prot_Ecto-sp13_S_contig5702.16083.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5702.16083.1
Unique Nameprot_Ecto-sp13_S_contig5702.16083.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length240
Homology
BLAST of mRNA_Ecto-sp13_S_contig5702.16083.1 vs. uniprot
Match: D8LBC0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBC0_ECTSI)

HSP 1 Score: 466 bits (1198), Expect = 3.070e-163
Identity = 232/239 (97.07%), Postives = 234/239 (97.91%), Query Frame = 0
Query:    1 MTTLVLDMGSAMEQFDMGDAFVGAWDIANLVSDFLMEKMGAETSGCSAKAPKTLPSAGSDAFRLTSDKVEQMQTDLTSDFARYRFLLDLMEGNTDWEQANTIMAVYQGYPVEGEEEEEGGRPGVRQGWLAAFPGATPPDLSSAEGLVEALQADFPDDPDLLDGLEVIVETVYGGEAKRLHQGDPDNGVPPEPLYLRRSTLCKWLYLVGFLSDDIKRAPDDPEQLAELISGRARLKHQKK 239
            MTTLVLDMGSAMEQFDMGDAFVGAWDIANLVSDFLMEKMGAETSGCSAKAPKTLPSAGSDAF LTSDK EQMQ DLTSDFARYRFLLDLMEGNTDWEQANTIMAVYQGYPVEGEEEEE GRPGVR+GW A+FPGATPPDLSSAEGLVEALQADFPDDPDLLDGLEVIVETVYGGEAKRLHQGDPDNGVPPEPLYLRRSTLCKWLYLVGFLSDDIKRAPDDPEQLAELISGRARLKHQKK
Sbjct:  159 MTTLVLDMGSAMEQFDMGDAFVGAWDIANLVSDFLMEKMGAETSGCSAKAPKTLPSAGSDAFCLTSDKAEQMQADLTSDFARYRFLLDLMEGNTDWEQANTIMAVYQGYPVEGEEEEESGRPGVRRGWSASFPGATPPDLSSAEGLVEALQADFPDDPDLLDGLEVIVETVYGGEAKRLHQGDPDNGVPPEPLYLRRSTLCKWLYLVGFLSDDIKRAPDDPEQLAELISGRARLKHQKK 397          
BLAST of mRNA_Ecto-sp13_S_contig5702.16083.1 vs. uniprot
Match: A0A7S2UZ53_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ53_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.470e-20
Identity = 75/246 (30.49%), Postives = 119/246 (48.37%), Query Frame = 0
Query:    4 LVLDMGSAMEQFDMGDAFVGAWDIANLVSDFLMEKMGA-ETSGCSAKAPKTLPSAGS---------DA-------FRLTSDKVEQMQTDLTSDFARYRFLLDLMEGNTD----WEQANTIMAVYQGYPVEGEEEEEGGRPGVRQGWLAAFPGATPPDL---SSAEGLVEALQADFPDDPDLLDGLEVIVETVYGGEAKRL--HQGDPDNGVPPEPLYLRRSTLCKWL----YLVGFLSDDIKRAPD 219
            +V+ +G A+E+ DMGDA+VGAWD+ANL SDFLM+++   E  GCSA +    P             DA       +  T + VE+    +++++ RY F  + +E + D    W   +TI+A+   Y          G   V + W   +P   PP++         +E L+ D+P++PD LD L+  ++ +YG EA +L    GD +        + +R T+ KWL    +L  F  D  K   D
Sbjct:  107 VVVAVGEALEKVDMGDAYVGAWDVANLCSDFLMQRLDDHEPIGCSAVSSVPFPGEEEGISSSEEEDDAVEPTALKWMFTKEAVEETTEAMSTNWRRYLFQQNFLEPSEDEAMTWPHMSTIVAMLLNYKPPTTPGGPVGTEDVEERWREGYP--EPPNVFLEKDNTAFLEMLELDYPENPDDLDFLDEFIDQLYGMEAHKLACKSGDVE--------FSQRRTIVKWLQDRNFLASFPPDPAKNGRD 342          
BLAST of mRNA_Ecto-sp13_S_contig5702.16083.1 vs. uniprot
Match: A0A835Z1S2_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.020e-14
Identity = 38/81 (46.91%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    4 LVLDMGSAMEQFDMGDAFVGAWDIANLVSDFLMEKMGAETSGCSAKAPKTLPSAGSDAFRLTSDKVEQMQTDLTSDFARYR 84
            L++D+G+ +E FDMGDAFVG WD+ANLVSDF++ +MG E + CS K P+ + + G   F  T++ V  +Q +L  +F R R
Sbjct:   73 LIMDVGTTLESFDMGDAFVGGWDVANLVSDFMLARMGLERACCSTKLPEGISATGDTVF-ATAESVSSLQRELHGEFERPR 152          
BLAST of mRNA_Ecto-sp13_S_contig5702.16083.1 vs. uniprot
Match: A0A7S2B2L4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B2L4_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 7.310e-8
Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    1 MTTLVLDMGSAMEQFDMGDAFVGAWDIANLVSDFLMEKMGAETSGC 46
            +T++++ +G  ME+ DMGDAFVG WD+AN  SD LM +MG ET  C
Sbjct:   27 LTSVMMYLGEVMEKTDMGDAFVGPWDVANACSDLLMARMGRETCDC 72          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5702.16083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBC0_ECTSI3.070e-16397.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UZ53_9STRA3.470e-2030.49Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z1S2_9STRA2.020e-1446.911,3-beta-glucan synthase n=1 Tax=Tribonema minus T... [more]
A0A7S2B2L4_9STRA7.310e-854.35Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5702contigEcto-sp13_S_contig5702:456..2202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5702.16083.1mRNA_Ecto-sp13_S_contig5702.16083.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5702 261..2370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5702.16083.1 ID=prot_Ecto-sp13_S_contig5702.16083.1|Name=mRNA_Ecto-sp13_S_contig5702.16083.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=240bp
MTTLVLDMGSAMEQFDMGDAFVGAWDIANLVSDFLMEKMGAETSGCSAKA
PKTLPSAGSDAFRLTSDKVEQMQTDLTSDFARYRFLLDLMEGNTDWEQAN
TIMAVYQGYPVEGEEEEEGGRPGVRQGWLAAFPGATPPDLSSAEGLVEAL
QADFPDDPDLLDGLEVIVETVYGGEAKRLHQGDPDNGVPPEPLYLRRSTL
CKWLYLVGFLSDDIKRAPDDPEQLAELISGRARLKHQKK*
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