+VTT+  + HI+SLLK+ G+K+ FGGKPLS+     IP  YGA EPTAV+VPLKE+LK+ +NF L TTEIFGPFQ             V+TEY   EL  VLEACE+M+ HLTAAVVSNDV F + VL  TVNGTTY GIRARTTGAPQNHWFGP GDPR AGIGT EAI++VWS HR
Sbjct:   27 FASVHPNEISGQHPADVKNLVGGKWSGSSKFDTLVDPLNGQNFIKVPNTSQSEVQPFIASLQSCPKSGLHNPLKNLERYLLYGDVSAKVANALRHPKLADYFARLIQRVSPKSYAQAEGEVMVTQKFFENFSGDQVRFLARSFTVPGNHLGQQSIGLRWPYGPVTIITPFNFPLEIPALQLMGALYMGNKPLLKVDSKVSIVMEQMLRLLHDCGMPLEDVDFLNSDGPVMNHVLVEAEPKMTLFTGSSRVAEKLAGDLKGRIKLEDAGFDWKILGPDVQQVDYVSWVCDQDAYACSGQKCSAQSILFMHENWTKAGVVDKLKTLAKRRKLEDLTVGPVLTVTTKRILDHIESLLKIPGSKIAFGGKPLSNHT---IPEIYGAVEPTAVYVPLKEILKA-KNFDLVTTEIFGPFQ-------------VITEYKTAELHLVLEACEKMHAHLTAAVVSNDVHFLQEVLGNTVNGTTYAGIRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKLVWSAHR 526          
BLAST of mRNA_Ecto-sp13_S_contig5727.16131.1 vs. uniprot
Match: A0A2P6P2G9_ROSCH (Putative L-glutamate gamma-semialdehyde dehydrogenase n=5 Tax=Rosoideae TaxID=171638 RepID=A0A2P6P2G9_ROSCH)

HSP 1 Score: 680 bits (1754), Expect = 1.240e-240
Identity = 337/517 (65.18%), Postives = 400/517 (77.37%), Query Frame = 1
Query:    1 FRAVDPGSLSGSNPHTVNNLLGGRWVESSAHETLPDPLNGEPFLKVPATTPSEAQAFVASLELCSKSGLHNPFKSPERYLAYGSATAKAAALMAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQSSTGYRWPFGPVAIVSPFNFPLEIPVLQLMGALYMGNKVIFKTDSKVSLVMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAEILAEALDGKVKVEDAGFDWKILGPDVQEEEFVAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGILENLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKLSGAKVLFGGKPLSSEKAKRIPAQYGAWEPTAVFVPLKEMLKSPENFALCTTEIFGPFQARWAGLSFFSQRIVVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR 1551
            F  V+   +SGS P  V+NL+ G+W +SS   T+ DPLNGEPF+KV     +  Q FV SL  C K GLHNPFKSPERYL YG  +AKAA ++++P+V DFFTRLI RVAPKSY QA  EV VT++FLENFSGD VR LARSF VPG+H+GQ S GYRWP+GPVA+++PFNFPLEIPVLQLMGALYMGNK I K DSKVSLVM+Q +RL H+CG+PVEDVDFIN DG  M+ +L  A PR+T FTGSS+VAE LA  L G+VK+EDAGFDWKILGPDV EE++VA  CDQDAYA SGQKCSAQSILF+HENWSK+ +L  +K LA RR LEDLT+GPVL++TTET + H + LL++ G+K+LFGG+PL +     IP  YGA +PTA++VPL+EMLK   N+ L T EIFGPFQ             VVTEY  ++L  VL+A ERM+ HLTAAVVSND  FQ+ VL  TVNGTTY G+RARTTGAPQNHWFGPAGDP  AGIGT EAI++VWSCHR
Sbjct:   36 FATVEAEEISGSLPAEVHNLVKGKWTKSSTWNTIVDPLNGEPFIKVAEIDETGIQPFVESLSKCPKHGLHNPFKSPERYLLYGDISAKAATMLSLPKVADFFTRLIQRVAPKSYQQAYAEVYVTQKFLENFSGDQVRFLARSFGVPGNHLGQQSNGYRWPYGPVAVITPFNFPLEIPVLQLMGALYMGNKPILKVDSKVSLVMDQMMRLLHYCGLPVEDVDFINSDGKTMNKLLLEANPRMTLFTGSSRVAEKLAADLKGRVKLEDAGFDWKILGPDVHEEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSKTSLLSKMKDLAERRKLEDLTIGPVLTLTTETMLDHANKLLQIPGSKLLFGGEPLENHS---IPPVYGAIKPTAIYVPLEEMLKE-NNYELVTREIFGPFQ-------------VVTEYKKDQLPLVLDALERMHAHLTAAVVSNDPHFQQEVLGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPLGAGIGTPEAIKLVWSCHR 535          
BLAST of mRNA_Ecto-sp13_S_contig5727.16131.1 vs. uniprot
Match: A0A7N0VMU1_KALFE (Aldedh domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0VMU1_KALFE)

HSP 1 Score: 677 bits (1747), Expect = 1.240e-239
Identity = 336/517 (64.99%), Postives = 397/517 (76.79%), Query Frame = 1
Query:    1 FRAVDPGSLSGSNPHTVNNLLGGRWVESSAHETLPDPLNGEPFLKVPATTPSEAQAFVASLELCSKSGLHNPFKSPERYLAYGSATAKAAALMAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQSSTGYRWPFGPVAIVSPFNFPLEIPVLQLMGALYMGNKVIFKTDSKVSLVMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAEILAEALDGKVKVEDAGFDWKILGPDVQEEEFVAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGILENLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKLSGAKVLFGGKPLSSEKAKRIPAQYGAWEPTAVFVPLKEMLKSPENFALCTTEIFGPFQARWAGLSFFSQRIVVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR 1551
            F   +   +SGS P  V NL+GG+W  SS   TL DPLNGEPF+KV     SE   FV SL  C K GLHNPFKSPERYL  G  TA+AA ++++P+V DFFTRLI RVAPKSY QA GEV VTR+FLENF GD VR LARSF VPG+H+GQ S G+RWP+GPV I++PFNFPLEIPVLQLMGALYMGNK + K DSKVS+VMEQ LRL H CG+P+EDVDFIN DGP M+ +L  A P +T FTGSS+VAE LA  L G++K+EDAGFDWKILGPDVQEE++VA  CDQDAYA SGQKCSAQSILF+HENWSKS +L  LK LA RR LEDLTVGPVL++TTE  ++H   LLK+SG+K+LFGG+ L +     IP+ YGA +PTA+++PL+E+LK  EN+ L T EIFGPFQ             V+T+Y  ++L  VL+A ERM+ HLTAAVVSND  F + V+  TVNGTTY G+RARTTGAPQNHWFGPAGDPR AGIGT EAI++VWSCHR
Sbjct:   32 FATAEVEEISGSQPAEVQNLVGGKWGRSSDVNTLLDPLNGEPFIKVHEVNKSEIHPFVESLSKCPKHGLHNPFKSPERYLLLGDVTARAAHMLSLPKVSDFFTRLIQRVAPKSYKQAEGEVYVTRKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVVIITPFNFPLEIPVLQLMGALYMGNKPLLKVDSKVSIVMEQMLRLLHTCGLPIEDVDFINSDGPTMNKLLLEANPSMTLFTGSSRVAEKLAVDLKGRIKLEDAGFDWKILGPDVQEEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSKSSLLSKLKELAERRKLEDLTVGPVLTLTTEAMLEHASKLLKISGSKLLFGGETLENHS---IPSIYGAIKPTAIYIPLEEILKD-ENYDLVTKEIFGPFQ-------------VITDYKKDQLPMVLDALERMHAHLTAAVVSNDPIFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHR 531          
BLAST of mRNA_Ecto-sp13_S_contig5727.16131.1 vs. uniprot
Match: A0A166GSN1_DAUCS (Aldedh domain-containing protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166GSN1_DAUCS)

HSP 1 Score: 676 bits (1745), Expect = 1.510e-239
Identity = 338/523 (64.63%), Postives = 405/523 (77.44%), Query Frame = 1
Query:    1 FRAVDPGSLSGSNPHTVNNLLGGRWVESSAHETLPDPLNGEPFLKVPATTPSEAQAFVASLELCSKSGLHNPFKSPERYLAYGSATAKAAALMAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQSSTGYRWPFGPVAIVSPFNFPLEIPVLQLMGALYMGNKVIFKTDSKVSLVMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAEILAEALDGKVKVEDAGFDWKILGPDVQEEEFVAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGILENLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKLSGAKVLFGGKPLSSEKAKRIPAQYGAWEPTAVFVPLKEMLKSPENFALCTTEIFGPFQARWAGLSFFSQRIVVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQR------RVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR 1551
            F  VD  SLSGS P  V NL+ G W +SS   TL DPLNGEPF+KV        Q FV SL  C K GLHNPFK+PERYL YG  T KAA ++++PEV DFFTRLI RVAPKSY QA+GEV VT++FLENF GD VR LARSF+VPG+H+GQ S G+RWP+GPVAI++PFNFPLEIPVLQLMGALYMGNK + K DSKV +VMEQ LRL H CG+P+EDVDFIN DG  M+ +L   +PR+T FTGSS+VA++LA  L G++K+EDAGFDWKILGPDVQE ++VA  CDQDAYA SGQKCSAQS+LF+HENWS+S +++ L +LA+RR LEDLT+GPVL+VTTE  ++H+  LLK+ G+K+LFGG+ L++ K   IP+ YGA +PTAVFVPL E+LK   N+ L TTEIFGPFQ             +VTEY DN+L  VL+A ERM+ HLTAAVVSNDV F +       V+ +TVNGTTY G+RARTTGAPQNHWFGPAGDPR AGIGT EAI++VWSCHR
Sbjct:   12 FATVDVDSLSGSQPAEVQNLVQGNWTKSSKWNTLVDPLNGEPFIKVSEIDEGGIQPFVDSLSKCPKHGLHNPFKAPERYLLYGDITTKAAHMLSLPEVSDFFTRLIQRVAPKSYQQAHGEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVCIVMEQMLRLLHECGLPMEDVDFINSDGSTMNKLLLEGKPRMTLFTGSSRVADLLAVDLKGRIKLEDAGFDWKILGPDVQEVDYVAWVCDQDAYACSGQKCSAQSMLFMHENWSQSSLVKQLGNLAARRKLEDLTIGPVLTVTTERMLEHLRKLLKIPGSKLLFGGEALANHK---IPSVYGAIKPTAVFVPLDEILKDG-NYELVTTEIFGPFQ-------------IVTEYKDNQLAMVLDAVERMHAHLTAAVVSNDVLFLQARLAHYEVIGSTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHR 517          
BLAST of mRNA_Ecto-sp13_S_contig5727.16131.1 vs. uniprot
Match: A0A2K1XIZ4_POPTR (Aldedh domain-containing protein n=11 Tax=Saliceae TaxID=238069 RepID=A0A2K1XIZ4_POPTR)

HSP 1 Score: 676 bits (1744), Expect = 3.680e-239
Identity = 330/517 (63.83%), Postives = 402/517 (77.76%), Query Frame = 1
Query:    1 FRAVDPGSLSGSNPHTVNNLLGGRWVESSAHETLPDPLNGEPFLKVPATTPSEAQAFVASLELCSKSGLHNPFKSPERYLAYGSATAKAAALMAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQSSTGYRWPFGPVAIVSPFNFPLEIPVLQLMGALYMGNKVIFKTDSKVSLVMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAEILAEALDGKVKVEDAGFDWKILGPDVQEEEFVAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGILENLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKLSGAKVLFGGKPLSSEKAKRIPAQYGAWEPTAVFVPLKEMLKSPENFALCTTEIFGPFQARWAGLSFFSQRIVVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR 1551
            F  VD   +SGS P  V+NL+ G+W+ SS   T+ DPLNGEPF+K+     +  Q FV SL  C K GLHNPFKSPERYL YG  TAKAA ++AVP+V DFFTRLI RVAPKSY QA GEV VT++FLENFSGD VR LARSF+VPG+H+GQ S G+RWP+GPVAI++PFNFPLEIP+LQLMGALYMGNK I K DSKV +VMEQ +RL HHCG+P+ DVDFIN DG  M+ +L  A P++T FTGSSKVAE LA  L G++K+EDAGFDWKILGPDV E +++A  CDQDAYA SGQKCSAQSILF+HENWS + ++  +K LA RR LEDLT+GPVL++TTE  + H++ LL++ G+K+LFGGKPL +     IP+ YGA +PTA++VPL+E+L++ +N+ L T EIFGPFQ             V+TEY  ++L  VL+A ERM+ HLTAAVVSNDV F + V+  TVNGTTY G+RARTTGAPQNHWFGPAGDPR AGIGT EAI++VWSCHR
Sbjct:   33 FATVDAEGISGSQPAKVHNLVQGKWIGSSTWNTIVDPLNGEPFIKIAEVDETGTQPFVESLSKCPKHGLHNPFKSPERYLLYGDITAKAAHMLAVPKVSDFFTRLIQRVAPKSYQQALGEVQVTQKFLENFSGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPLLQLMGALYMGNKPILKVDSKVCIVMEQMIRLLHHCGMPLSDVDFINSDGKTMNKLLLEANPQMTLFTGSSKVAEKLAVDLKGRIKLEDAGFDWKILGPDVNEVDYIAWVCDQDAYACSGQKCSAQSILFMHENWSATSLISKMKDLAERRKLEDLTIGPVLTLTTEAMLDHMNKLLQIPGSKLLFGGKPLENHS---IPSIYGALKPTAIYVPLEEILRA-KNYELVTREIFGPFQ-------------VITEYKKDQLPMVLDALERMHAHLTAAVVSNDVLFLQEVIGKTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHR 532          
BLAST of mRNA_Ecto-sp13_S_contig5727.16131.1 vs. uniprot
Match: A9S190_PHYPA (Mitochondrial P5CDH n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9S190_PHYPA)

HSP 1 Score: 672 bits (1735), Expect = 1.750e-237
Identity = 337/517 (65.18%), Postives = 395/517 (76.40%), Query Frame = 1
Query:    1 FRAVDPGSLSGSNPHTVNNLLGGRWVESSAHETLPDPLNGEPFLKVPATTPSEAQAFVASLELCSKSGLHNPFKSPERYLAYGSATAKAAALMAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQSSTGYRWPFGPVAIVSPFNFPLEIPVLQLMGALYMGNKVIFKTDSKVSLVMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAEILAEALDGKVKVEDAGFDWKILGPDVQEEEFVAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGILENLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKLSGAKVLFGGKPLSSEKAKRIPAQYGAWEPTAVFVPLKEMLKSPENFALCTTEIFGPFQARWAGLSFFSQRIVVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR 1551
            F + D   LS ++ + ++NL+ G+W ++S    L DPLNGE F+ VP T+  E   FV SL  CSKSGLHNP K+PERYL YG   AKAA L+  P+VE FF RLI RVAPKS+AQA GEV VT++FLENFSGD VR LARSF VPG++ GQ S G RWP+GPVAI++PFNFPLEIP LQ +GAL+MGNK I K DSKVS+VMEQ +RL H CG+P  D+DFIN DGPVM+ +L  A+P+ T FTGSSKVAE LA  L G+VK+EDAGFDWKILGPDVQ E++VA  CDQDAYA SGQKCSAQSILF+HENW+    LE LK LAS+R LEDLTVGPVL+VTTE  + H+ +LL + GA+V FGGKPL++     IP  YGA EPTAVFVPLKE+L++ ENFAL TTEIFGPFQ             ++TEY   +L  V EACERM+ HLTAAVVSNDV F + VL  TVNGTTY GIRARTTGAPQNHWFGPAGDPR AGIGT EAI++VWSCHR
Sbjct:   52 FASCDADKLSEAHQYQMHNLVQGKWEQTSKSIELLDPLNGEKFISVPDTSIDEISPFVQSLRACSKSGLHNPLKNPERYLLYGDIMAKAAHLLKQPQVETFFARLIQRVAPKSFAQAVGEVTVTQKFLENFSGDQVRFLARSFVVPGNYQGQQSNGMRWPYGPVAIITPFNFPLEIPALQALGALFMGNKPILKVDSKVSIVMEQFIRLLHKCGMPPTDMDFINSDGPVMNKLLLEAEPKTTLFTGSSKVAEKLALDLKGRVKLEDAGFDWKILGPDVQNEDYVAWVCDQDAYACSGQKCSAQSILFMHENWANQNFLERLKKLASKRKLEDLTVGPVLTVTTERMLDHVKNLLAIPGARVEFGGKPLTNHT---IPDVYGALEPTAVFVPLKEILRNEENFALATTEIFGPFQ-------------ILTEYKHEDLPLVFEACERMHAHLTAAVVSNDVHFLQEVLSNTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHR 552          
BLAST of mRNA_Ecto-sp13_S_contig5727.16131.1 vs. uniprot
Match: A0A7C9EMQ3_OPUST (L-glutamate gamma-semialdehyde dehydrogenase n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9EMQ3_OPUST)

HSP 1 Score: 673 bits (1736), Expect = 2.250e-237
Identity = 332/517 (64.22%), Postives = 399/517 (77.18%), Query Frame = 1
Query:    1 FRAVDPGSLSGSNPHTVNNLLGGRWVESSAHETLPDPLNGEPFLKVPATTPSEAQAFVASLELCSKSGLHNPFKSPERYLAYGSATAKAAALMAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHVGQSSTGYRWPFGPVAIVSPFNFPLEIPVLQLMGALYMGNKVIFKTDSKVSLVMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKVAEILAEALDGKVKVEDAGFDWKILGPDVQEEEFVAHTCDQDAYAYSGQKCSAQSILFVHENWSKSGILENLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLLKLSGAKVLFGGKPLSSEKAKRIPAQYGAWEPTAVFVPLKEMLKSPENFALCTTEIFGPFQARWAGLSFFSQRIVVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHR 1551
            F  V+   +SGS P  V NL+ G+WV SS+  T+ DPLNGEPF+KV     SE + FV SL  C K GLHNPFKSPERYL YG  +AKA  +++ PEV DFF RLI RV+PKSY QA GEV VT++FLENFSGD VR LARSF VPG+H+GQ S G+RWP+GPVAI++PFNFPLEIPVLQLMGALYMGNK + K DSKVS+VM+Q LRL H CG+P EDVDFIN DG  M+ +L  A PR+T FTGSS+VAE L E L G++K+EDAGFDWKILGPDV+E +++A  CDQDAYA SGQKCSAQS+LF+HENWS S ++  LK LA+RR ++DLTVGPVL+VTTE    H+  LLK+ G+K+LFGG+PL +     IP+ YGA++PTAV+VPL+E+LK  +NF L T EIFGPFQ             V+T+Y  N+L  VL+A ERM+ HLTAAVVSNDV F + V+  TVNGTTY G+RARTTGAPQNHWFGPAGDPR AGIGT EAI++VWSCHR
Sbjct:   70 FATVEAEKISGSRPAEVQNLVQGKWVGSSSWNTIVDPLNGEPFIKVAEVDKSEIKPFVDSLSRCPKHGLHNPFKSPERYLLYGDISAKAGHMLSQPEVSDFFARLIQRVSPKSYEQAKGEVFVTQKFLENFSGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPLLKVDSKVSVVMDQMLRLLHACGLPAEDVDFINSDGKTMNKLLKEANPRMTLFTGSSRVAEKLTEDLKGRIKLEDAGFDWKILGPDVKEVDYIAWVCDQDAYACSGQKCSAQSMLFMHENWSSSPLISKLKELAARRKIQDLTVGPVLTVTTEAMSDHMKKLLKIPGSKLLFGGEPLENHA---IPSIYGAFKPTAVYVPLEEILKD-DNFELVTKEIFGPFQ-------------VITDYKANQLPKVLDALERMHAHLTAAVVSNDVLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHR 569          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5727.16131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0R3_ECTSI0.000e+089.94Aldehyde Dehydrogenase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5J7Q9_9PHAE6.510e-26181.97Aldedh domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7L1_9STRA3.070e-24767.12Aldehyde dehydrogenase n=1 Tax=Tribonema minus Tax... [more]
A0A2R6WW72_MARPO4.070e-24465.57Aldedh domain-containing protein n=3 Tax=Marchanti... [more]
A0A2P6P2G9_ROSCH1.240e-24065.18Putative L-glutamate gamma-semialdehyde dehydrogen... [more]
A0A7N0VMU1_KALFE1.240e-23964.99Aldedh domain-containing protein n=2 Tax=Kalanchoe... [more]
A0A166GSN1_DAUCS1.510e-23964.63Aldedh domain-containing protein n=2 Tax=Daucus ca... [more]
A0A2K1XIZ4_POPTR3.680e-23963.83Aldedh domain-containing protein n=11 Tax=Saliceae... [more]
A9S190_PHYPA1.750e-23765.18Mitochondrial P5CDH n=2 Tax=Physcomitrium patens T... [more]
A0A7C9EMQ3_OPUST2.250e-23764.22L-glutamate gamma-semialdehyde dehydrogenase n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5727contigEcto-sp13_S_contig5727:9..8566 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score948.0
Seed ortholog evalue1.9e-273
Seed eggNOG ortholog2880.D7G0R3
Model size1551
KEGG rclassRC00080,RC00216,RC00242,RC00255
KEGG koko:K00294
KEGG ReactionR00245,R00707,R00708,R04444,R04445,R05051
KEGG Pathwayko00250,ko00330,ko01100,map00250,map00330,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006520,GO:0006536,GO:0006560,GO:0006562,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009507,GO:0009536,GO:0009628,GO:0009651,GO:0009987,GO:0010133,GO:0016054,GO:0016491,GO:0016645,GO:0016646,GO:0019752,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0055114,GO:0071704,GO:0072593,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606
Exons14
EggNOG free text desc.succinate-semialdehyde dehydrogenase (NAD ) activity
EggNOG OGsCOG1012@1,KOG2451@2759
Ec32 ortholog descriptionAldehyde Dehydrogenase
Ec32 orthologEc-20_001280.1
EC1.2.1.88
Cds size1551
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463793.5723822-CDS-Ecto-sp13_S_contig5727:8..1141681463793.5723822-CDS-Ecto-sp13_S_contig5727:8..114Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 9..114 -
1681463793.589778-CDS-Ecto-sp13_S_contig5727:1927..20911681463793.589778-CDS-Ecto-sp13_S_contig5727:1927..2091Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 1928..2091 -
1681463793.599756-CDS-Ecto-sp13_S_contig5727:2762..29731681463793.599756-CDS-Ecto-sp13_S_contig5727:2762..2973Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 2763..2973 -
1681463793.6093335-CDS-Ecto-sp13_S_contig5727:3122..31901681463793.6093335-CDS-Ecto-sp13_S_contig5727:3122..3190Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 3123..3190 -
1681463793.6195679-CDS-Ecto-sp13_S_contig5727:3582..36971681463793.6195679-CDS-Ecto-sp13_S_contig5727:3582..3697Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 3583..3697 -
1681463793.6303267-CDS-Ecto-sp13_S_contig5727:3881..39851681463793.6303267-CDS-Ecto-sp13_S_contig5727:3881..3985Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 3882..3985 -
1681463793.6431932-CDS-Ecto-sp13_S_contig5727:4461..45491681463793.6431932-CDS-Ecto-sp13_S_contig5727:4461..4549Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 4462..4549 -
1681463793.6591833-CDS-Ecto-sp13_S_contig5727:5116..52171681463793.6591833-CDS-Ecto-sp13_S_contig5727:5116..5217Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 5117..5217 -
1681463793.6818678-CDS-Ecto-sp13_S_contig5727:5445..55161681463793.6818678-CDS-Ecto-sp13_S_contig5727:5445..5516Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 5446..5516 -
1681463793.6927269-CDS-Ecto-sp13_S_contig5727:6061..61871681463793.6927269-CDS-Ecto-sp13_S_contig5727:6061..6187Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 6062..6187 -
1681463793.7044744-CDS-Ecto-sp13_S_contig5727:6637..68011681463793.7044744-CDS-Ecto-sp13_S_contig5727:6637..6801Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 6638..6801 -
1681463793.7157152-CDS-Ecto-sp13_S_contig5727:7458..75561681463793.7157152-CDS-Ecto-sp13_S_contig5727:7458..7556Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 7459..7556 -
1681463793.7250729-CDS-Ecto-sp13_S_contig5727:7883..79571681463793.7250729-CDS-Ecto-sp13_S_contig5727:7883..7957Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 7884..7957 -
1681463793.7360497-CDS-Ecto-sp13_S_contig5727:8505..85661681463793.7360497-CDS-Ecto-sp13_S_contig5727:8505..8566Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5727 8506..8566 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5727.16131.1prot_Ecto-sp13_S_contig5727.16131.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5727 9..8566 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5727.16131.1

>prot_Ecto-sp13_S_contig5727.16131.1 ID=prot_Ecto-sp13_S_contig5727.16131.1|Name=mRNA_Ecto-sp13_S_contig5727.16131.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=517bp
FRAVDPGSLSGSNPHTVNNLLGGRWVESSAHETLPDPLNGEPFLKVPATT
PSEAQAFVASLELCSKSGLHNPFKSPERYLAYGSATAKAAALMAVPEVED
FFTRLIMRVAPKSYAQANGEVVVTRRFLENFSGDNVRMLARSFSVPGDHV
GQSSTGYRWPFGPVAIVSPFNFPLEIPVLQLMGALYMGNKVIFKTDSKVS
LVMEQTLRLFHHCGVPVEDVDFINCDGPVMHGVLTSAQPRVTQFTGSSKV
AEILAEALDGKVKVEDAGFDWKILGPDVQEEEFVAHTCDQDAYAYSGQKC
SAQSILFVHENWSKSGILENLKSLASRRTLEDLTVGPVLSVTTETCMKHI
DSLLKLSGAKVLFGGKPLSSEKAKRIPAQYGAWEPTAVFVPLKEMLKSPE
NFALCTTEIFGPFQARWAGLSFFSQRIVVTEYDDNELDAVLEACERMNNH
LTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRA
AGIGTIEAIRMVWSCHR
back to top

mRNA from alignment at Ecto-sp13_S_contig5727:9..8566-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5727.16131.1 ID=mRNA_Ecto-sp13_S_contig5727.16131.1|Name=mRNA_Ecto-sp13_S_contig5727.16131.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8558bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5727:9..8566- (Ectocarpus species13 EcNAP12_S_4_19m)
TTTCGCGCAGTTGATCCAGGAAGCTTGTCCGGAAGCAACCCTCACACCGT CAATAATCTATGTGAGCCGCCCGCATTGTATTGTAGGCAAGATTTGCAGA ATCGTCGTCCTTGACTGTGTCGATCAAACTTCGAAGCTTACCTACCAGTT AGTGTGGAAGATGCGTTCGACTTGTTTAGATCATTGCGGGTGAAGCAGAG GGGCACAAACGTGTGGAACGGTTGACCAGTCGGAGCTTGCGCAATAAAAG CGGTCAACGCTGCGAAATGCGCGAAATTCGCCAAAAGGTGCAGTGAAAGT CGGCCCCAGCAGCACGCGAAACCTGGCGAAAGCATCTCTAACGCGCCCTT CTCTACTGTGCTTTGATGGAAACGCTAGAGTTCTGGATCATCGTGCGCAC CTGACGGGCCCGCCACGTACGCGTTCACCCCTTTCTGAATGGCTGAACTT AACGCTGCTTTGTACGACGATTCCGCCGGCCACACAAAGCAGTTTGTGTT TTTCCTTACGCTTGTTTCTCCTAGAATCCGGTCCCGTTCGCGTAGAAGTC GGCTGCCGTTGTTGATGTTCCTTCGTTCCTCGCAATCGCCGACGTTGCCA CAACACAAGTGGGCGGGCGCTGGGTGGAGTCATCGGCACACGAGACTCTT CCCGACCCCCTCAACGGCGAGCCTTTCCTCAAGGTAATCCCAAATTGAGG AGACAACAGACTAATAATGCACGTTTTGCTGCTTACCCCCGTGTCTCCTC AATATGCTTGATCGACTTTTTGGCCGTAGAACGAACAACGTTTCCGGTCT GTTGCTCGCAACAACTGTCCAATGCGAAGTGGTTCCAGCAACCCCCTACG AATGTATATCAATAAATCGCCAAAGGATTCTTCGATGGGAGCAACAGTAC AGATCGGCACAAGAGTGACACCGCACCCTGTCACGACAAGCGTTTGAAAT CATGCACGAGGAAATACAACGGTGCACGACAAAGCTTCCTCCCCCTTGTC ACCACGTTAGGTTCCCGCGACTACACCGAGTGAAGCACAGGCTTTCGTTG CTAGCCTCGAATTGTGCTCCAAGAGCGGGCTGCACAATCCATTCAAGAGC CCCGAGAGGTGATTAGTAATGTCAGCTTGCCGCCGTTATGACAGAGTTTG TGGCAGTGGGTTTGGTCGTAGCGCGGCGTGTTTGTCGGGACGGCACAATA TGTCTGCTGAAAAGTACCAAAGTCAACACCGCCCACTCGTGTCCTAATGG GTGAGTTTTATCGCCGATGAAGAATACTACGGCGGCGAGAAACTGGAGGT GGTTTCACGGACAAAGCTGTTTGTGGCGGTAGCCTCGATATGTCGATATT GGCGTTCATTGGGTCGGTGTTGCACGGCTGTTGATGCTGGCACCAATGAT GGGGGTGTTATCCACCTTGGGTGCCAAGGTGAGTTTGGCGGGTTGCTGTC GTTGCTGCTGGCACTGACACGTGGGCTGTGTAGTCGTTTCTGCCGGATGT TGCTCAGGTATTAGTCGGCCTGCAATTTCGCTGGCTGCTTCACAGACTGG AAATCATGGTGTGTGACGGCATACCGTCGAGAATTCTGTTGGCAGATACT GACGGGGAGTGCGCGAAGGAGCACTTCTGACGAACTCGGTCACGTTCCCT TCTTCTAACGACAAGCTGCTGTGCACGTGTTGTTTCCCTCTTCTTGTGCT TGGAGTTGTTTGTTCTTCTATTGATGCCATGTTGTTGATCTTCGTCTACT CTTTGATCTTCCCAGATACCTGGCATATGGAAGCGCCACCGCCAAAGCTG CGGCCCTCATGGCGGTGCCTGAAGTCGAAGACTTCTTCACGAGGCTCATC ATGAGAGTGGCACCCAAGAGCTACGCCCAAGCCAACGGGGAGGTTGTCGT GACGCGGCGTTTCCTCGAAAATTTCTCGGGTGAGTGCTGTGCGAACGCGG GGGGGGGTGTACTCATAATCGCGCATGCCGTAGTCGTTTGACAGGTGATC TCGCATACCTAAAAAGCCGGGACGGAGCACGCTGGATTCCAACGCGGGGG GGGATAAAGTACGTGACCTCTCCAGGTTTCAGGAAGAGAGGTCGAATTCG CGAAAAAGCGCGACAGGTATCACAACTTCCTTGCTGCGCTAGTGAGAGAT TGCTCGTTGGCTTGCTCGAGGTCTTGGTGTGCGTTCCGTTCGTTGTATTC TATGTGTTGCGGTTCGGCCGTAGAGCCTGCCACATTTCCGCCATGAGCAG AATAGTGCCGAATGACGACGACCTCATTTTCTCTCCTTACCGCGGAATCA ATGGAATTGGACGGAACGTATAAGTAAACCATTGGCCATCGACCCCTGAC ACGAACGTGTTGTCGACGACCATATCCAGGCGACAACGTGCGCATGCTGG CGAGGTCATTCAGCGTCCCCGGCGACCACGTCGGGCAGTCATCTACCGGT TACCGCTGGCCGTTCGGCCCCGTCGCCATAGTCAGTCCCTTCAATTTTCC CCTCGGTGAACAACTAGTGACGAGGGTACATCTGTGTACCAGGTTTTGGT GGCTGGACTTGTGGATAGCGTAGTAATGGCGTTTCTATGCATAGGCGTAC TTGACCCAGTTCACGGTGTCGACAGTAGTAGCATCAGACGAGTCATTTTC CTGCGCATGGGCTGTATTGGGCCGCGCGTGCACACGAGGGTGGGGGGTGG TATCAGAGATTTATGACTTTGCGAGGTAACCAGGGGCGTGACATGTCCGC ACCAACCCCGGCGAATCGACCAGCCATCCACGCGGCCTCCTTTTTCCCTT CGCACGTTTTGTTTGGGGCGAATTTGTATCTGTAGCGGTCGGAGTGCGTT TTCGTGGGAGACGGGCGGGGACTGCTGAGCGTCGAATTTACACCACCGAT TAGAGTATGTCTTGTCGATGGTCGCTTCCAGAACATTTGTGTGCGGCGGT GACGTTATTCTTCCTCCGTTTTTCCCTGCCCCCGCGGGCGTTTCTCCTAC TCTGTCGTCGCCGACGCCATGACGATCCCCTAAACCCCTGGCTACCTCAG AAATTCCCGTGCTGCAGCTCATGGGTGCGCTTTACATGGGAAACAAGGTC ATCTTCAAGACGGACTCGAAGGTGATGCACCCGTCCCGGACAAAATCCTG CTGCTACATACCTCTAGTCAATGTTAACGGTAATGACGACGACTCTAAAA GAACAGCGGTTCTCTCTCTCAGATCGCGATAGATTTTGTGGGTTGAGAGC TGCTGGGAATGTCGACAAAGGCTGAATCTGGCGGCTTCCATTGTCTCATT TTCGACAATCGTTAACATCATCAATCCATCCATCATTTCCACCGGTCAGG