prot_Ecto-sp13_S_contig569.16062.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig569.16062.1
Unique Name	prot_Ecto-sp13_S_contig569.16062.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	762

Homology

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BLAST of mRNA_Ecto-sp13_S_contig569.16062.1 vs. uniprot
Match: A0A6H5JR84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR84_9PHAE)

HSP 1 Score: 765 bits (1976), Expect = 3.770e-267
Identity = 619/765 (80.92%), Postives = 631/765 (82.48%), Query Frame = 0

Query:    1 MGSKAEEPGREEESIDIHQAVAHNREDQIKQYVDAGGDLDRRDGNNLAPLHIAAAGGFCNVVEFLLKHKAGVDVTSKIGHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVANEDNVKAGETFLPEVPEAQQGQIKVLLKERQPLLMKGYEAARRNMALMYMRSERSDLNLRMSQGEVETLWGKLAKREKELNMSKMGARDLSHAVKAMKSALEQGRNDAKAMREKLVALETELNDXXXEAQXQRERAARAERAYATLLEGGRGRASSCEGDDEHARSSTLQRELQAEEEGGGVEKSSVKVGGLTQSYSKDGAPEWKWLGNCPKDGKRSPGSSISSPPPLLPRVSSAATNSLDPTWHFDPSPILSSGIVSVQAVGSTASSPVHTSEFPEPGRIAALASRIETRKASPDDKRGGSNLTSPVLATVPG-IPGKTDVGPLATALPLPTLAATTAAGPALRSRSNSGRWVMKRCSSSTSLTPDPTDGGLADGGIGGGSGSCSAXXXXXXXSRNCGVLXXXXXXXXXXXQKEDGGVAPAVPRNAPRPAGPAAAGKDDDALASPAS--WEQGGKRRPALLGKSSGGRSISSSSSFGSDDSGFCSALGSRSPDAGSVPPKGGRAGGGGGVGDEPL-MHSKDQQVPSQIDGGEEGGVGGSRCSEATLPASPDKGGGCG 761
            MGSKAEEPG    SIDIH AVAHNREDQIKQYVDAGGDLD+RDGNNLAPLHIAAAGGFCNVVEFLLKHKAGVDVTSKIGH+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVANE+NVKAGETFLPE+PEAQQGQIKVLLKERQPLLMKGYEAARRNMALMYMRSERSDLNLRMSQGEVETLWGKLAKREKELNMSKMGARDLSHAVKAMKSALEQGRNDA                XXX   X    AARAER+YA LLE GR R SSCE D E ARSSTLQR+LQAEEEGG VEKSSVKVGGLTQSYSKDGAPEWKWLGNCPKDGKRSPGSSISSPPPLLPRVSSAATNSLDPTWHFDPSPILSSGI+SVQA GSTASSPV TSEFPEPGRIAALASRIETR ASP +K GGS L SPV A VPG +PGKTDVGPLATALPLPTLAATTAAGPALRSRSNSGRWVMKRCSSSTSLTP+PTDGG ADG IG GSGSCSA   XXXX       XXXXXXXXXXX                                      WEQGGKR PALLG             FGSDDS FCSALGSRSPDA SVPPKG               M SKDQQV S ++GGEEGGV  S CSEATLPASPDKGGGCG
Sbjct:    1 MGSKAEEPGGGGGSIDIHLAVAHNREDQIKQYVDAGGDLDKRDGNNLAPLHIAAAGGFCNVVEFLLKHKAGVDVTSKIGHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVANEENVKAGETFLPEIPEAQQGQIKVLLKERQPLLMKGYEAARRNMALMYMRSERSDLNLRMSQGEVETLWGKLAKREKELNMSKMGARDLSHAVKAMKSALEQGRNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXAARAERSYAMLLEKGRRRVSSCERDGEEARSSTLQRDLQAEEEGGRVEKSSVKVGGLTQSYSKDGAPEWKWLGNCPKDGKRSPGSSISSPPPLLPRVSSAATNSLDPTWHFDPSPILSSGIISVQA-GSTASSPVLTSEFPEPGRIAALASRIETRHASPKEKNGGSTLASPVPAIVPGNVPGKTDVGPLATALPLPTLAATTAAGPALRSRSNSGRWVMKRCSSSTSLTPEPTDGGPADGRIGAGSGSCSAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEQGGKRWPALLGXXXXXXXXXXXXXFGSDDSEFCSALGSRSPDAESVPPKGXXXXXXXXXXXXXXXMLSKDQQVRSPVNGGEEGGVSSSSCSEATLPASPDKGGGCG 764

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BLAST of mRNA_Ecto-sp13_S_contig569.16062.1 vs. uniprot
Match: D7FY56_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY56_ECTSI)

HSP 1 Score: 642 bits (1657), Expect = 6.720e-221
Identity = 508/559 (90.88%), Postives = 512/559 (91.59%), Query Frame = 0

Query:    1 MGSKAEEPGREEESIDIHQAVAHNREDQIKQYVDAGGDLDRRDGNNLAPLHIAAAGGFCNVVEFLLKHKAGVDVTSKIGHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVANEDNVKAGETFLPEVPEAQQGQIKVLLKERQPLLMKGYEAARRNMALMYMRSERSDLNLRMSQGEVETLWGKLAKREKELNMSKMGARDLSHAVKAMKSALEQGRNDAKAMREKLVALETELNDXXXEAQXQRERAARAERAYATLLEGGRGRASSCEGDDEHARSSTLQRELQAEEEGGGVEKSSVKVGGLTQSYSKDGAPEWKWLGNCPKDGKRSPGSSISSPPPLLPRVSSAATNSLDPTWHFDPSPILSSGIVSVQAVGSTASSPVHTSEFPEPGRIAALASRIETRKASPDDKRGGSNLTSPVLATVPG-IPGKTDVGPLATALPLPTLAATTAAGPALRSRSNSGR 558
            MGSKAEEPG    SIDIHQAVAHNREDQIKQYVDAGGDLDRRDGNNLAPLHIAAAGGFCNVVEFLL HKAGVDVTSKIGHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVANEDNVKAGETFLPEVPEAQQGQIKVLLKERQPLLMKGYEAARRNMALMYMRSERSDLNLRMSQGEVETLWGKLAKREKELNMSKMGARDLSHAVKAMKSALEQGRND                 XXX   X      RAER+YATLLE GRGRASSCEGD E  RSSTLQRELQAEEEG  VEKSSVKVGGLTQSYSKDGAPEWKWLGNCPKDGKRSPGSS SSPPPLLPRVSSAATNSLDPTWHFDPSPILSSGI+SVQA GSTASSPV TSEFPEPGRIAALASRIETR ASPD+K GGS LTSPV ATVPG +PGK DVGPLATALPLP LAATTAAGPALRSRSNSGR
Sbjct:    1 MGSKAEEPGGGGGSIDIHQAVAHNREDQIKQYVDAGGDLDRRDGNNLAPLHIAAAGGFCNVVEFLLMHKAGVDVTSKIGHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVANEDNVKAGETFLPEVPEAQQGQIKVLLKERQPLLMKGYEAARRNMALMYMRSERSDLNLRMSQGEVETLWGKLAKREKELNMSKMGARDLSHAVKAMKSALEQGRNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAERSYATLLEEGRGRASSCEGDGEEERSSTLQRELQAEEEGERVEKSSVKVGGLTQSYSKDGAPEWKWLGNCPKDGKRSPGSSTSSPPPLLPRVSSAATNSLDPTWHFDPSPILSSGIISVQA-GSTASSPVLTSEFPEPGRIAALASRIETRHASPDEKNGGSTLTSPVQATVPGNVPGKADVGPLATALPLPPLAATTAAGPALRSRSNSGR 558

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BLAST of mRNA_Ecto-sp13_S_contig569.16062.1 vs. uniprot
Match: D8LMP3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMP3_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 2.820e-14
Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 0

Query:  208 NEDNVKAGETFLPEVPEAQQGQIKVLLKERQPLLMKGYEAARRNMALMYMRSERSDLNLRMSQGEVETLWGKLAKREKELNMSKMGARDLSHAVKAMKSALEQGRNDAKAMREKLVALETEL 329
            +E   K G+ F   V  +Q+ +IK L+++R  L+ +G+   R     ++M  ER +++   S  EVE LWG+L +REKELNMSK+GARDL HAVK +K+ALE  R   +    ++ ALE  L
Sbjct:  271 DETGAKPGDVFHDGVGMSQRFEIKKLIRQRYNLMAEGFRNTRAAYVKVWMDLERKNMDQAQSALEVELLWGQLERREKELNMSKVGARDLGHAVKQLKTALETNRTTIREKNSRIKALEERL 392

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig569.16062.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig569.16062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JR84_9PHAE	3.770e-267	80.92	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FY56_ECTSI	6.720e-221	90.88	Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto...	[more]
D8LMP3_ECTSI	2.820e-14	41.80	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 301..356
None	No IPR available	PANTHER	PTHR24193	ANKYRIN REPEAT PROTEIN	coord: 15..109
None	No IPR available	PANTHER	PTHR24193:SF76	GA-BINDING PROTEIN SUBUNIT BETA-1	coord: 77..181 coord: 15..109
None	No IPR available	PANTHER	PTHR24193	ANKYRIN REPEAT PROTEIN	coord: 109..207
None	No IPR available	PANTHER	PTHR24193	ANKYRIN REPEAT PROTEIN	coord: 77..181
None	No IPR available	PANTHER	PTHR24193:SF76	GA-BINDING PROTEIN SUBUNIT BETA-1	coord: 109..207
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 78..107 e-value: 5.7E-5 score: 32.5 coord: 45..74 e-value: 0.057 score: 22.6 coord: 177..206 e-value: 380.0 score: 8.1 coord: 111..140 e-value: 4.4E-4 score: 29.6 coord: 12..41 e-value: 2800.0 score: 1.6 coord: 144..173 e-value: 1.2E-4 score: 31.5
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 111..143 score: 13.491
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 144..176 score: 11.381
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 78..110 score: 14.399
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 177..209 score: 8.763
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 45..77 score: 10.686
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 111..174 e-value: 7.7E-11 score: 42.4 coord: 17..109 e-value: 7.4E-15 score: 55.3
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 12..209 score: 58.387
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 2..118 e-value: 1.2E-30 score: 108.2 coord: 119..224 e-value: 2.3E-25 score: 91.0
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 17..213

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig569	contig	Ecto-sp13_S_contig569:2198..12405 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig569.16062.1	mRNA_Ecto-sp13_S_contig569.16062.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig569 2189..12405 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig569.16062.1 ID=prot_Ecto-sp13_S_contig569.16062.1|Name=mRNA_Ecto-sp13_S_contig569.16062.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=762bp
MGSKAEEPGREEESIDIHQAVAHNREDQIKQYVDAGGDLDRRDGNNLAPL
HIAAAGGFCNVVEFLLKHKAGVDVTSKIGHSPLHLACRFGHLPVVLLLLA
EGAELNARDADGNSPLHKAASNGKAQLCREMVKRGADIDGRNKTEYTPLH
WACFKGHKAAAEQLLKCGANIDATSSRRATSLFMSTYYGHVDVTFLLLAW
GADVTVANEDNVKAGETFLPEVPEAQQGQIKVLLKERQPLLMKGYEAARR
NMALMYMRSERSDLNLRMSQGEVETLWGKLAKREKELNMSKMGARDLSHA
VKAMKSALEQGRNDAKAMREKLVALETELNDAKDEAQEQRERAARAERAY
ATLLEGGRGRASSCEGDDEHARSSTLQRELQAEEEGGGVEKSSVKVGGLT
QSYSKDGAPEWKWLGNCPKDGKRSPGSSISSPPPLLPRVSSAATNSLDPT
WHFDPSPILSSGIVSVQAVGSTASSPVHTSEFPEPGRIAALASRIETRKA
SPDDKRGGSNLTSPVLATVPGIPGKTDVGPLATALPLPTLAATTAAGPAL
RSRSNSGRWVMKRCSSSTSLTPDPTDGGLADGGIGGGSGSCSAAGSSSGG
SRNCGVLRRSSSSAATAPQKEDGGVAPAVPRNAPRPAGPAAAGKDDDALA
SPASWEQGGKRRPALLGKSSGGRSISSSSSFGSDDSGFCSALGSRSPDAG
SVPPKGGRAGGGGGVGDEPLMHSKDQQVPSQIDGGEEGGVGGSRCSEATL
PASPDKGGGCG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf