prot_Ecto-sp13_S_contig57123.16107.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57123.16107.1
Unique Nameprot_Ecto-sp13_S_contig57123.16107.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length98
Homology
BLAST of mRNA_Ecto-sp13_S_contig57123.16107.1 vs. uniprot
Match: D8LFW4_ECTSI (Uracil-DNA glycosylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFW4_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 1.010e-51
Identity = 83/90 (92.22%), Postives = 86/90 (95.56%), Query Frame = 0
Query:    9 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMIKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGTTA 98
            +VVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNM+KEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQG+   T A
Sbjct:  112 KVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDA 201          
BLAST of mRNA_Ecto-sp13_S_contig57123.16107.1 vs. uniprot
Match: A0A836CBN7_9STRA (Uracil-DNA glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN7_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.850e-32
Identity = 56/84 (66.67%), Postives = 67/84 (79.76%), Query Frame = 0
Query:    9 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMIKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGY 92
            +VVILGQDPYH PGQAHGL+FSV +GV QPPSLRN++KEA +CCG  PTK+G L  W  QGVLLLNTVL+VE+    SH  +G+
Sbjct:   58 RVVILGQDPYHGPGQAHGLSFSVAQGVAQPPSLRNIVKEATACCGTKPTKNGCLTPWAVQGVLLLNTVLTVEKGAPLSHHKKGW 141          
BLAST of mRNA_Ecto-sp13_S_contig57123.16107.1 vs. uniprot
Match: A0A7S2P901_9STRA (Uracil-DNA glycosylase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P901_9STRA)

HSP 1 Score: 116 bits (290), Expect = 3.620e-31
Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 0
Query:    9 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMIKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGY 92
            +VVI+GQDPYHQPGQ HGLAFSV KGV  PPSLRN+ KEA+    I P   GNL+ W  QGVLLLNTVL+V R +ANSH   G+
Sbjct:   22 RVVIVGQDPYHQPGQGHGLAFSVRKGVKTPPSLRNIFKEAMEDVSIDPPTHGNLEGWARQGVLLLNTVLTVRRGEANSHAKMGW 105          
BLAST of mRNA_Ecto-sp13_S_contig57123.16107.1 vs. uniprot
Match: A0A6G0XWG6_9STRA (Uracil-DNA glycosylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWG6_9STRA)

HSP 1 Score: 119 bits (298), Expect = 5.090e-31
Identity = 59/92 (64.13%), Postives = 69/92 (75.00%), Query Frame = 0
Query:    7 GAQVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMIKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGTTA 98
            G +VVI+GQDPYH PGQAHGL FSV +GV  PPSL+N+ KEA S  GI     G+L SWC+QGVLLLNTVL+V  S+ANSHK QG+   T A
Sbjct:  108 GIKVVIIGQDPYHGPGQAHGLCFSVQRGVPPPPSLKNIYKEACSDVGIPKPSHGSLLSWCNQGVLLLNTVLTVRASEANSHKKQGWETFTDA 199          
BLAST of mRNA_Ecto-sp13_S_contig57123.16107.1 vs. uniprot
Match: B8C427_THAPS (Uracil-DNA glycosylase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C427_THAPS)

HSP 1 Score: 117 bits (293), Expect = 2.540e-30
Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 0
Query:   11 VILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMIKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGY 92
            VI+GQDPYHQPGQ HGLAFSV KGV  PPSLRN+ KEA+   GI+P + GNL+ W  QGVLLLNTVL+V R +ANSH   G+
Sbjct:  106 VIVGQDPYHQPGQGHGLAFSVRKGVSIPPSLRNIFKEAIDDVGISPPEHGNLEGWARQGVLLLNTVLTVRRGEANSHAKLGW 187          
BLAST of mRNA_Ecto-sp13_S_contig57123.16107.1 vs. uniprot
Match: W9UYG7_9GAMM (Uracil-DNA glycosylase n=3 Tax=Nitrincola TaxID=267849 RepID=W9UYG7_9GAMM)

HSP 1 Score: 115 bits (288), Expect = 5.030e-30
Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    9 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMIKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGT 96
            +VVILGQDPYHQPGQAHGL FSV  GV  PPSL+N+ KE  +  G+ P   G LD+W  QGVLLLN+VL+VE SKAN+H+ QG+   T
Sbjct:   59 KVVILGQDPYHQPGQAHGLCFSVRPGVRVPPSLQNIYKELQADLGVRPVSHGYLDTWAEQGVLLLNSVLTVEHSKANAHQGQGWEAFT 146          
BLAST of mRNA_Ecto-sp13_S_contig57123.16107.1 vs. uniprot
Match: A0A3R6V3X4_9STRA (Uracil-DNA glycosylase (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6V3X4_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.460e-30
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 0
Query:    9 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMIKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGTTA 98
            +VVI+GQDPYH PGQAHGL FSV +GV  PPSL+N+ KEA S  GI   K G+L SWC+QGVL+LN VL+V  ++ANSHK QG+   T A
Sbjct:   21 KVVIIGQDPYHGPGQAHGLCFSVARGVPPPPSLKNIYKEANSDVGIPIPKHGSLLSWCNQGVLMLNAVLTVRATEANSHKKQGWETFTDA 110          
BLAST of mRNA_Ecto-sp13_S_contig57123.16107.1 vs. uniprot
Match: A0A6H9GUI4_9SPHN (Uracil-DNA glycosylase n=5 Tax=Novosphingobium TaxID=165696 RepID=A0A6H9GUI4_9SPHN)

HSP 1 Score: 115 bits (287), Expect = 7.460e-30
Identity = 55/90 (61.11%), Postives = 67/90 (74.44%), Query Frame = 0
Query:    9 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMIKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGTTA 98
            +VVILGQDPYH PGQAHGL+FSV +GV  PPSL N+ KE  S CG+TP   GNL+ W  QGVLLLN  L+VE ++A SH+N+G+   T A
Sbjct:   64 RVVILGQDPYHGPGQAHGLSFSVPEGVKVPPSLVNIYKELASDCGVTPPGHGNLEHWARQGVLLLNNALTVEEAQAGSHQNKGWEAITDA 153          
BLAST of mRNA_Ecto-sp13_S_contig57123.16107.1 vs. uniprot
Match: A0A518E2E3_9BACT (Uracil-DNA glycosylase n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518E2E3_9BACT)

HSP 1 Score: 114 bits (286), Expect = 9.330e-30
Identity = 55/84 (65.48%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    9 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMIKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGY 92
            QVV+LGQDPYH PGQAHGL FSV +GV  PPSLRNM+KE  +  G +    G L +W  QGVLLLNTVL+V R +ANSHKNQG+
Sbjct:   56 QVVLLGQDPYHGPGQAHGLCFSVKRGVAAPPSLRNMLKELAADQGCSIPTHGELTAWARQGVLLLNTVLTVRRGEANSHKNQGW 139          
BLAST of mRNA_Ecto-sp13_S_contig57123.16107.1 vs. uniprot
Match: A0A3N4GVD6_9LACT (Uracil-DNA glycosylase n=1 Tax=Aerococcus sp. SJQ22 TaxID=2487350 RepID=A0A3N4GVD6_9LACT)

HSP 1 Score: 114 bits (286), Expect = 9.330e-30
Identity = 57/90 (63.33%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    9 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMIKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGTTA 98
            +VVILGQDPYHQPGQAHGL+FSV KGV  PPSLRN+ KE  +   I P   GNL SW  QGVLLLN VL+V  S+AN+HK +G+   T A
Sbjct:   60 KVVILGQDPYHQPGQAHGLSFSVQKGVKIPPSLRNIYKELQNDLAIEPANHGNLTSWAEQGVLLLNAVLTVPDSQANAHKGKGWEVLTDA 149          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57123.16107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFW4_ECTSI1.010e-5192.22Uracil-DNA glycosylase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CBN7_9STRA3.850e-3266.67Uracil-DNA glycosylase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2P901_9STRA3.620e-3165.48Uracil-DNA glycosylase (Fragment) n=1 Tax=Skeleton... [more]
A0A6G0XWG6_9STRA5.090e-3164.13Uracil-DNA glycosylase n=1 Tax=Aphanomyces euteich... [more]
B8C427_THAPS2.540e-3067.07Uracil-DNA glycosylase n=1 Tax=Thalassiosira pseud... [more]
W9UYG7_9GAMM5.030e-3062.50Uracil-DNA glycosylase n=3 Tax=Nitrincola TaxID=26... [more]
A0A3R6V3X4_9STRA7.460e-3062.22Uracil-DNA glycosylase (Fragment) n=1 Tax=Aphanomy... [more]
A0A6H9GUI4_9SPHN7.460e-3061.11Uracil-DNA glycosylase n=5 Tax=Novosphingobium Tax... [more]
A0A518E2E3_9BACT9.330e-3065.48Uracil-DNA glycosylase n=1 Tax=Lignipirellula crem... [more]
A0A3N4GVD6_9LACT9.330e-3063.33Uracil-DNA glycosylase n=1 Tax=Aerococcus sp. SJQ2... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00987UDG_2_acoord: 1..93
e-value: 1.9E-6
score: 37.5
IPR005122Uracil-DNA glycosylase-likeSMARTSM00986UDG_2coord: 1..93
e-value: 1.9E-6
score: 37.5
IPR005122Uracil-DNA glycosylase-likePFAMPF03167UDGcoord: 3..88
e-value: 2.1E-10
score: 40.8
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 2..98
e-value: 4.6E-37
score: 129.9
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 6..93
IPR002043Uracil-DNA glycosylase family 1PANTHERPTHR11264URACIL-DNA GLYCOSYLASEcoord: 9..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57123contigEcto-sp13_S_contig57123:147..765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57123.16107.1mRNA_Ecto-sp13_S_contig57123.16107.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57123 147..765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57123.16107.1 ID=prot_Ecto-sp13_S_contig57123.16107.1|Name=mRNA_Ecto-sp13_S_contig57123.16107.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=98bp
MTVGCGGAQVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMIKEAVS
CCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGTTA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005122Uracil-DNA_glycosylase-like
IPR036895Uracil-DNA_glycosylase-like_sf
IPR002043UDG_fam1