prot_Ecto-sp13_S_contig5660.16021.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5660.16021.1
Unique Nameprot_Ecto-sp13_S_contig5660.16021.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
BLAST of mRNA_Ecto-sp13_S_contig5660.16021.1 vs. uniprot
Match: A0A6H5LNR6_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNR6_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 3.090e-52
Identity = 118/130 (90.77%), Postives = 121/130 (93.08%), Query Frame = 0
Query:    2 VTLPSQAAAXXXXXXXXXXXLSVGAAGRERDGSXXXXXXXXGERGDGGLLAKKVARQIAERKKQDEVPFQTKAMREIERLQKSTVYRTTVIKVQFPDRVVLQASFASTEGVKDLLDVVKSSLEDDVAARP 131
            VTLPSQ   XXXXXXXXXXX SVGAAGRERDGS    XXX GERGDGGLLAKKVARQIAERKKQDEVPFQTKAMR+IERLQKSTVYRTTVIKVQFPDRVVLQ++FASTEGVKDLLDVVKSSLEDDVAARP
Sbjct:  209 VTLPSQX--XXXXXXXXXXXFSVGAAGRERDGSSGMGXXXDGERGDGGLLAKKVARQIAERKKQDEVPFQTKAMRDIERLQKSTVYRTTVIKVQFPDRVVLQSTFASTEGVKDLLDVVKSSLEDDVAARP 336          
BLAST of mRNA_Ecto-sp13_S_contig5660.16021.1 vs. uniprot
Match: D7FME0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME0_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 3.180e-49
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0
Query:   43 GERGDGGLLAKKVARQIAERKKQDEVPFQTKAMREIERLQKSTVYRTTVIKVQFPDRVVLQASFASTEGVKDLLDVVKSSLEDDVAARP 131
            GERGDGGLLAKKVARQIAERKKQDEVPFQTKAMREIERLQKSTVYRTTVIKVQFPDRVVLQA+FASTEGVKDLLDVVKSSLEDDVAARP
Sbjct:    7 GERGDGGLLAKKVARQIAERKKQDEVPFQTKAMREIERLQKSTVYRTTVIKVQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARP 95          
BLAST of mRNA_Ecto-sp13_S_contig5660.16021.1 vs. uniprot
Match: A0A7S2V2I9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2I9_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.930e-14
Identity = 40/85 (47.06%), Postives = 62/85 (72.94%), Query Frame = 0
Query:   47 DGGLLAKKVARQIAERKKQDEVPFQTKAMREIERLQKSTVYRTTVIKVQFPDRVVLQASFASTEGVKDLLDVVKSSLEDDVAARP 131
            D  L+A+ + +++ E+KK++  PF+T+AMRE+E L+K+ V+  TVI+VQFPDRVV+QA F   E V  ++D+V+ +L  D A RP
Sbjct:  238 DSTLIARSMHKKMEEQKKREAAPFRTRAMRELEALEKAKVFAFTVIRVQFPDRVVIQAHFHPRESVGTVIDLVRQNLSPDHANRP 322          
BLAST of mRNA_Ecto-sp13_S_contig5660.16021.1 vs. uniprot
Match: A0A835YJ49_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ49_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 8.720e-14
Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 0
Query:   50 LLAKKVARQIAERKKQDEVPFQTKAMREIERLQKSTVYRTTVIKVQFPDRVVLQASFASTEGVKDLLDVVKSSLEDDVA 128
            LLA++VARQ+AERK+++  PFQT+AMRE+ERLQK+  Y   +I+VQ PDR V+QA F   E V D+   V ++L   V+
Sbjct:  552 LLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAAAVSAALRAGVS 630          
BLAST of mRNA_Ecto-sp13_S_contig5660.16021.1 vs. uniprot
Match: A0A7S2RJ30_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJ30_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.400e-12
Identity = 37/78 (47.44%), Postives = 57/78 (73.08%), Query Frame = 0
Query:   46 GDGGLLAKKVARQIAERKKQDEVPFQTKAMREIERLQKSTVYRTTVIKVQFPDRVVLQASFASTEGVKDLLDVVKSSL 123
            GD GL+AK +A ++A+ K+ ++VPFQTKAMRE+ +L+K+ VY  T+++VQFPDR V+ A+F   E ++ +  VV   L
Sbjct:  113 GDAGLVAKAMAAKMAQAKRAEDVPFQTKAMRELAQLEKARVYERTIVRVQFPDRTVVTANFHPHETIQAVAAVVSDLL 190          
BLAST of mRNA_Ecto-sp13_S_contig5660.16021.1 vs. uniprot
Match: A0A7S2RKB7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKB7_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.610e-12
Identity = 37/78 (47.44%), Postives = 57/78 (73.08%), Query Frame = 0
Query:   46 GDGGLLAKKVARQIAERKKQDEVPFQTKAMREIERLQKSTVYRTTVIKVQFPDRVVLQASFASTEGVKDLLDVVKSSL 123
            GD GL+AK +A ++A+ K+ ++VPFQTKAMRE+ +L+K+ VY  T+++VQFPDR V+ A+F   E ++ +  VV   L
Sbjct:  509 GDAGLVAKAMAAKMAQAKRAEDVPFQTKAMRELAQLEKARVYERTIVRVQFPDRTVVTANFHPHETIQAVAAVVSDLL 586          
BLAST of mRNA_Ecto-sp13_S_contig5660.16021.1 vs. uniprot
Match: A0A7S3XNW3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNW3_HETAK)

HSP 1 Score: 68.9 bits (167), Expect = 4.490e-12
Identity = 39/82 (47.56%), Postives = 59/82 (71.95%), Query Frame = 0
Query:   47 DGGLLAKKVARQIAERKKQDEVPFQTKAMREIERLQKSTVYRTTVIKVQFPDRVVLQASFASTEGVKDLLDVVKSSLEDDVA 128
            D  LL ++VA+Q+AE KKQ+   F+T+AMRE++RL+K+  +  T+++VQFPDRVVLQA F   E V  + D+V + L ++ A
Sbjct:   19 DARLLQQRVAQQVAEAKKQE--VFRTRAMRELDRLEKARAFTHTLVRVQFPDRVVLQARFHPRETVGAVADLVAAHLREEYA 98          
BLAST of mRNA_Ecto-sp13_S_contig5660.16021.1 vs. uniprot
Match: K3WKD5_GLOUD (UBX domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKD5_GLOUD)

HSP 1 Score: 64.7 bits (156), Expect = 1.700e-9
Identity = 31/55 (56.36%), Postives = 46/55 (83.64%), Query Frame = 0
Query:   70 FQTKAMREIERLQKSTVYRTTVIKVQFPDRVVLQASFASTEGVKDLLDVVKSSLE 124
            F+T+AMRE++ L+K  V++TT+I+VQFPDRVVLQA+F   E V+D++D V+ SL+
Sbjct:  449 FRTQAMRELDELKKKKVFQTTLIRVQFPDRVVLQAAFHPNETVQDVVDHVRESLQ 503          
BLAST of mRNA_Ecto-sp13_S_contig5660.16021.1 vs. uniprot
Match: A0A3M6VAR4_9STRA (UBX domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAR4_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.040e-8
Identity = 36/87 (41.38%), Postives = 57/87 (65.52%), Query Frame = 0
Query:   44 ERGDGGLLAKKV-ARQIAERKKQDEVPFQTKAMREIERLQKSTVYRTTVIKVQFPDRVVLQASFASTEGVKDLLDVVKSSLEDDVAA 129
            ER D  +L   + ARQ+   K ++   F+T+AMRE++ L++  V++T +I+VQFPDR V+QASF   E ++D++D V   L+D   A
Sbjct:  416 ERSDAQILISSLKARQVEMEKTKN---FRTRAMRELDELKRKRVFQTVLIRVQFPDRAVMQASFHPNETIQDVMDHVTKCLDDQYKA 499          
BLAST of mRNA_Ecto-sp13_S_contig5660.16021.1 vs. uniprot
Match: A0A485KPD5_9STRA (Aste57867_10017 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPD5_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 9.570e-8
Identity = 31/72 (43.06%), Postives = 50/72 (69.44%), Query Frame = 0
Query:   62 RKKQDEVP----FQTKAMREIERLQKSTVYRTTVIKVQFPDRVVLQASFASTEGVKDLLDVVKSSLEDDVAA 129
            R +QDE      F+T AMRE++ +QK  V+++TV++++FPD+VVLQA+F   E +  ++ ++  SL DDV A
Sbjct:  437 RARQDEAEKNQSFRTSAMRELDEMQKKAVFQSTVLRIRFPDQVVLQATFHPNETIAAVVKLLHESLNDDVPA 508          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5660.16021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LNR6_9PHAE3.090e-5290.77UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FME0_ECTSI3.180e-4998.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V2I9_9STRA3.930e-1447.06Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YJ49_9STRA8.720e-1451.90UBX domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2RJ30_9STRA1.400e-1247.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2RKB7_9STRA2.610e-1247.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3XNW3_HETAK4.490e-1247.56Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
K3WKD5_GLOUD1.700e-956.36UBX domain-containing protein n=1 Tax=Globisporang... [more]
A0A3M6VAR4_9STRA2.040e-841.38UBX domain-containing protein n=1 Tax=Peronospora ... [more]
A0A485KPD5_9STRA9.570e-843.06Aste57867_10017 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46467FAMILY NOT NAMEDcoord: 55..126
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 64..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5660contigEcto-sp13_S_contig5660:7847..8663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5660.16021.1mRNA_Ecto-sp13_S_contig5660.16021.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5660 7847..8663 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5660.16021.1 ID=prot_Ecto-sp13_S_contig5660.16021.1|Name=mRNA_Ecto-sp13_S_contig5660.16021.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
QVTLPSQAAAAAAAATAAAGGLSVGAAGRERDGSSGMGGGGDGERGDGGL
LAKKVARQIAERKKQDEVPFQTKAMREIERLQKSTVYRTTVIKVQFPDRV
VLQASFASTEGVKDLLDVVKSSLEDDVAARPVSE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf