prot_Ecto-sp13_S_contig570.16076.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig570.16076.1
Unique Nameprot_Ecto-sp13_S_contig570.16076.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length387
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig570.16076.1 vs. uniprot
Match: D7FWS3_ECTSI (Similar to S-antigen protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS3_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 1.300e-69
Identity = 252/344 (73.26%), Postives = 260/344 (75.58%), Query Frame = 0 
Query:   63 GTVTCASYFDA-SEGTLCDDGYVPIAGGNTIACDRACVTATCCEG---------------------------------------------SDTPAPTAVSTPAPTTASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRVGTVTCDSHVNLAGRTLCDEGYVPIAGGDTIACDTACDVATCCQASDTPAPTPRSALSTPVPNTASHMPGPTADPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVLTCDSYVELIGLGPLCQEGSERIPGGDTIECGTTCDAEMYCQAIGTVTCASYVDASKGT 360
            G +TC SY +    G LC +G   I GG+TI C   C  ATCC+                                              +DTP PTAVSTPAPTTASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRVGTVTCDS+VN AGR LCDEGYVPIAGGDTI CDT CDVATCCQASDTPAPT R A+STP   TAS  PGPT DPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVLTCDSYVE IG GPLCQEGSERIPGGDTIECGTTCDA   CQAIGTVTCASYVDAS GT
Sbjct:  318 GVLTCDSYVEPIGWGPLCQEGSERIPGGDTIECGTTCDAATCCQAIGTVTCASYVDASGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTPTPTAVSTPAPTTASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRVGTVTCDSYVNFAGRPLCDEGYVPIAGGDTIECDTVCDVATCCQASDTPAPTSRPAVSTPXXXTASPTPGPTTDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVLTCDSYVEPIGWGPLCQEGSERIPGGDTIECGTTCDAATCCQAIGTVTCASYVDASGGT 661
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig570.16076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWS3_ECTSI1.300e-6973.26Similar to S-antigen protein n=1 Tax=Ectocarpus si... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig570contigEcto-sp13_S_contig570:126..5320 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig570.16076.1mRNA_Ecto-sp13_S_contig570.16076.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig570 126..8533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig570.16076.1 ID=prot_Ecto-sp13_S_contig570.16076.1|Name=mRNA_Ecto-sp13_S_contig570.16076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=387bp
MYGFRRVLYSGFRRHLVHNARPRAVAGTFIPPNTRQQRNDLLLMLTLALR
HRHYFGVLFRVVGTVTCASYFDASEGTLCDDGYVPIAGGNTIACDRACVT
ATCCEGSDTPAPTAVSTPAPTTASPTPGPTPGPTPSPTTAPPTPGPTTDP
TPSPTTASPIRVGTVTCDSHVNLAGRTLCDEGYVPIAGGDTIACDTACDV
ATCCQASDTPAPTPRSALSTPVPNTASHMPGPTADPTPSPTTASPTPGPT
ADPTPSPTTVPPTPGPTMDPTPSPRTASPTPGRTADPTPSWTTASPAPAG
VLTCDSYVELIGLGPLCQEGSERIPGGDTIECGTTCDAEMYCQAIGTVTC
ASYVDASKGTLCEDGYVPIVGGNIIECDRSCNAVTCC
back to top