mRNA_Ecto-sp13_S_contig56552.16008.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig56552.16008.1 vs. uniprot
Match: A0A6H5LCY9_9PHAE (Pept_C1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LCY9_9PHAE) HSP 1 Score: 133 bits (334), Expect = 5.160e-35 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 1
Query: 13 AGSFMGGHAVKMIGWGTDEASGEDYWLIANSWNPSWGEGGLFRILRGVNECGIEGQIVAGEV 198
+GSFMGGHAVKMIGWGTDE SGEDYWLIANSWNPSWGEGGLFRILRGVNECGIEGQIVAGEV
Sbjct: 501 SGSFMGGHAVKMIGWGTDEVSGEDYWLIANSWNPSWGEGGLFRILRGVNECGIEGQIVAGEV 562
BLAST of mRNA_Ecto-sp13_S_contig56552.16008.1 vs. uniprot
Match: A0A835ZA77_9STRA (Cathepsin B-like proteinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA77_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.310e-24 Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = 1
Query: 19 SFMGGHAVKMIGWGTDEASGEDYWLIANSWNPSWGEGGLFRILRGVNECGIEGQIVAGE 195
SFMGGHAVK+IGWGTD+ +G DYW + NSWN SWGE G FRILRG N CGIEG+IVAGE
Sbjct: 470 SFMGGHAVKIIGWGTDKETGVDYWTVLNSWNESWGEQGTFRILRGSNHCGIEGEIVAGE 528
BLAST of mRNA_Ecto-sp13_S_contig56552.16008.1 vs. uniprot
Match: A0A0C2CZX5_9BILA (Pept_C1 domain-containing protein n=2 Tax=Strongylida TaxID=6308 RepID=A0A0C2CZX5_9BILA) HSP 1 Score: 94.7 bits (234), Expect = 2.930e-24 Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 13 AGSFMGGHAVKMIGWGTDEASGEDYWLIANSWNPSWGEGGLFRILRGVNECGIEGQIVAGE 195
AG +GGHAVKMIGWGT+ +G YW+ ANSWN WGE G FRI+RG+NECGIE +VAGE
Sbjct: 6 AGQMLGGHAVKMIGWGTE--NGTPYWICANSWNSDWGENGFFRIIRGLNECGIESGVVAGE 64
BLAST of mRNA_Ecto-sp13_S_contig56552.16008.1 vs. uniprot
Match: A0A7S1TV86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV86_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 8.450e-24 Identity = 39/58 (67.24%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 16 GSFMGGHAVKMIGWGTDEASGEDYWLIANSWNPSWGEGGLFRILRGVNECGIEGQIVA 189
G+ GGHAVK +GWG D+A+G YW +ANSWNP WGE G FRILRGVNECGIE ++ A
Sbjct: 49 GNNAGGHAVKFVGWGVDQATGTKYWKVANSWNPYWGEDGYFRILRGVNECGIENEVTA 106
BLAST of mRNA_Ecto-sp13_S_contig56552.16008.1 vs. uniprot
Match: A0A7S1AUC0_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AUC0_NOCSC) HSP 1 Score: 94.7 bits (234), Expect = 1.450e-23 Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 13 AGSFMGGHAVKMIGWGTDEASGEDYWLIANSWNPSWGEGGLFRILRGVNECGIEGQIVAGEV 198
+GS +GGHA+K+ GWGT+++ EDYWL+ANSWN WG+ G F+I RGVNECGIEGQ+ AG V
Sbjct: 60 SGSQLGGHAIKIFGWGTEDS--EDYWLVANSWNDQWGDHGTFKIRRGVNECGIEGQVSAGTV 119
BLAST of mRNA_Ecto-sp13_S_contig56552.16008.1 vs. uniprot
Match: A0A2T7PGR8_POMCA (Pept_C1 domain-containing protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PGR8_POMCA) HSP 1 Score: 98.6 bits (244), Expect = 3.590e-23 Identity = 43/61 (70.49%), Postives = 52/61 (85.25%), Query Frame = 1
Query: 13 AGSFMGGHAVKMIGWGTDEASGEDYWLIANSWNPSWGEGGLFRILRGVNECGIEGQIVAGE 195
+GS +GGHAVK++G+G + SGE YWL+ANSWNP WG+ G F+ILRGVNECGIE QIVAGE
Sbjct: 271 SGSVLGGHAVKILGYGVE--SGEKYWLVANSWNPDWGDAGFFKILRGVNECGIESQIVAGE 329
BLAST of mRNA_Ecto-sp13_S_contig56552.16008.1 vs. uniprot
Match: A6N1G1_ORYSI (Cathepsin b-like cysteine proteinase 3 (Fragment) n=1 Tax=Oryza sativa subsp. indica TaxID=39946 RepID=A6N1G1_ORYSI) HSP 1 Score: 94.0 bits (232), Expect = 4.620e-23 Identity = 40/59 (67.80%), Postives = 47/59 (79.66%), Query Frame = 1
Query: 16 GSFMGGHAVKMIGWGTDEASGEDYWLIANSWNPSWGEGGLFRILRGVNECGIEGQIVAG 192
G MGGHAVK+IGWGT +A GEDYWL+AN WN WG+ G F+I+RG NECGIE +VAG
Sbjct: 63 GGMMGGHAVKLIGWGTTDA-GEDYWLLANQWNRGWGDDGYFKIIRGTNECGIEEDVVAG 120
BLAST of mRNA_Ecto-sp13_S_contig56552.16008.1 vs. uniprot
Match: A0A5J4N2D7_9TREM (Cathepsin B (Fragment) n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4N2D7_9TREM) HSP 1 Score: 92.4 bits (228), Expect = 5.180e-23 Identity = 40/60 (66.67%), Postives = 47/60 (78.33%), Query Frame = 1
Query: 13 AGSFMGGHAVKMIGWGTDEASGEDYWLIANSWNPSWGEGGLFRILRGVNECGIEGQIVAG 192
AG +MGGHAVK++GWG +G YWL+ANSWN WGE G FRILRGV+ECGIE +VAG
Sbjct: 32 AGEYMGGHAVKLLGWGV--TNGTKYWLLANSWNEDWGEKGFFRILRGVDECGIESDVVAG 89
BLAST of mRNA_Ecto-sp13_S_contig56552.16008.1 vs. uniprot
Match: A0A3P7N885_CYLGO (Pept_C1 domain-containing protein n=1 Tax=Cylicostephanus goldi TaxID=71465 RepID=A0A3P7N885_CYLGO) HSP 1 Score: 95.1 bits (235), Expect = 6.570e-23 Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 1
Query: 13 AGSFMGGHAVKMIGWGTDEASGEDYWLIANSWNPSWGEGGLFRILRGVNECGIEGQIVAGE 195
AG +GGHAVKMIGWGT+ +G YW+IANSWN WGE G FRI+RG+NECGIE +VAGE
Sbjct: 137 AGKELGGHAVKMIGWGTE--NGTPYWIIANSWNSDWGENGFFRIVRGLNECGIESGVVAGE 195
BLAST of mRNA_Ecto-sp13_S_contig56552.16008.1 vs. uniprot
Match: UPI000BE597D7 (cathepsin B-like protease 2 n=1 Tax=Setaria italica TaxID=4555 RepID=UPI000BE597D7) HSP 1 Score: 95.9 bits (237), Expect = 7.240e-23 Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 1
Query: 16 GSFMGGHAVKMIGWGTDEASGEDYWLIANSWNPSWGEGGLFRILRGVNECGIEGQIVAG 192
G MGGHAVK+IGWGT +A GEDYWL+AN WN WG+ G F+I+RGVNECGIE +VAG
Sbjct: 157 GGIMGGHAVKLIGWGTSDA-GEDYWLLANQWNRGWGDDGYFKIIRGVNECGIEEDVVAG 214 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56552.16008.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig56552.16008.1 >prot_Ecto-sp13_S_contig56552.16008.1 ID=prot_Ecto-sp13_S_contig56552.16008.1|Name=mRNA_Ecto-sp13_S_contig56552.16008.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=67bp MPKYAGSFMGGHAVKMIGWGTDEASGEDYWLIANSWNPSWGEGGLFRILRback to top mRNA from alignment at Ecto-sp13_S_contig56552:648..848+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig56552.16008.1 ID=mRNA_Ecto-sp13_S_contig56552.16008.1|Name=mRNA_Ecto-sp13_S_contig56552.16008.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=201bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56552:648..848+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig56552:648..848+ >mRNA_Ecto-sp13_S_contig56552.16008.1 ID=mRNA_Ecto-sp13_S_contig56552.16008.1|Name=mRNA_Ecto-sp13_S_contig56552.16008.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=201bp|location=Sequence derived from alignment at Ecto-sp13_S_contig56552:648..848+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |