mRNA_Ecto-sp13_S_contig5705.16087.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5705.16087.1
Unique NamemRNA_Ecto-sp13_S_contig5705.16087.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5705.16087.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 2.000e-68
Identity = 144/227 (63.44%), Postives = 167/227 (73.57%), Query Frame = 3 
Query:  864 ALFEAGADIDGPSRTGRSPLELAAQCCSYAAMLALLQLGANANSK-THRGTTPLYCACFHGRHDAVDLLLRSGADETIVDSEGETVTSMVIQRIAEAPEASRPQLERVSKLLERAPQDRAWRRRGFLILCRAHPDRVRLAVEIPAAAAEATEG-YERPRSRARTGQVTVGVEVDGTNGGGGGAVARSGARAGIEVVREGTVGGFDGVSAWMMALAEEGVSRRIVGFL 1538
            ALF+AG  I+G S  GR+PL+ AA C S  AMLALLQLGAN NSK T  G +PL  AC  G HDA DLLLR GADET VDS+ +T+ SM+  RI  A  ASR +LERVS+LL RAPQDRAWRRRGFL+ C +HPDRV+LAVEIP AA EA E   ERPR  ARTGQV V VE+DGTN        +SGAR G E +REGT GGF+G+SAWM+AL EE + R+I+GFL
Sbjct:  110 ALFKAGVYIEGRSPKGRTPLQNAAFCGSCEAMLALLQLGANVNSKNTINGLSPLCSACREGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVASRQRLERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQLAVEIPEAATEAIEQTQERPRRHARTGQVEVKVEMDGTNXXXXXXXXKSGAREGTESMREGTDGGFNGLSAWMIALTEEHLFRKIMGFL 336
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BLAST of mRNA_Ecto-sp13_S_contig5705.16087.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 4.490e-68
Identity = 180/265 (67.92%), Postives = 200/265 (75.47%), Query Frame = 2 
Query:   95 KLAQRTFLNSETRQTSSIMPGYEERASILQDHGDTVFKLVCDRAAREQWTERLRAPVEHAAATVNRDLIDKMLGAGASGSGSWRGCHGKTLLHAAAEGGNVQGIKRLHRAAAGRDIKANTLDSGHKPLDLAIAGGKRAAAKALIMAGADVDTLDAMNDGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAWHGLDEVVLALVHWS-ELRQQRTRYTTLPPWKCFWLK----------ALIPTPV*RCTRQRCQTKQP 856
            +LAQR FL+SE R TSSI+PGYEER+SILQD GDT FKLV DRA  +QW E LRAP+EHAAAT NRDL+DK+LGAGA+G   WRGCHGKTLLHAAAEGGNVQ I RL  A AG D+KA  LD+GH PLDLA+ GGK AAAKALIMAGA+V+ LDA NDG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A +GLDEVVLALV    +L    TR   +P   C  L+          AL PT    CT QR +T +P
Sbjct:   25 QLAQRNFLSSEVRHTSSIIPGYEERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDTGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACYGLDEVVLALVQKGVDLNCVNTR-GEIP--LCVALRGDHVATIKVLALTPTSDIFCTSQRARTNRP 286
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BLAST of mRNA_Ecto-sp13_S_contig5705.16087.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 9.480e-68
Identity = 156/272 (57.35%), Postives = 172/272 (63.24%), Query Frame = 3 
Query:  726 IGLNCVNNERDTPRCHHGSASG*RR*SQLRSSAVRGSGAKQSSRRRALFEAGADIDGPSRTGRSPLELAAQCCSYAAMLALLQLGANANSKTHRGTTPLYCACFHGRHDAVDLLLRSGADETIVDSEGETVTSMVIQRIAEAPEASRPQLERVSKLLERAPQDRAWRRRGFLILCRAHPDRVRLAVEIPAAAAEATEG-YERPRSRARTGQVTVGVEVDGTNGGGGGAVARSGARAGIEVVREGTVGGFDGVSAWMMALAEEGVSRRIVGFL 1538
            I LNC+NN+R+ P             + LR +A     A      R LFEAGADI+                    A L L QLGA  NSK +   T L  AC  G HDA  LLL  G DE  +DSEGETV  MV+Q+IAEAP + RP LER+S+LL RAPQDRAWRRRGFL+L R HPDRVRLAVEIP AAA+ATE   +RPR RA TGQ    VEVDGTNGGGG   A SG RAGIE V EGTV GF GVSAWMMAL EEGV RRIVGFL
Sbjct:  134 IDLNCLNNKREIPLLL----------ALLRIAACENKAAAI----RVLFEAGADIE--------------------ARLTLFQLGAKVNSKENERITSLSSACSFGNHDAAGLLLSWGGDENAMDSEGETVVFMVMQQIAEAPASVRPPLERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATEQPQQRPRRRASTGQ----VEVDGTNGGGGXTGASSGVRAGIEAVHEGTVAGFGGVSAWMMALTEEGVFRRIVGFL 367
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BLAST of mRNA_Ecto-sp13_S_contig5705.16087.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 7.680e-61
Identity = 154/191 (80.63%), Postives = 164/191 (85.86%), Query Frame = 2 
Query:  149 MPGYEERASILQDHGDTVFKLVCDRAAREQWTERLRAPVEHAAATVNRDLIDKMLGAGASGSGSWRGCHGKTLLHAAAEGGNVQGIKRLHRAAAGRDIKANTLDSGHKPLDLAIAGGKRAAAKALIMAGADVDTLDAMNDGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAWHGLDEVVLAL 721
            MPGYEERASILQD GDT+FKLVCDRA  EQW E LRAP+EHAA T NRDL+DK+LGAGA+    WRGCHGKTLLHAAAEGGNV  I  L RA AGRD+KA +LD+GH PLDLA+ GGK AAAKALIMAGADV+TLDA NDG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AWHGLDEVVLAL
Sbjct:    1 MPGYEERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVVLAL 191
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BLAST of mRNA_Ecto-sp13_S_contig5705.16087.1 vs. uniprot
Match: D7G292_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G292_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 1.170e-48
Identity = 120/211 (56.87%), Postives = 135/211 (63.98%), Query Frame = 3 
Query:  726 IGLNCVNNERDTPRCHHGSASG*RR*SQLRSSAVRGSGAKQSSRRRALFEAGADIDGPSRTGRSPLELAAQCCSYAAMLALLQLGANANSKTHRGTTPLYCACFHGRHDAVDLLLRSGADETIVDSEGETVTSMVIQRIAEAPEASRPQLERVSKLLERAPQDRAWRRRGFLILCRAHPDRVRLAVEIPAAAAEATEG-YERPRSRARTGQ 1355
            I LNC+N +R TP               L  + +R S  +Q +  RALFEAGADI+GP   GR+PL  AA+  SYAA+                      CACF   HDA DLLLR GADET V+ EGETV SMVI+RIAEA E   P LERVSKLL RAPQDRAWRRRGFL+LCRAH DRVRLAVEIP AAAEATEG  +RPR  ARTG+
Sbjct:  199 IDLNCLNYKRGTP---------------LHVAKIR-SAPEQRAAIRALFEAGADIEGPGIRGRTPLRHAARSGSYAAIXXXXXXXXXXXXXXXXXXXXXXCACFFCHHDAADLLLRWGADETAVNLEGETVVSMVIRRIAEALETRCPPLERVSKLLARAPQDRAWRRRGFLVLCRAHRDRVRLAVEIPVAAAEATEGPQQRPRCCARTGR 393
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BLAST of mRNA_Ecto-sp13_S_contig5705.16087.1 vs. uniprot
Match: A0A6H5JYJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ2_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 3.770e-37
Identity = 111/219 (50.68%), Postives = 128/219 (58.45%), Query Frame = 3 
Query:  885 DIDGPSRTGRSPLELAAQCCSYAAMLALLQLGANANSKTHRGTTPLYCACFHGRHDAVDLLLRSGADETIVDSEGETVTSMVIQRIAEAPEASRPQLERVSKLLERAPQDRAWRRRGFLILCRAHPDRVRLAVEIPAAAAEATEGYERPRSRARTGQVTVGVEVD-GTNGGGGGAVARSGARAGIEVVREGTVGGFDGVSAWMMALAEEGVSRRIVGFL 1538
            DI+  +    +PL   A   S AAML LLQLGAN NSK +RG                               +G+   S+VI+ +AE   AS P+LE VS+LL  APQDRAWRRRGF++L RA P+RVRLAVEIPA AAEATE  ++                  GT+ GGG A     ARAGIEVVREGTVGGFDGVSAWM ALAEE V RRIVGFL
Sbjct:  198 DIERRTSRESTPLHATAAFGSCAAMLTLLQLGANVNSKENRGKPR---------------------------PKGKAAISVVIRCMAETRAASLPRLEHVSELLVPAPQDRAWRRRGFVVLRRALPNRVRLAVEIPARAAEATEQPQQXXXXXXXXXXXXXXXXXXGTHRGGGRAGEXXXARAGIEVVREGTVGGFDGVSAWMTALAEEEVFRRIVGFL 389
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BLAST of mRNA_Ecto-sp13_S_contig5705.16087.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 7.380e-34
Identity = 77/137 (56.20%), Postives = 95/137 (69.34%), Query Frame = 2 
Query:  161 EERASILQDHGDTVFKLVCDRAAREQWTERLRAPVEHAAATVNRDLIDKMLGAGASGSGSWRGCHGKTLLHAAAEGGNVQGIKRLHRAAAGRDIKANTLDS-GHKPLDLAIAGGKRAAAKALIMAGADVDTLDAMND 568
            E+RA  L D    +FKL+CDRA  EQW E LRAP+EHAA T N+DL++K+L AGA GS  WRGC  KTLLHAAAEGGN + +  L RA AG D++A  L   G  PL +A+A GK AAA+ L++AGADV+  D   D
Sbjct:    9 EDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 145
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BLAST of mRNA_Ecto-sp13_S_contig5705.16087.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 1.270e-33
Identity = 73/138 (52.90%), Postives = 92/138 (66.67%), Query Frame = 2 
Query:  161 EERASILQDHGDTVFKLVCDRAAREQWTERLRAPVEHAAATVNRDLIDKMLGAGASGSGSWRGCHGKTLLHAAAEGGNVQGIKRLHRAAAGRDIKANTLDSGHKPLDLAIAGGKRAAAKALIMAGADVDTLDAMNDGP 574
            E+R  IL D  D +FKL+CDRA  EQWTE LRAP+EHAA T NRDL++K+L AGA GS  WRGC   TLLHAA        +  L RA AG D++A T  +G  PL +A+  G+ AAA+ L++AGADV+ +D   D P
Sbjct:    9 EDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGGTPLHVAVMRGQEAAARVLVLAGADVNAVDHNTDTP 146
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BLAST of mRNA_Ecto-sp13_S_contig5705.16087.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 6.000e-30
Identity = 71/137 (51.82%), Postives = 90/137 (65.69%), Query Frame = 2 
Query:  149 MPGYEERASILQDHGDTVFKLVCDRAAREQWTERLRAPVEHAAATVNRDLIDKMLGAGASGSGSWRGCHGKTLLHAAAEGGNVQGIKRLHRAAAGRDIKANTLDSGHKPLDLAIAGGKRAAAKALIMAGADVDTLDA 559
            M  +++R S L   GD +  LVCD A   QWT+ LR P+EHAA T N  L++K+L  GA+ S  WRGC G+TL+HA AEGG+ Q I  L RA AG+ I      SG  PL LA++GGK AA K L++AGADV+ LDA
Sbjct:    1 MSTHQDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLDA 137
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BLAST of mRNA_Ecto-sp13_S_contig5705.16087.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 4.760e-29
Identity = 73/138 (52.90%), Postives = 95/138 (68.84%), Query Frame = 2 
Query:  161 EERASILQDHGDTVFKLVCDRAAREQWTERLRAPVEHAAATVNRDLIDKMLGAGASGSGSWRGCHGKTLLHAAAEGGNVQGI-KRLHRAAAGRDIKANTLDSGH-KPLDLAIAGGKRAAAKALIMAGADVDTLDAMND 568
            E+RA IL D  D +F+L+CDRA  EQW E LRAP+EHAA T N+DL++K+L AGA+GS   RGC   TLLHAAAEGGN + +   L +A A  DI+A  +      PL +A+A GK AAA+A+++AGADV+  D   D
Sbjct:   11 EDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGD 148
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5705.16087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFY7_9PHAE2.000e-6863.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHQ7_ECTSI4.490e-6867.92F-box domain and ankyrin repeat protein n=1 Tax=Ec... [more]
A0A6H5JU78_9PHAE9.480e-6857.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2A3_ECTSI7.680e-6180.63Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7G292_ECTSI1.170e-4856.87Ankyrin repeat domain protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JYJ2_9PHAE3.770e-3750.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQP1_ECTSI7.380e-3456.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQP2_ECTSI1.270e-3352.90Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D7FM65_ECTSI6.000e-3051.82Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
A0A6H5JXY4_9PHAE4.760e-2952.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5705contigEcto-sp13_S_contig5705:2080..6590 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score229.2
Seed ortholog evalue1.9e-57
Seed eggNOG ortholog2880.D7G2A3
Model size3465
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
Exons2
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Cds size672
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463790.6229863-UTR-Ecto-sp13_S_contig5705:2079..39931681463790.6229863-UTR-Ecto-sp13_S_contig5705:2079..3993Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5705 2080..3993 -
1681463790.6339653-UTR-Ecto-sp13_S_contig5705:5039..57701681463790.6339653-UTR-Ecto-sp13_S_contig5705:5039..5770Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5705 5040..5770 -
1681463790.6519094-UTR-Ecto-sp13_S_contig5705:6442..65901681463790.6519094-UTR-Ecto-sp13_S_contig5705:6442..6590Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5705 6443..6590 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463790.643117-CDS-Ecto-sp13_S_contig5705:5770..64421681463790.643117-CDS-Ecto-sp13_S_contig5705:5770..6442Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5705 5771..6442 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5705.16087.1prot_Ecto-sp13_S_contig5705.16087.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5705 5771..6442 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5705.16087.1

>prot_Ecto-sp13_S_contig5705.16087.1 ID=prot_Ecto-sp13_S_contig5705.16087.1|Name=mRNA_Ecto-sp13_S_contig5705.16087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp
MPGYEERASILQDHGDTVFKLVCDRAAREQWTERLRAPVEHAAATVNRDL
IDKMLGAGASGSGSWRGCHGKTLLHAAAEGGNVQGIKRLHRAAAGRDIKA
NTLDSGHKPLDLAIAGGKRAAAKALIMAGADVDTLDAMNDGPLHHAIKGG
HVGIAKDLSLSGADPMQAGSNGDFPIHLAAWHGLDEVVLALVHWSELRQQ
RTRYTTLPPWKCFWLKALIPTPV*
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mRNA from alignment at Ecto-sp13_S_contig5705:2080..6590-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5705.16087.1 ID=mRNA_Ecto-sp13_S_contig5705.16087.1|Name=mRNA_Ecto-sp13_S_contig5705.16087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4511bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5705:2080..6590- (Ectocarpus species13 EcNAP12_S_4_19m)
AGATGTAGCATCGAGGTCACGCTACAGCAGTACTCCGCTTCCTAGCGTGC
ACACCACAGAGATACGTGGCTGGATTGGCATCTCCAACGATAATAAGCTC
GCCCAGAGGACCTTCTTGAACTCAGAAACGAGACAAACATCGTCTATCAT
GCCGGGTTACGAAGAGCGTGCAAGCATCCTGCAAGATCACGGGGACACGG
TATTCAAACTGGTGTGCGATAGGGCCGCACGCGAGCAGTGGACCGAGCGG
CTGAGGGCTCCTGTGGAGCATGCGGCAGCTACGGTAAACCGCGATCTGAT
AGATAAGATGCTGGGAGCCGGGGCCAGTGGCAGTGGCAGCTGGCGGGGTT
GTCATGGCAAGACGCTGCTGCATGCGGCGGCTGAGGGCGGTAACGTGCAA
GGCATCAAGAGATTGCACAGGGCGGCGGCAGGGCGAGACATCAAAGCGAA
CACCCTCGACAGTGGGCATAAACCCCTGGATCTAGCGATTGCTGGCGGGA
AGAGGGCTGCTGCGAAGGCGCTGATCATGGCTGGGGCGGACGTGGACACG
CTCGACGCCATGAATGACGGCCCACTGCACCACGCGATCAAAGGGGGCCA
TGTGGGAATTGCGAAGGACCTGTCGCTGAGCGGCGCCGATCCTATGCAGG
CAGGATCGAACGGTGACTTCCCCATCCACCTCGCCGCTTGGCACGGTCTA
GACGAGGTGGTGTTGGCATTGGTCCATTGGTCTGAATTGCGTCAACAACG
AACGAGATACACCACGTTGCCACCATGGAAGTGCTTCTGGCTGAAGGCGC
TGATCCCAACTCCGGTCTAGCGCTGTACGAGGCAGCGGTGCCAAACAAAG
CAGCCGCAGACGAGCTCTTTTCGAAGCTGGGGCCGATATCGATGGTCCTA
GTCGGACGGGACGAAGTCCCCTGGAACTCGCAGCACAGTGTTGCTCGTAT
GCAGCCATGCTGGCTCTCCTGCAACTGGGGGCCAACGCCAACTCGAAGAC
CCACAGAGGAACAACCCCGTTGTACTGCGCGTGTTTTCACGGCCGTCACG
ACGCGGTAGACCTGTTGTTGAGATCGGGTGCGGACGAGACGATCGTGGAC
TCAGAGGGAGAGACCGTCACCTCCATGGTAATACAACGCATCGCTGAAGC
TCCCGAAGCTTCTCGCCCGCAGCTTGAGCGTGTTTCCAAGCTTCTGGAAC
GTGCTCCGCAGGACAGGGCCTGGCGTCGCCGGGGCTTCCTCATCCTTTGC
CGTGCCCACCCAGACAGGGTGCGGCTGGCAGTGGAGATCCCTGCAGCAGC
AGCTGAGGCTACCGAGGGGTATGAACGCCCAAGAAGCCGTGCTAGGACGG
GGCAGGTGACGGTCGGGGTGGAGGTGGATGGGACGAACGGAGGCGGTGGT
GGAGCAGTCGCGAGGAGTGGCGCTCGTGCCGGCATTGAAGTTGTCCGTGA
AGGCACCGTCGGTGGGTTCGATGGTGTGTCGGCGTGGATGATGGCACTGG
CAGAGGAGGGCGTGTCCCGCAGGATCGTGGGGTTCCTGTAGTGGGTTGAA
GGTCAGTCTGATCGGCCCGTTCCAGTGAGGTGTTTGTTGTTGTTGCTCGA
AGCGATGGCGTGGGCGTTGTGTCTCACTGTCCTATGTGTATACACAGGCA
GGCACCTTGATTTAGTTAGTTGTAGGTACCACAGCAGGACAAGCGTCCGA
CCTTAAGGCGTCATCTATATCATATTGTTTTGTCGCGACAAGTTCTGGAC
GGCACGTGCACCACGCACAAATTCAACCGAGTACACGCACGATTTGAGCG
GGTTGTGTGCACGGGTGTTACCCTTCCCGCTGTTACTTCTTCCTCCACCG
CTTGCTCGATTGTACTACTGTAGTAGAACCCCCCTCTCCCGTCCTTCCCC
TCAACTCTTCGTTGCCAGCATAGACTGGGGAAGAACTACCGAATGTCGCG
AATCGCCATTATCCTTTTCTTGCTTATGCCGGTGTCCAAACCATGTTTTG
TCTGTGATCAATGTAACCGTGTATTGTTTGTTTGATGGGTGTCCTGAATG
TGCTCGCTGTGTTTGGTTGCGTCATCTCATGTATTCTGTACATCGCTCCT
TACACCTTCCGGTGCCATTGTGGACGGACCGGTCGTGGTCAGGCAGGAGA
AAGGCCACACAGGAATTAAGTTCTCCGCTTCTCTTCTGCGGTGCTTGCCG
TGATTATTGCCGCGAGAAGGATTCAGCTGTTCCTTTCCCTCGTCCACCGT
GAATTCGAAGTTCTGCGTACACACGGACTGATCTCTTTCCACATTGTTTG
GGCATGTTGTGAAAAGAATCCTTCAGCAGTAGTTCGTGTGACTCTCCCGA
GATTTGGACCCACGTCAGAAGGTTGCGAGGTTACCTACTGAATTCAGTCA
CGTTGTGTGACCGTGCTAATTTATATAGCGTTAACTAGAATGAAGAGCAA
AACATGCCGTTGCCTTTTGGTCGAACGGAGTCTTTCGTCTGCAACAAAAC
TAACATCTCGAGTGTTTCCCTGTCTATGCCACCTCCTCTCGTCCACGCGT
GCTCTTTGCGAAAATGTGTTTCGGACATCAACATCCACGCGTGGCAGCGT
GCTCTGGATGATCAATGGTGAAGCATCTCGTGACCGCAAGCAGAAGCTTC
TTCTCTCTCAAGATCGTTGGAACGTTGTCATGGGCTGGGTGTTTTCTAGG
CGTGCCTCGATCGATCCCAACGTACGTATTCCAGCTCTGGTCAACCCCGC
ACCCTGTTGCTGCACCCACGCGACATGATTACATCGTTTCAGCCGGTCTC
TGTCATTTCTGGGTTGATTTCTGCTCTCCATATCTTTGTGCGATTAGTTG
TCCAGCTTTGCAGTTCTCACTTCGCAAGGCGTGGACAGCTATGCCTTCTT
CTTGGGTTCCTGGAGCAAAGAGTTGCGTCGAAGAGTTCGTGTCATACTCC
CAGTTGGAAAACTTCTCTCTTTCACTTGGTTTTGCGGGTAACATGTTTGG
CATCTCCTGGTCTGTACTCTGTTTATCCTTGCAGTGAATGGGTGGTTGAG
GCTCTTGAGACCCCTGGAGGCTTTACCACCCTCCTTCAAACACGTGTTCC
GTGGTCATATCTACATGCTTTTCTGTTGTTGCTGTCTTGTGTGTGCTTTT
GCCATGATGTCGTTCGTGACGGGTTATCTCGTTAGCGTAGGTTAGGCCGT
CTTAGTGTGCTTGGGCGATCCCCCTTCTTTTACCTTCTCCCCTCCTTCTC
TGGCGATTGTTTACTTTATGTTGTGACGGCGTATGTATGTGTTCGTTTCT
TCAATGCTAGCTGATCGTTTGATTGGTGCTGGTCTATTGCCCACCTGACC
ACCACCCCTCCACTTTGAATTTATGCAGCGTTACGAGAGGTCAGTCATTG
AGGCTAGTTTGAACAAGCGATGAAGAACAGATTGTACCAGTTTGTTGCTT
TGTGTTTTGTATCGGTACAGATTATGGGGGACGGGGGGATTTTGTCCGGC
TGCGGGAGAGCTCTTCGTCCCTGGGAAGAAGCGAAACTGCGGTAGCTGTA
GGTTGCGGTTACGGTTCTCTTCGGCTTCATCGGATGCAGTACAAGACAAC
AGGGTGCATGTTGAAGGGGGATAGCGAGCATGGTCAGGCTCATGACGGAT
TGTGTGAGTGAGTGAGTTCGTAGCCAGGTTGCCGTGACTCTATGTGGACC
CGATGCGAGGCTGGGTGACTGCTGGCCTCTGGTGTTACGAGCTCTGAGCT
GTGTACTGGGCAATGTCAGGGAGCTTTGTTTCGAAGTTTGTTGTCTCCGG
CACTACTTTCCTTCGTTCCCGGTGTCTTTGTTTGCCGTTGGCATGGGCAA
AGAGAAGGTCACTATTTTCATTCGTTGTTTTTTTTGGTCGTCAAATTGTC
AACCCTAGTGAGCTGGACAGGGTTTGCCTTAGGACGCGCGCCGAATACTT
GCCCATTTCGCGTACAATATCATCGATGCTTTCTTCGCCGTCTGAGATCC
TTGTGGTGGTGGTGCTGGGATGGTGCTGTCGTTCCTTGCGGTGCGCACGA
ACGCACGAATAGCTAGTGCCGGCCATTATTTTGAATGTGTTGGCTAGAAA
CGCTTGTGTTCAGGATAGTGGCATCGCGGGGTGTTTTCCACTCATCGTTC
TTTTCTGGCTCTTTGGCCGCAATGTCCAGCGTTCGGAGCGGTAGGAGTGC
TCCCTGTTGAGTGTCTCGTCAATTCTCGGGTGTTTGGGGGTACTCGTCGT
TTCATCCGCATCATCCACCCGATCCGTTCGCGCTGTTGAAGGTTACCACC
GTTGACTTTCGTGCCGCGACCACTGTGTTGTGTCCTACATGCGATGATGA
TGTAGGTCGCAGGTGATGTGTTGTGAATTTTGTGTGGCTGCTCTAGCCCT
TCTGGGAAAAAATAGGATATGGGAGCGTTCTGAAGATGAACGTGTCTTGT
TTACACGACGGCTATCACTGCTGTGTTCAGATATCAAATCAATTGGATCA
CGCAAACCTCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5705:2080..6590-

>mRNA_Ecto-sp13_S_contig5705.16087.1 ID=mRNA_Ecto-sp13_S_contig5705.16087.1|Name=mRNA_Ecto-sp13_S_contig5705.16087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5705:2080..6590- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGGGTTACGAAGAGCGTGCAAGCATCCTGCAAGATCACGGGGACAC
GGTATTCAAACTGGTGTGCGATAGGGCCGCACGCGAGCAGTGGACCGAGC
GGCTGAGGGCTCCTGTGGAGCATGCGGCAGCTACGGTAAACCGCGATCTG
ATAGATAAGATGCTGGGAGCCGGGGCCAGTGGCAGTGGCAGCTGGCGGGG
TTGTCATGGCAAGACGCTGCTGCATGCGGCGGCTGAGGGCGGTAACGTGC
AAGGCATCAAGAGATTGCACAGGGCGGCGGCAGGGCGAGACATCAAAGCG
AACACCCTCGACAGTGGGCATAAACCCCTGGATCTAGCGATTGCTGGCGG
GAAGAGGGCTGCTGCGAAGGCGCTGATCATGGCTGGGGCGGACGTGGACA
CGCTCGACGCCATGAATGACGGCCCACTGCACCACGCGATCAAAGGGGGC
CATGTGGGAATTGCGAAGGACCTGTCGCTGAGCGGCGCCGATCCTATGCA
GGCAGGATCGAACGGTGACTTCCCCATCCACCTCGCCGCTTGGCACGGTC
TAGACGAGGTGGTGTTGGCATTGGTCCATTGGTCTGAATTGCGTCAACAA
CGAACGAGATACACCACGTTGCCACCATGGAAGTGCTTCTGGCTGAAGGC
GCTGATCCCAACTCCGGTCTAG
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