prot_Ecto-sp13_S_contig5712.16103.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5712.16103.1
Unique Nameprot_Ecto-sp13_S_contig5712.16103.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length302
Homology
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A6H5KZ67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ67_9PHAE)

HSP 1 Score: 581 bits (1497), Expect = 3.370e-209
Identity = 292/301 (97.01%), Postives = 293/301 (97.34%), Query Frame = 0
Query:    1 MPTASMLAETRPPSSRKRPRSRAVQHVSKGAVLLLSLLQLTTARRPGGGGYHYPSVPPQGYDSQDSSFDGGDWGDWRNQPIPGPNPHGMPFSPPIHRRFGQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLEHHMLQALAKDAYVSVRELNRYMGNFAHRHNEMVPFIDRPYSGPPPFPFQ 301
            MPTASMLAE RPPSSRKRPRSR VQHVSK AVLLLSLLQLTTARRPGGGGYHYPSV PQGYDSQDSSFDGGDWGDWRNQPIPGP PHGMPFSPPIHRRF QPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPN+CLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGL VAELKHLEHHMLQALAKDAYVSV ELNRYMGNFAHRHNEMVPFIDRPYSGPPPFPFQ
Sbjct:    1 MPTASMLAEFRPPSSRKRPRSRTVQHVSKSAVLLLSLLQLTTARRPGGGGYHYPSVTPQGYDSQDSSFDGGDWGDWRNQPIPGPKPHGMPFSPPIHRRFEQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNVCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLAVAELKHLEHHMLQALAKDAYVSVSELNRYMGNFAHRHNEMVPFIDRPYSGPPPFPFQ 301          
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: D8LQ63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ63_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 8.150e-92
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0
Query:   89 MPFSPPIHRRFGQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDI 232
            MPFSPPIHRRF QPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFND+
Sbjct:    1 MPFSPPIHRRFEQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDM 144          
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A7S2PVE5_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PVE5_9DINO)

HSP 1 Score: 86.3 bits (212), Expect = 5.280e-16
Identity = 64/186 (34.41%), Postives = 93/186 (50.00%), Query Frame = 0
Query:   92 SPPIHRRFGQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIH--SVTGLPVAELKHLEHHMLQALAKDAYVSVRELNRYMG 275
            SPP+  R  + E  D   S+A  LEE  +  L   +A VL  LA+     LG R  + S+FH+A  P +++ +++ R+A    C + CL+L LVY+DRL     +    V+PL  HRL   S+++A KF         +D+FY   +   V G+ V EL  LE   LQ L     V   E   Y+G
Sbjct:   93 SPPVLPR-SEGEFHDPGASIAAMLEEAGQEGLVSALANVLSHLAS-----LGCRAHRASIFHAAQTPQISITDYLTRIARYYHCSDSCLVLGLVYIDRLVKLQPDF--VVSPLNVHRLLATSIMLAAKF--------HDDVFYSNKYYGKVAGVRVCELNRLEEKFLQMLKWHLCVLPDEYEEYLG 262          
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A5A7QWF6_STRAF (Cyclin n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QWF6_STRAF)

HSP 1 Score: 73.6 bits (179), Expect = 8.450e-12
Identity = 48/170 (28.24%), Postives = 85/170 (50.00%), Query Frame = 0
Query:  116 EEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLEHHMLQALAKDAYVSVRELNRYMGNFAHRHNEMV 285
            EE   A L G+++++LQ++A  N+L  G R +K SVFH  T P++++  +++R+     C   C ++  VY+DR     +   L +     HRL   S++++ KF+ +     +N+ +Y K   V G+   E+  LE   L  L     V+    + Y    +H   EM+
Sbjct:    6 EESRSAKLIGFVSLLLQRVAESNDLRCGARAQKMSVFHGLTRPTISIHSYLQRIFKYANCSTSCYIVAYVYLDRFT--HTHPTLKINSFNVHRLLITSVMLSAKFMDDM---YYNNAYYAK---VGGISTREMNILEVDFLFGLGFHLNVTPSTFHSYC---SHLQKEMM 164          
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A1Y1XV07_9FUNG (Cyclin-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XV07_9FUNG)

HSP 1 Score: 75.1 bits (183), Expect = 2.540e-11
Identity = 46/135 (34.07%), Postives = 79/135 (58.52%), Query Frame = 0
Query:  152 FHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLEHHMLQALAKDAYVSVRELNRY----MGNFAHRHN 282
            FHS+T+P++++  ++ R+ ++I   N CL++TL+Y+DR+A  +S  HL++   T HRL   S+ +A KF+ ++  S  N ++ +    V GLPV EL  LE  +L  L  +  +  RE + Y    M  F  +H+
Sbjct:   32 FHSSTVPAISIESYIRRIQSSIHFTNNCLLITLIYLDRIAQSTS--HLHINSYTIHRLLLTSITVANKFLNDE--SSPNSLYAK----VGGLPVRELNSLELELLFMLDFELNIQSREFHTYTHRLMSLFQRKHH 158          
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A7S4PH37_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PH37_9EUKA)

HSP 1 Score: 67.0 bits (162), Expect = 1.100e-9
Identity = 46/146 (31.51%), Postives = 78/146 (53.42%), Query Frame = 0
Query:  107 ELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLE 252
            +L++L  S  EE       +I  +  +L  +     GE  R+++ FH+   P +++ ++VERV     C   C ++ LVY++R+   SS+   ++ P+T HRLF ASL++A K+  +     FN+ FY +   V G+   EL  LE
Sbjct:    2 QLQTLPCSSLEE-------FIDALTTELGELIAFGAGETSRRETKFHALRAPIISLRQYVERVTTYAPCTVECFVVALVYLNRM---SSQKLGFINPMTIHRLFLASLLLAAKYYDDL---YFNNKFYAR---VGGISCKELNALE 131          
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A7S1SBT1_ALECA (Cyclin n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SBT1_ALECA)

HSP 1 Score: 65.5 bits (158), Expect = 2.470e-9
Identity = 46/156 (29.49%), Postives = 82/156 (52.56%), Query Frame = 0
Query:  121 ADLGGYIAVVLQKLANMNELFLGERG---RKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLEHHMLQALAKDAYVSVRELNRY 273
            AD G  ++ +   L+       G RG     +++FH+A  P+V V++++ER+   + C   CL++ LVY+DR+A   +E+   ++ LT HRL   ++++A KF   +  + F++  Y K   V G+ +AEL  LE    Q +    +V   +   Y
Sbjct:    5 ADAGQLVSALAVVLSVHCSRAAGGRGCDSMGRTLFHAAREPAVGVSDYLERIRRRLRCSKECLVMALVYLDRIAEADAEVA--ISNLTVHRLLLTAILVASKF---QDDNGFDNARYAK---VGGIGLAELNALERDFCQRVGWRLHVEPEQYGWY 152          
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A4D9DBM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBM6_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.170e-8
Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = 0
Query:  127 IAVVLQKLANMNELFLGERGRKKSV----FHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLE 252
            +  VLQKL ++N+      G   S     FH++  PS++VAE++ER+     C + CL+L L+Y+DRL   S+     +T L  HR+   ++++A KF  ++    FN+++Y K   V G+P  E+  LE
Sbjct:  421 LGCVLQKLLDVNKRGESAEGDGNSPTITKFHASRPPSISVAEYLERINKYASCSSECLVLALIYIDRLIQQSN---FALTALNVHRVLITAVMLAAKFFDDQ---YFNNLYYAK---VGGVPCKEINALE 541          
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: K8YPI9_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YPI9_NANGC)

HSP 1 Score: 66.2 bits (160), Expect = 1.730e-8
Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = 0
Query:  127 IAVVLQKLANMNELFLGERGRKKSV----FHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLE 252
            +  VLQKL ++N+      G   S     FH++  PS++VAE++ER+     C + CL+L L+Y+DRL   S+     +T L  HR+   ++++A KF  ++    FN+++Y K   V G+P  E+  LE
Sbjct:   16 LGCVLQKLLDVNKRGETAEGDGNSPTITKFHASRPPSISVAEYLERINKYASCSSECLVLALIYIDRLIQQSN---FALTALNVHRVLITAVMLAAKFFDDQ---YFNNLYYAK---VGGVPCKEINALE 136          
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A7S1B268_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1B268_NOCSC)

HSP 1 Score: 62.8 bits (151), Expect = 1.450e-7
Identity = 43/136 (31.62%), Postives = 67/136 (49.26%), Query Frame = 0
Query:  142 LGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELH--LYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIH--SVTGLPVAELKHLEHHMLQALAKDAYVSVRELNRY 273
            LG R    + FH+  +  V++ E++ R+     C + CL+L LVY+DR+     + H    V+ L  HRL   S+++A+KF          D+F+   H   V GL V+EL  LE   +Q L    +V   E + Y
Sbjct:  159 LGCRPHAATCFHAVRLSPVSIQEYLHRIVTWFPCSDECLVLGLVYIDRIV----KWHPGFVVSGLNIHRLLVTSIMLAVKF--------SEDVFFSNAHYAKVAGLSVSELNKLEQRFVQLLHWRLHVLPEEFHHY 282          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5KZ67_9PHAE3.370e-20997.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ63_ECTSI8.150e-9298.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2PVE5_9DINO5.280e-1634.41Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A5A7QWF6_STRAF8.450e-1228.24Cyclin n=1 Tax=Striga asiatica TaxID=4170 RepID=A0... [more]
A0A1Y1XV07_9FUNG2.540e-1134.07Cyclin-domain-containing protein n=1 Tax=Basidiobo... [more]
A0A7S4PH37_9EUKA1.100e-931.51Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A7S1SBT1_ALECA2.470e-929.49Cyclin n=1 Tax=Alexandrium catenella TaxID=2925 Re... [more]
A0A4D9DBM6_9STRA1.170e-833.85Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K8YPI9_NANGC1.730e-833.85Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S1B268_NOCSC1.450e-731.62Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 147..257
e-value: 1.0E-13
score: 52.0
NoneNo IPR availableGENE3D1.10.472.10coord: 109..285
e-value: 2.8E-21
score: 78.2
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 115..273
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 39..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 30..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..301
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..43
score: 0.468
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 167..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5712contigEcto-sp13_S_contig5712:3866..7407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5712.16103.1mRNA_Ecto-sp13_S_contig5712.16103.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5712 3270..7539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5712.16103.1 ID=prot_Ecto-sp13_S_contig5712.16103.1|Name=mRNA_Ecto-sp13_S_contig5712.16103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
MPTASMLAETRPPSSRKRPRSRAVQHVSKGAVLLLSLLQLTTARRPGGGG
YHYPSVPPQGYDSQDSSFDGGDWGDWRNQPIPGPNPHGMPFSPPIHRRFG
QPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKS
VFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLY
VTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKH
LEHHMLQALAKDAYVSVRELNRYMGNFAHRHNEMVPFIDRPYSGPPPFPF
Q*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR036915Cyclin-like_sf