prot_Ecto-sp13_S_contig5657.16014.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5657.16014.1
Unique Nameprot_Ecto-sp13_S_contig5657.16014.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length54
Homology
BLAST of mRNA_Ecto-sp13_S_contig5657.16014.1 vs. uniprot
Match: D7FQ68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ68_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 3.630e-22
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 MKKFEPKHRLARAGLQDKKETSRKQIKESKNRQKKIRGTGRRIAKHKAKKAAK 53
            MKKFEPKHRLARAGLQDKKETSRKQIKE+KNRQKKIRGTGRRIAKHKAKKAAK
Sbjct:   83 MKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK 135          
BLAST of mRNA_Ecto-sp13_S_contig5657.16014.1 vs. uniprot
Match: W7U6J8_9STRA (40S ribosomal protein S24 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6J8_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.140e-16
Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    2 KKFEPKHRLARAGLQDKKETSRKQIKESKNRQKKIRGTGRRIAKHKAKKAAK 53
            KKFEPKHRL RAGL  KKETSRKQIKE+KNR KKIRGTGRR+AKHKAKKA K
Sbjct:   86 KKFEPKHRLVRAGLVVKKETSRKQIKEAKNRAKKIRGTGRRLAKHKAKKANK 137          
BLAST of mRNA_Ecto-sp13_S_contig5657.16014.1 vs. uniprot
Match: F0YI50_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI50_AURAN)

HSP 1 Score: 72.4 bits (176), Expect = 6.990e-15
Identity = 41/52 (78.85%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    2 KKFEPKHRLARAGLQDKKETSRKQIKESKNRQKKIRGTGRRIAKHKAKKAAK 53
            KK+EPK+RL R G+ +KKETSRKQIKE+KNR+KK+RGTGRRIA HKAKKAAK
Sbjct:   84 KKYEPKYRLIRNGIVEKKETSRKQIKEAKNRKKKVRGTGRRIANHKAKKAAK 135          
BLAST of mRNA_Ecto-sp13_S_contig5657.16014.1 vs. uniprot
Match: A0A7S4HQJ4_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4HQJ4_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 3.970e-14
Identity = 38/52 (73.08%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 MKKFEPKHRLARAGLQDKKETSRKQIKESKNRQKKIRGTGRRIAKHKAKKAA 52
            ++KFEPKHRL R G+Q+KKETSRK +KE+KN+ KK+RGTGR IAKHKAK+AA
Sbjct:   83 LRKFEPKHRLVRQGIQEKKETSRKAMKEAKNKGKKVRGTGRSIAKHKAKRAA 134          
BLAST of mRNA_Ecto-sp13_S_contig5657.16014.1 vs. uniprot
Match: A0A7S2US90_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US90_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 7.770e-14
Identity = 42/52 (80.77%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    2 KKFEPKHRLARAGLQDKKETSRKQIKESKNRQKKIRGTGRRIAKHKAKKAAK 53
            KKFEPK RL R GL +K ETSRKQIKE+KNR KKIRGTGRRIA+HKAKKA K
Sbjct:   85 KKFEPKFRLVRLGLAEKTETSRKQIKEAKNRGKKIRGTGRRIARHKAKKANK 136          
BLAST of mRNA_Ecto-sp13_S_contig5657.16014.1 vs. uniprot
Match: A0A7S2FWG9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWG9_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.300e-13
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    2 KKFEPKHRLARAGLQDKKETSRKQIKESKNRQKKIRGTGRRIAKHKAKKAAK 53
            KKFEPK R  R GL +K ETSRKQIKE+KN++KKIRGTGRRIA HKAKKAAK
Sbjct:   86 KKFEPKFRCIRNGLMEKTETSRKQIKEAKNKRKKIRGTGRRIAAHKAKKAAK 137          
BLAST of mRNA_Ecto-sp13_S_contig5657.16014.1 vs. uniprot
Match: B7G2B5_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2B5_PHATC)

HSP 1 Score: 66.6 bits (161), Expect = 1.270e-12
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    1 MKKFEPKHRLARAGLQDKKETSRKQIKESKNRQKKIRGTGRRIAKHKAKKAA 52