TTTCCCTGGTGATGGAGCAAACCCTCCGGCTGTTCCACCACTGCGGAGTG CCCGTCGAGGATGTCGACTTCATCAACTGCGATGGCCCCGTCATGCATGG GTGAGACATATTGAAGAGAAATTTACCCACTTTTCGTCCACGATCCCGCT GAGACTGGCGTCTTGCACATGGCCAGCTGGCGAGCCCGGTCGATGCTGTG TTCCTCACCGTACACACTGATTTACGACGTTCAAACCAGAAAGTGTAGGA GGACGAGAACGACTAGGCCTCTGGATTACACTGGGGGCGCAATCAAATAC TCACGTTAATGTTAATGCCAACGCGATTACCGCTTTCACGGAGGGCGACA AATCAGGGTTCATAGTAAGACGGATAATCAAATAATAATGCATACCGTTC CGGCCGGAGATTGAATGTACGCCAATGCGAAACGACACGTGGTCGGTTGT TCACTGTTCATTTGTCCTTTGCCGCCGTGTCCCTTCCCGATGATCGCGTT GAGGTCTGATCGGGCACAACTTGCTGTCATCGCTTGTTCTGTGTTTTTAT TTGATCGATGCCCAATCCTTTCAACAGGCCATGGGAAGGGCACGAGACCG CGACCAACCAAAAAAATCACCCCCCACTTCCGACAATCCTCGTTTGCTAA TCTTTCCCATCTGGCAGGGTTCTTACTTCAGCTCAGCCTCGCGTGACTCA GTTTACCGGGAGTTCAAAAGTGGCCGAGATTCTAGCCGAGGCCCTTGATG GAAAGGTAAGAGCCTTCCTGATTGTGTTACGGCATTCGGCTAGGATGTGA CGTTGGCAATTTCATTTCCACCCCATCGTCAGTCGGAAAATAAACCTAGT GGGTAGAGTTCACTGTGTTTGTGAGCGATGAAGATACCGATAGTAGCGGC AGCGATAACGCAGAGAGGCAGTTTCTCGAGTCAATCTTGCAAAACGAAAG AAAGTAGGTGCATCGCACCACACCACTTATTCTGTTCCGGCTTTCAACAT ACTCGGTCGTTTTGGCCCTTAACAATTGTTGTAGCTTTATTTTTTTACTG TTATGAAAGCATATGCTTGTTGAAGGGGATCTTTCTCAACAAGTGGAGGT TGGTGGTGCCATTTTCGACGGGCTACCCCTCGTGTACCATGCTGATCTAT CTGCCTTTCGCAACCCTAACCCAAGTGACAATAAATGTTGTCGTCGTCAC TTCACGTCGTTCCTTGGTTGTTGTCGTGTAGGTAAAGGTGGAGGACGCTG GGTTTGACTGGAAGATCCTGGGCCCCGACGTTCAGGAGGAGGAGTTCGTG GCGCACACCTGCGACCAGGACGCATACGCTTACAGGTATCTAAAAAATTG CAACATGTGGTACAGTCGAGTCTGTCTGATCCTAGCGGACGCAGACAGTA TCCACCCGACAAACAAAAACAAAACCATCAACAATTTGTTGTTTCCAATG TTCTTCGTCGGTCTGGCGGATGTGCACACTTCAGTCGGTGCGTTTCCTTG TGCCTGATCGTCGTTTCAGTGGGCAGAAGTGCTCGGCCCAGAGCATTCTG TTCGTCCACGAGAACTGGAGCAAGTCTGGCATCCTTGAAAACCTCAAGAG CCTGGCCTCCCGGCGAACCCTCGAAGATCTAACGGTGCGACCGGGTTCTC CTTCCTGATTGGTCTCTTGATGAATTGTAGTTTTCGAAATCGTATGCCGA CGCCTCTTTGATGCAAGACCCGCACATATCTTGTATTGTCGGAAAGGCGG AGATGATCGTTCCTCGGCAGAGATCCAACGACGAATAACATACACAGTCT CTGTGTGTATGTTTGTGTGTTACGTCCCTTTCTTTGTCTAGCTTCGACCA CCACCGTCGGCCAACCGATGGAGAGTGTCAGTTTCAGTAGCAGTAAAGAG GAGTAATATTCCTTGACTGGGGCACCACTACCGAGTAGATCCAGGTCTGC TGTAGTCGATCCATTCATATCTTGTTCCGGGGCAACATTGAACGGAACTA TCGTATGTGGTTGTCCGATTTTTCAGGTGGGGCCCGTGTTATCCGTGACA ACCGAGACATGCATGAAGCACATCGACAGCCTACTCAAGCTAAGGTACGA CACAAAACATAGGACAGGAAAAATGCACTTGTTGCGTGTACGTATGTCAC TTATAGCGTTGGGTGGTTCGTTTGCGGGTGCTATGGAAGCGATTAAAACA CCAAGTGCGAGATGGACCAAATTGCAAGTTGCCTTGGAAACAGTGGCGCG AAGGTGTTGTTCGGGGGGAAGCCGCTTTCGTCAGAAAAGGCCAAGAGAAT TCCTGCCCAGTACGGCGCGTGGGAGCCCACCGCGGTGTTTGTGCCGCTCA AGGAGATGCTCAAGTCGCCAGAGAACTTCGCGCTCTGCACCACCGAGATA TTCGGACCATTCCAGGCAAGATGGGCGGGTCTGTCGTTTTTCAGTCAGAG AATAGTCTATGGATAACTAGAGGAAGGGCGGGGGAGGGGTAGGCTGTAGA AGGGTCTCTGTGGTCGGATTCTGTTCCGCCCTCGAGTACCAATCTCTCCC GTAACGAAGATAGGGAGGGGGGCACAGAGGGACAGAAGGAGGGGGGGATG ATTCTGAACCAACCAGGATTGTATGACGTGTTGTTTGAGCCGAGGAGATG TGTCAAGCCTGCTGGGAATCGTTCACAGCGCGTGTCTACCTCTCGACGAG CGAGACATTCGGCTTGTTGTCTCAGAGTAGGTGTTCAGCCCTTGTCAGGC AATTTCGGCTTTGATTTGTTTTGGCACCGGGACGTCGGGAGGGGCGTAGG AAGGGAGTCGACACAAGGGGCCCTGATTGTGCTGGCACAATCAACTGTGT GTTGTATCGGTGGAAGTGGCAGCAGGAGCTACTGTGGCGAAGAACGGAGG TATAGCAGTCTTCGGGTCGATGTTATGGTTGACTGATATCAGGAGGCGTC GACGTCACTCAAGTCAAGGCTTTCCTTAGCGGACCAAAGCCGAATCCCGA CGTGAAACAAGTGCATTGAGTTTCCCAAAAACGAGCGTGATAAGCCGCCG CCTCATTCCATGTTCAACCCCACCGCACTCTCCGGTCTCCTTCCTGAAAA TTGTTCGCGATGCATCCCATGCCAGGTGGTCACCGAGTACGACGACAACG AGCTCGACGCCGTCCTTGAAGCGTGCGAGCGCATGAACAACCACCTGACG GCCGCGGTGGTGTCGAACGATGTGTCCTTTCAAAGGAGGGTGCTCGAGGC CACCGTCAATGGCACAACCTACTGCGGGATCAGGGCGAGGTGAGCGAGGG TCCTGCCTGCTACGTTTCCAATGGGATACACGTATTTTTCTGCAGGAGGG CGGTAGGAAGCGTGCCAGCATTAGAAAAATATCAGTGTGGATTGGGAACG GTATCAGAGCGACCCGTGGTGGTAAGACCCAAGTCGTCGGAGGAACAAAG AACAACAGCAAGCCGGCAAAATATTCGTGCCCGTCCTGCGGCTGCTGTTT CGTGTTGGCATCCATCTGTGCATCATCTGTCCGGGTTGGGGTTGCGTGGG CACCTGTTGCGATTTGTCATGTGCGTTCAGACCTACTCGGATGGGTGCTG CTAGTCCCTTGGTGAAGTATGTTGTCCGCATGTGTTGGTTGGCCTTCGTC AATGTGGAGCAGCTTCGATCGAAACCTCATTCTCCCTCCATGCATGAGGG AGAAAACGTTGTTGTTGCCGTCTAAGGAGTGTTCAAGGACACAAAAGCAA ATTCTTGCGCGTGGCGACAATTCAGGCATGAAACGTGCTACCATGACACC AACGGTGGCGTACAACGCACACAGCAGCACCTGATTCTCATAGAGAGCAT GGATGCTGGGAACGAAAACTCTTAGTAGCGATTGTGTGAGAATTCCTTCA CCATCCAAACAGTAAACAGTACGGCGGCACCATCTCCCGAACCTGAACTG TGTAAAAGACAAAGTTGTGTTGTCTGCAGGGTATCAGCGACAGGGGTGTC AAGAACAGTATTAGCTCTAAAATAAGGCGGAAAACACATTCAGGGTGAAT TTAACCATGGGAATGTGAAGCTGGCCAGTATTATAAAGCATTGAATCGTT TTTGGGCGCATTGTTTGCGCCCTTTCCGTCTCACGGTCTCTCGAACACCG TTGCTCAACAGGGGAGGAGGGGATTGAGGTCGTTTCTATGTACGTTCTCC GCTTGTTTGTCCCGTGCACAAGAAACCGGAAAGACAAGATATGAACTGTT TTTGACATGTTGGCTGACCCTGAGCAATCGATCACCTAGCTTAGGGTTTG GGTCAGCCTAATATCGAGGTGCGAAGGAAACCGAATGAAGCTGGAAACAC AAGATGTCAACCTTGATCGATGGGAGTCACCTGAGACAGTTCTTGTCTCA GCAGCTCCAAATAAACCAGGGGACACCTCGGGAAAATTCCCGCCGTTTTT TTCCCGCCGTGGTGGGCGGTCCCGGTACTGGCGGGAATTACCGCCACATT CGGTGGTACCGGGAACCGCCGAAGGCGGTACCGCCGAAAAACGAAATATC GCCGACCGCCTAAAAAGTACCGCCACATTGCAGTACCGCCAAAATGGTAC CGCCAAAAAACGAAGTACCGGGAACCACCTAAAAAGAACCGCCATATTGC AGTACCGCCGAAAACGTACCGCCGTACTGCAGTACCGCCAAAATGGTACC GACAAAACGAAGTACTGGGAACCGCCAAAATAGAACCGCCATATTTCCGA ACCGCCAGAAAAGTACCGCCATAATTGACAGTACCGGGAACCGCCAAAGG CGGTACCGCCGGAAAACGGAATACCGCCAACCGCCAAAAAAGTACCGCCA CATTGAAGAACCGCCCCGCCTGGATCCGCCAAAAAACAAGTACCGAGGTG TATCCTGAAATATACGCTTTTTCTCGAGAAATGGTTCAACATCATGATGC TGAGGCTCAGACTTTATACGAGATTTGCGGCCAAGAAACGTTCGGTGCCT GGGGAAAATCTGTACCGACGCATCTCTGAGCAACTTCGTCCGCTTGGTTG CAAAATTCCGTTCCATTATTTGTTTTACCTGCAACCTCAAATGCTTCATC AGGACTACGGGGGCACCGCAAAACCACTGGTTTGGCCCGGCGGGAGATCC CCGCGCTGCAGGCATCGGCACCATCGAGGCTATCAGAATGGTCTGGTCTT GCCACAGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5727:9..8566-

>mRNA_Ecto-sp13_S_contig5727.16131.1 ID=mRNA_Ecto-sp13_S_contig5727.16131.1|Name=mRNA_Ecto-sp13_S_contig5727.16131.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1551bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5727:9..8566- (Ectocarpus species13 EcNAP12_S_4_19m)
TTTCGCGCAGTTGATCCAGGAAGCTTGTCCGGAAGCAACCCTCACACCGT
CAATAATCTATTGGGCGGGCGCTGGGTGGAGTCATCGGCACACGAGACTC
TTCCCGACCCCCTCAACGGCGAGCCTTTCCTCAAGGTTCCCGCGACTACA
CCGAGTGAAGCACAGGCTTTCGTTGCTAGCCTCGAATTGTGCTCCAAGAG
CGGGCTGCACAATCCATTCAAGAGCCCCGAGAGATACCTGGCATATGGAA
GCGCCACCGCCAAAGCTGCGGCCCTCATGGCGGTGCCTGAAGTCGAAGAC
TTCTTCACGAGGCTCATCATGAGAGTGGCACCCAAGAGCTACGCCCAAGC
CAACGGGGAGGTTGTCGTGACGCGGCGTTTCCTCGAAAATTTCTCGGGCG
ACAACGTGCGCATGCTGGCGAGGTCATTCAGCGTCCCCGGCGACCACGTC
GGGCAGTCATCTACCGGTTACCGCTGGCCGTTCGGCCCCGTCGCCATAGT
CAGTCCCTTCAATTTTCCCCTCGAAATTCCCGTGCTGCAGCTCATGGGTG
CGCTTTACATGGGAAACAAGGTCATCTTCAAGACGGACTCGAAGGTTTCC
CTGGTGATGGAGCAAACCCTCCGGCTGTTCCACCACTGCGGAGTGCCCGT
CGAGGATGTCGACTTCATCAACTGCGATGGCCCCGTCATGCATGGGGTTC
TTACTTCAGCTCAGCCTCGCGTGACTCAGTTTACCGGGAGTTCAAAAGTG
GCCGAGATTCTAGCCGAGGCCCTTGATGGAAAGGTAAAGGTGGAGGACGC
TGGGTTTGACTGGAAGATCCTGGGCCCCGACGTTCAGGAGGAGGAGTTCG
TGGCGCACACCTGCGACCAGGACGCATACGCTTACAGTGGGCAGAAGTGC
TCGGCCCAGAGCATTCTGTTCGTCCACGAGAACTGGAGCAAGTCTGGCAT
CCTTGAAAACCTCAAGAGCCTGGCCTCCCGGCGAACCCTCGAAGATCTAA
CGGTGGGGCCCGTGTTATCCGTGACAACCGAGACATGCATGAAGCACATC
GACAGCCTACTCAAGCTAAGTGGCGCGAAGGTGTTGTTCGGGGGGAAGCC
GCTTTCGTCAGAAAAGGCCAAGAGAATTCCTGCCCAGTACGGCGCGTGGG
AGCCCACCGCGGTGTTTGTGCCGCTCAAGGAGATGCTCAAGTCGCCAGAG
AACTTCGCGCTCTGCACCACCGAGATATTCGGACCATTCCAGGCAAGATG
GGCGGGTCTGTCGTTTTTCAGTCAGAGAATAGTGGTCACCGAGTACGACG
ACAACGAGCTCGACGCCGTCCTTGAAGCGTGCGAGCGCATGAACAACCAC
CTGACGGCCGCGGTGGTGTCGAACGATGTGTCCTTTCAAAGGAGGGTGCT
CGAGGCCACCGTCAATGGCACAACCTACTGCGGGATCAGGGCGAGGACTA
CGGGGGCACCGCAAAACCACTGGTTTGGCCCGGCGGGAGATCCCCGCGCT
GCAGGCATCGGCACCATCGAGGCTATCAGAATGGTCTGGTCTTGCCACAG
G
back to top