mRNA_Ecto-sp13_S_contig57011.16082.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig57011.16082.1 vs. uniprot
Match: A0A6H5KLW2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLW2_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 4.500e-26 Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 1
Query: 1 MGIMDDFCAGHQRLKERIHNFRMPLSRPGRIAMSIVYFSIPVVGGYYLM 147
MGIMDDF AGHQRLKERIHNFR+PLSRPGRIAMSIVYFSIPVVGG+YLM
Sbjct: 1 MGIMDDFSAGHQRLKERIHNFRIPLSRPGRIAMSIVYFSIPVVGGHYLM 49
BLAST of mRNA_Ecto-sp13_S_contig57011.16082.1 vs. uniprot
Match: A0A2D4BV99_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV99_PYTIN) HSP 1 Score: 66.6 bits (161), Expect = 4.100e-13 Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 1 MGIMDDFCAGHQRLKERIHNFRMPLSRPGRIAMSIVYFSIPVVGGYYLM 147
+ + D A H+RLK+R+H FR+PLS+ G+ AM +VYFSIPV+GGY++M
Sbjct: 2 LSFLRDIGAAHERLKKRVHAFRIPLSKNGQRAMGVVYFSIPVIGGYFVM 50
BLAST of mRNA_Ecto-sp13_S_contig57011.16082.1 vs. uniprot
Match: A0A8K1CHE5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHE5_PYTOL) HSP 1 Score: 66.6 bits (161), Expect = 4.100e-13 Identity = 27/41 (65.85%), Postives = 38/41 (92.68%), Query Frame = 1
Query: 25 AGHQRLKERIHNFRMPLSRPGRIAMSIVYFSIPVVGGYYLM 147
A H+RLK+RIH+FR+PLS+ G+ AMS+VYFS+PV+GGY++M
Sbjct: 11 AAHERLKKRIHSFRIPLSKNGQRAMSVVYFSVPVIGGYFVM 51
BLAST of mRNA_Ecto-sp13_S_contig57011.16082.1 vs. uniprot
Match: A0A024UAW9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UAW9_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 1.180e-10 Identity = 23/49 (46.94%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 1 MGIMDDFCAGHQRLKERIHNFRMPLSRPGRIAMSIVYFSIPVVGGYYLM 147
MG++ DF H+RLK+RIH+ R+PL G+ M++VYF+ P++ GY++M
Sbjct: 1 MGVVRDFLDAHERLKKRIHSTRIPLGPKGKAVMTVVYFTTPIICGYFVM 49
BLAST of mRNA_Ecto-sp13_S_contig57011.16082.1 vs. uniprot
Match: A0A6G0WXS0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXS0_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.520e-10 Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 1 MGIMDDFCAGHQRLKERIHNFRMPLSRPGRIAMSIVYFSIPVVGGYYLM 147
MG+ DF H+RLK+RIH+ R+PL G+ M++VYF+ P++ GY++M
Sbjct: 1 MGVFRDFLDAHERLKKRIHSTRIPLGPKGKAVMTVVYFTTPIICGYFVM 49
BLAST of mRNA_Ecto-sp13_S_contig57011.16082.1 vs. uniprot
Match: A0A6A4Z7Q6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z7Q6_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 6.130e-10 Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 1 MGIMDDFCAGHQRLKERIHNFRMPLSRPGRIAMSIVYFSIPVVGGYYLM 147
MG+ DF H+RLK+RIH+ R+PL G+ M+ VYF+ P+V GY++M
Sbjct: 12 MGVFRDFVDAHERLKKRIHSTRIPLGPKGKAVMTAVYFTTPIVCGYFVM 60
BLAST of mRNA_Ecto-sp13_S_contig57011.16082.1 vs. uniprot
Match: A0A835YNY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNY3_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 1.870e-9 Identity = 24/44 (54.55%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 16 DFCAGHQRLKERIHNFRMPLSRPGRIAMSIVYFSIPVVGGYYLM 147
D H+ LK+RIHNFR+PLS G++AM +VYF++P VGG +M
Sbjct: 2 DLRGRHEALKKRIHNFRIPLSPRGQLAMQVVYFTVPFVGGMAIM 45
BLAST of mRNA_Ecto-sp13_S_contig57011.16082.1 vs. uniprot
Match: T0R506_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R506_SAPDV) HSP 1 Score: 55.1 bits (131), Expect = 1.270e-8 Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 1
Query: 1 MGIMDDFCAGHQRLKERIHNFRMPLSRPGRIAMSIVYFSIPVVGGYYLM 147
MG + D H RLK+RIH R+PLS G M +VYF+ P++GGY++M
Sbjct: 1 MGWLRDLGDAHTRLKKRIHGTRIPLSPAGIRFMKVVYFTTPIIGGYFVM 49
BLAST of mRNA_Ecto-sp13_S_contig57011.16082.1 vs. uniprot
Match: A0A3M6VCE9_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCE9_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.840e-8 Identity = 21/39 (53.85%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 31 HQRLKERIHNFRMPLSRPGRIAMSIVYFSIPVVGGYYLM 147
HQ LK++IH+ R+PLS G+ M++VYF+ P++GGYY+M
Sbjct: 11 HQELKQKIHSTRIPLSNNGQRVMALVYFTAPIIGGYYVM 49
BLAST of mRNA_Ecto-sp13_S_contig57011.16082.1 vs. uniprot
Match: A0A397ALX0_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ALX0_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 4.750e-8 Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 1
Query: 1 MGIMDDFCAGHQRLKERIHNFRMPLSRPGRIAMSIVYFSIPVVGGYYLM 147
MG+ D H+RLK+RIH+ R+PL G+ M+ VYF+ P+V GY++M
Sbjct: 1 MGVFRDIVDAHERLKKRIHSTRIPLGPKGKAVMTAVYFTTPIVCGYFVM 49 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57011.16082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig57011.16082.1 >prot_Ecto-sp13_S_contig57011.16082.1 ID=prot_Ecto-sp13_S_contig57011.16082.1|Name=mRNA_Ecto-sp13_S_contig57011.16082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=49bp MGIMDDFCAGHQRLKERIHNFRMPLSRPGRIAMSIVYFSIPVVGGYYLMback to top mRNA from alignment at Ecto-sp13_S_contig57011:3..149- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig57011.16082.1 ID=mRNA_Ecto-sp13_S_contig57011.16082.1|Name=mRNA_Ecto-sp13_S_contig57011.16082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=147bp|location=Sequence derived from alignment at Ecto-sp13_S_contig57011:3..149- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig57011:3..149- >mRNA_Ecto-sp13_S_contig57011.16082.1 ID=mRNA_Ecto-sp13_S_contig57011.16082.1|Name=mRNA_Ecto-sp13_S_contig57011.16082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=147bp|location=Sequence derived from alignment at Ecto-sp13_S_contig57011:3..149- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |