prot_Ecto-sp13_S_contig5668.16029.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5668.16029.1
Unique Nameprot_Ecto-sp13_S_contig5668.16029.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length229
Homology
BLAST of mRNA_Ecto-sp13_S_contig5668.16029.1 vs. uniprot
Match: A0A6H5K0L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L2_9PHAE)

HSP 1 Score: 426 bits (1096), Expect = 6.860e-150
Identity = 220/228 (96.49%), Postives = 221/228 (96.93%), Query Frame = 0
Query:    1 MSMSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCTDEANPGMNMVVVEGGPKAVRAYTKLMTRRIRWGEEEFGEGDXXXXXXEEVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVVASAKAAKASAANAGAIGAGLGY 228
            MSMSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCTDEANPGMNMVVVEGGPKAVRAYTKLMTRRIRWGEEEFGEGD      EEVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVVASAKAA+ASAANAGAIGAGL Y
Sbjct:   41 MSMSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCTDEANPGMNMVVVEGGPKAVRAYTKLMTRRIRWGEEEFGEGDSDSESDEEVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVVASAKAARASAANAGAIGAGLRY 268          
BLAST of mRNA_Ecto-sp13_S_contig5668.16029.1 vs. uniprot
Match: D8LLJ5_ECTSI (Putative 34kDa cdc2-related protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ5_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 5.270e-74
Identity = 116/124 (93.55%), Postives = 118/124 (95.16%), Query Frame = 0
Query:  105 ANPGMNMVVVEGGPKAVRAYTKLMTRRIRWGEEEFGEGDXXXXXXEEVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVVASAKAAKASAANAGAIGAGLGY 228
            ANPGMNMVVVEGGPKAVRAYTKLMTRRIRWGEEEFGEGD      EEVSKPALSGCMCE+VWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVVASAKAA+ASAANAGAIGAGLGY
Sbjct:  180 ANPGMNMVVVEGGPKAVRAYTKLMTRRIRWGEEEFGEGDSDSNSDEEVSKPALSGCMCEVVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVVASAKAARASAANAGAIGAGLGY 303          
BLAST of mRNA_Ecto-sp13_S_contig5668.16029.1 vs. uniprot
Match: A0A7S2RZ89_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ89_9STRA)

HSP 1 Score: 218 bits (554), Expect = 2.700e-64
Identity = 120/212 (56.60%), Postives = 154/212 (72.64%), Query Frame = 0
Query:    1 MSMSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCTDEA---NPGMNMVVVEGGPKAVRAYTKLMTRRIRW---GEEEFGEGDXXXXXXEEVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVV 206
            + ++NFM+VLGDQAV DPSK+E  VM QV +R   HE RN A KLTPQE++DK++RKL EDTS+++ VAVYRV D+S+ + +FKVD+NAQQ  LTGGV+ C  +     P +++VVVEGGPKA++ Y++LM RRI+W   GE+      XXXXX  E  +   +   C+LVW GTV  RSF AFRFQECKS   ARKVM+ KGVAH WDMV+
Sbjct:  332 LKLANFMKVLGDQAVADPSKIEKKVMEQVQQRVMNHEMRNMAQKLTPQERKDKKRRKLTEDTSRQVVVAVYRVKDLSNQQHQFKVDMNAQQNSLTGGVLTCKGDVIQGEPNLSLVVVEGGPKAIKRYSRLMLRRIQWTEEGEDXXXXXXXXXXXAGEAGRTRNN--RCDLVWTGTVVRRSFNAFRFQECKSGAAARKVMESKGVAHYWDMVL 541          
BLAST of mRNA_Ecto-sp13_S_contig5668.16029.1 vs. uniprot
Match: A0A7S2G0F4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0F4_9STRA)