            M+KFEPKHRL R GL +KKE SRK IKE+KN+ KKIRGTG  IAKHKAK+AA
Sbjct:   83 MRKFEPKHRLIRQGLVEKKEQSRKAIKEAKNKAKKIRGTGASIAKHKAKRAA 134          
BLAST of mRNA_Ecto-sp13_S_contig5657.16014.1 vs. uniprot
Match: A0A8J2WEF7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WEF7_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.580e-12
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    2 KKFEPKHRLARAGLQDKKETSRKQIKESKNRQKK----IRGTGRRIAKHKAKKAAK 53
            KK+EPK+RL R G  +KKETSRKQIKE+KNR+KK    IRGTGRRIA HKAKKAAK
Sbjct:   90 KKYEPKYRLVRNGFVEKKETSRKQIKEAKNRKKKQIRQIRGTGRRIANHKAKKAAK 145          
BLAST of mRNA_Ecto-sp13_S_contig5657.16014.1 vs. uniprot
Match: W4GRV1_9STRA (40S ribosomal protein S24 n=6 Tax=Saprolegniaceae TaxID=4764 RepID=W4GRV1_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.550e-12
Identity = 39/52 (75.00%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    2 KKFEPKHRLARAGLQDKKETSRKQIKESKNRQKKIRGTGRRIAKHKAKKAAK 53
            KKFEPK+RL R GL +K E SRKQIKESKNR KK+RG GRRIA+HKA KA K
Sbjct:   86 KKFEPKYRLVRQGLSEKVEKSRKQIKESKNRAKKVRGVGRRIARHKANKANK 137          
BLAST of mRNA_Ecto-sp13_S_contig5657.16014.1 vs. uniprot
Match: A0A7S3GRG0_9STRA (40S ribosomal protein S24 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S3GRG0_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.600e-12
Identity = 39/51 (76.47%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    2 KKFEPKHRLARAGLQDKKETSRKQIKESKNRQKKIRGTGRRIAKHKAKKAA 52
            KKFEPKHRLAR GL+ K+E SRKQIKE KNR KK+ G GRRIA+HKAKK A
Sbjct:   87 KKFEPKHRLARNGLEKKREGSRKQIKEKKNRGKKVWGVGRRIARHKAKKNA 137          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5657.16014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ68_ECTSI3.630e-2298.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7U6J8_9STRA3.140e-1686.5440S ribosomal protein S24 n=2 Tax=Monodopsidaceae ... [more]
F0YI50_AURAN6.990e-1578.85Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S4HQJ4_9STRA3.970e-1473.08Hypothetical protein n=2 Tax=Odontellaceae TaxID=2... [more]
A0A7S2US90_9STRA7.770e-1480.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2FWG9_9STRA2.300e-1378.85Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B7G2B5_PHATC1.270e-1275.00Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A8J2WEF7_9STRA1.580e-1275.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W4GRV1_9STRA2.550e-1275.0040S ribosomal protein S24 n=6 Tax=Saprolegniaceae ... [more]
A0A7S3GRG0_9STRA2.600e-1276.4740S ribosomal protein S24 n=2 Tax=Eukaryota TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 12..32
NoneNo IPR availableGENE3D3.30.70.3370coord: 1..53
e-value: 9.8E-13
score: 49.8
IPR001976Ribosomal protein S24ePANTHERPTHR1049640S RIBOSOMAL PROTEIN S24coord: 1..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5657contigEcto-sp13_S_contig5657:847..1522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5657.16014.1mRNA_Ecto-sp13_S_contig5657.16014.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5657 742..1633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5657.16014.1 ID=prot_Ecto-sp13_S_contig5657.16014.1|Name=mRNA_Ecto-sp13_S_contig5657.16014.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=54bp
MKKFEPKHRLARAGLQDKKETSRKQIKESKNRQKKIRGTGRRIAKHKAKK
AAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001976Ribosomal_S24e