HSP 1 Score: 217 bits (552), Expect = 3.880e-63
Identity = 121/207 (58.45%), Postives = 154/207 (74.40%), Query Frame = 0
Query:    1 MSMSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCTDEANP-GMNMVVVEGGPKAVRAYTKLMTRRIRWGEEEFGEGDXXXXXXEEVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVV 206
            + ++NFM+VLGDQAV DPSK+E  VM QV  R   HE RNQA KLTP E+++K+++KL EDTS ++ VA++RV DMSD + +FKVD+NAQQ  LTGGV+ C  +A    +++VV+EGGPKAV+ YT+LM  RI+W  +EF E DXXXXXX   SK   +   C+LVW GT   R+F AFRFQ+CKS   ARKVM+ KGVAHLWDMVV
Sbjct:  440 LKLANFMKVLGDQAVADPSKIERKVMEQVQARVMNHEMRNQARKLTPAERKEKKRKKLAEDTSLQVTVALFRVLDMSDKQLQFKVDMNAQQNNLTGGVLQCKGDAGDVNISLVVIEGGPKAVKRYTRLMLHRIKWSGDEFDE-DXXXXXXAMTSKRKQN--RCDLVWIGTAVRRNFNAFRFQDCKSAAAARKVMESKGVAHLWDMVV 643          
BLAST of mRNA_Ecto-sp13_S_contig5668.16029.1 vs. uniprot
Match: A0A7S2C0F0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0F0_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.730e-62
Identity = 107/196 (54.59%), Postives = 132/196 (67.35%), Query Frame = 0
Query:   14 AVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCTDEANPG---MNMVVVEGGPKAVRAYTKLMTRRIRWGEEEFGEGDXXXXXXEEVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVV 206
            ++ DPSK+EA VM QV  R   HE RN A KLTP E+++K+++KL EDTS ++ V +YRV D+SD + +FKVD+NAQQ  LTGGV+ C  E   G   +++VVVEGGPKA++ YT+LM RRI+W  +EF E              A S   CELVW GTV  RSF AFRFQEC S   AR VMD KGVAH WDMVV
Sbjct:    8 SISDPSKIEAKVMEQVQARVMNHEMRNAARKLTPAERKEKKRKKLAEDTSLQVVVGLYRVQDLSDTQHQFKVDMNAQQNNLTGGVLTCKGEGGSGDKPVSLVVVEGGPKAIKRYTRLMLRRIKWAGDEFDEDSDESDDEGMSGSKANSDNKCELVWTGTVVRRSFNAFRFQECNSSAKARTVMDSKGVAHYWDMVV 203          
BLAST of mRNA_Ecto-sp13_S_contig5668.16029.1 vs. uniprot
Match: A0A5D6XZ83_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZ83_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.610e-58
Identity = 111/207 (53.62%), Postives = 145/207 (70.05%), Query Frame = 0
Query:    3 MSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCTDEANPGMNMVVVEGGPKAVRAYTKLMTRRIRW-GEEEFGEGDXXXXXXEEVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVVAS 208
            +SN M+VL DQAV DPS +E  V  QV +R+  HE RN A KLTP+E+R+K+ RK+ ED + ++ VAV+RV D+S+P+ RFKVDVNAQQ +LTGGV++C +E     NMVVVEGG KA++ YT+L+T+RI W G+ +   G     X +E SK       C LVWQG V  ++F  FRFQEC+S ETARKVM+ KGV   WD+VV S
Sbjct:  413 LSNMMRVLADQAVADPSAIERKVREQVAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFRVPDLSNPQHRFKVDVNAQQYHLTGGVLICKEE---NANMVVVEGGKKAIKHYTRLLTKRIDWLGDADDSYGGDSDDXDDE-SKQRRRSNSCSLVWQGIVARKAFTNFRFQECRSVETARKVMEAKGVVQYWDLVVQS 615          
BLAST of mRNA_Ecto-sp13_S_contig5668.16029.1 vs. uniprot
Match: A0A0P1AQ02_PLAHL (U4 u6 small nuclear ribonucleoprotein prp3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQ02_PLAHL)

HSP 1 Score: 199 bits (507), Expect = 7.470e-57
Identity = 112/212 (52.83%), Postives = 148/212 (69.81%), Query Frame = 0
Query:    3 MSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCTDEANPGMNMVVVEGGPKAVRAYTKLMTRRIRWG---EEEFGEGDXXXXXXEEVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVVASAKA 211
            +SN M+VL +QAV DPS +E  V  Q+ +R+  HE RN A KLTP+E+R+K+ RK+ +D + ++ VAV++V D+S+P+ RFKVDVNAQQ +LTGGV++C D     +NMVV EGG KA++ YTKLM RRI W    E E G G       E V+K A +GC+  LVWQG V  +SF  FRFQEC++  TARKVM+ K VAH WD+V  SA+A
Sbjct:  414 LSNMMRVLSEQAVADPSAIERKVREQIAQREKNHEMRNIARKLTPEERREKKLRKIKKDAAGDIHVAVFKVPDLSNPQHRFKVDVNAQQFHLTGGVLICKDS---NINMVVAEGGKKAIKQYTKLMMRRIDWNGAREAEQGSGSED----ENVAK-ANNGCL--LVWQGMVARKSFNNFRFQECRTSATARKVMEAKNVAHYWDLVENSAEA 615          
BLAST of mRNA_Ecto-sp13_S_contig5668.16029.1 vs. uniprot
Match: A0A8K1CCE6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCE6_PYTOL)

HSP 1 Score: 199 bits (506), Expect = 8.720e-57
Identity = 106/203 (52.22%), Postives = 149/203 (73.40%), Query Frame = 0
Query:    3 MSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCTDEANPGMNMVVVEGGPKAVRAYTKLMTRRIRWGEEEFGEGDXXXXXXEEVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMV 205
            +SN M+VLG+QAV DPS +E  V  Q+ +R+  HE RN A KLTP+E+R+K+ RK+ ED + ++ VAV+RV D+++P+ RFKVDVNAQQ +LTGGV++C ++    +N+++VEGG KA++ YT+L+T+RIRW +   G+  XXXXXX   +    SGC+  LVWQG V  R+F  FRFQEC++  TARKVM+ K V H WD+V
Sbjct:  407 LSNMMKVLGEQAVADPSAIERKVRQQMAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFRVPDLANPQHRFKVDVNAQQYHLTGGVLICKED---NINVIIVEGGRKAIKHYTRLLTKRIRWNDNGTGDDAXXXXXXXXXNAENTSGCV--LVWQGIVARRAFNNFRFQECRTATTARKVMETKNVVHYWDLV 604          
BLAST of mRNA_Ecto-sp13_S_contig5668.16029.1 vs. uniprot
Match: A0A6A3TVC5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TVC5_9STRA)

HSP 1 Score: 199 bits (506), Expect = 1.150e-56
Identity = 108/213 (50.70%), Postives = 144/213 (67.61%), Query Frame = 0
Query:    3 MSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCTDEANPGMNMVVVEGGPKAVRAYTKLMTRRIRWGEEEFGEGDXXXXXXEEVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVVASAKAAKAS 215
            +SN M+VL +QAV DPS +E  V  Q+ +R+  HE RN A KLTP+E+R+K+ RK+ ED + ++ VAV++V D+S+P+ RFKVDVNAQQ +LTGGV++C D     +NMVVVEGG KA++ YTKLM RRI W     G  +       E    A  G  C LVWQG V  ++F  FRFQEC++  TARKVM+ K V H WD+V  SA+A+ A+
Sbjct:  420 LSNMMRVLSEQAVADPSAIERKVREQIAQRENNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFKVPDLSNPQHRFKVDVNAQQYHLTGGVLICKDG---NINMVVVEGGKKAIKQYTKLMMRRIDWQ----GSHEAEQESDSEDEDAAKRGNGCLLVWQGVVARKAFNNFRFQECRTAVTARKVMEAKSVVHYWDLVEKSAEASAAA 625          
BLAST of mRNA_Ecto-sp13_S_contig5668.16029.1 vs. uniprot
Match: H3GNM0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNM0_PHYRM)

HSP 1 Score: 198 bits (504), Expect = 1.820e-56
Identity = 107/213 (50.23%), Postives = 144/213 (67.61%), Query Frame = 0
Query:    3 MSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEKRDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVMCTDEANPGMNMVVVEGGPKAVRAYTKLMTRRIRWGEEEFGEGDXXXXXXEEVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAHLWDMVVASAKAAKAS 215
            +SN M+VL +QAV DPS +E  V  Q+ +R+  HE RN A KLTP+E+R+K+ RK+ ED + ++ VA+++V D+S+P+ RFKVDVNAQQ +LTGGV++C D     +N VVVEGG KA++ YTKLM RRI W     G  +       E    A  G  C LVWQG V  ++F +FRFQEC++  TARKVM+ K V H WD+V  SA+AA A+
Sbjct:  407 LSNMMRVLSEQAVADPSAIERKVREQIAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVALFKVPDLSNPQHRFKVDVNAQQYHLTGGVLICKDS---DINTVVVEGGKKAIKQYTKLMMRRIDWQ----GAREAEQESDSEDEDAAKRGNGCLLVWQGVVARKAFNSFRFQECRTTVTARKVMEAKNVVHYWDLVEKSAEAAAAA 612          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5668.16029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0L2_9PHAE6.860e-15096.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLJ5_ECTSI5.270e-7493.55Putative 34kDa cdc2-related protein kinase n=1 Tax... [more]
A0A7S2RZ89_9STRA2.700e-6456.60Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G0F4_9STRA3.880e-6358.45Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2C0F0_9STRA1.730e-6254.59Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A5D6XZ83_9STRA1.610e-5853.62Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1AQ02_PLAHL7.470e-5752.83U4 u6 small nuclear ribonucleoprotein prp3 n=1 Tax... [more]
A0A8K1CCE6_PYTOL8.720e-5752.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3TVC5_9STRA1.150e-5650.70Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
H3GNM0_PHYRM1.820e-5650.23Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013881Pre-mRNA-splicing factor 3PFAMPF08572PRP3coord: 2..46
e-value: 3.5E-13
score: 49.8
IPR010541Domain of unknown function DUF1115PFAMPF06544DUF1115coord: 69..205
e-value: 1.2E-40
score: 139.0
IPR027104U4/U6 small nuclear ribonucleoprotein Prp3PANTHERPTHR14212U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATEDcoord: 1..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5668contigEcto-sp13_S_contig5668:2484..8035 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5668.16029.1mRNA_Ecto-sp13_S_contig5668.16029.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5668 1231..8089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5668.16029.1 ID=prot_Ecto-sp13_S_contig5668.16029.1|Name=mRNA_Ecto-sp13_S_contig5668.16029.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=229bp
MSMSNFMQVLGDQAVVDPSKVEALVMGQVHRRKAEHEARNQAAKLTPQEK
RDKRKRKLLEDTSKELQVAVYRVADMSDPKRRFKVDVNAQQRYLTGGVVM
CTDEANPGMNMVVVEGGPKAVRAYTKLMTRRIRWGEEEFGEGDSDSDSDE
EVSKPALSGCMCELVWQGTVQTRSFPAFRFQECKSPETARKVMDEKGVAH
LWDMVVASAKAAKASAANAGAIGAGLGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013881Pre-mRNA_splic_Prp3
IPR010541DUF1115
IPR027104Prp3