prot_Ecto-sp13_S_contig5654.16005.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5654.16005.1
Unique Nameprot_Ecto-sp13_S_contig5654.16005.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length705
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5654.16005.1 vs. uniprot
Match: D8LU64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU64_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 5.060e-50
Identity = 115/219 (52.51%), Postives = 121/219 (55.25%), Query Frame = 0 
Query:  487 NPGGGVVRAGVGACTGHIRTTRSRGVPPGAGVGGVEHLRSRKRRNCSISAGASFYRTARTPSMLPAEGTLAGMDTASLSSAAAPFTRRLKRVGVGHATVNLTGAATTAAGQKRAATCGVERTTRDLGVASPSPLGLPRTSSTLARLMQQGGGKEAPGFDAALRASAASSDGNAG-VEVAAVADAIDVGDDDKSSSSDGGAAHEDLSAWLHSTHDWWTSD 704
            NP GGVVRAGVGACTGH+RTTRSRGVPPGAG+GGVEHLRSRKRR+ SISAGASF                                                                                         +RLMQQGGGKEAPGFDAA+RASAASSDGN G VEVAAVADA+D GDDDK    DGGAAHEDLSAWLHSTHDWWTSD
Sbjct:    3 NPDGGVVRAGVGACTGHVRTTRSRGVPPGAGMGGVEHLRSRKRRSGSISAGASF-----------------------------------------------------------------------------------------SRLMQQGGGKEAPGFDAAVRASAASSDGNTGGVEVAAVADAVDAGDDDKXXXXDGGAAHEDLSAWLHSTHDWWTSD 132
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BLAST of mRNA_Ecto-sp13_S_contig5654.16005.1 vs. uniprot
Match: A0A6H5KGC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC1_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.320e-19
Identity = 53/75 (70.67%), Postives = 56/75 (74.67%), Query Frame = 0 
Query:  633 MQQGGGKEAPGFDAALRASAASSDGNA---GVEVAAVADAIDVGDDDKSSSSDGGAAHEDLSAWLHSTHDWWTSD 704
            MQ+GGGK+APGFDAA+RASAASSDGNA           DAIDVGD       D GAAHEDLSAWLHSTHDWWTSD
Sbjct:    1 MQEGGGKKAPGFDAAVRASAASSDGNARXXXXXXXXXPDAIDVGDXXXXXXXDEGAAHEDLSAWLHSTHDWWTSD 75
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5654.16005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LU64_ECTSI5.060e-5052.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGC1_9PHAE1.320e-1970.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5654contigEcto-sp13_S_contig5654:5923..8319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5654.16005.1mRNA_Ecto-sp13_S_contig5654.16005.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5654 5111..8456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5654.16005.1 ID=prot_Ecto-sp13_S_contig5654.16005.1|Name=mRNA_Ecto-sp13_S_contig5654.16005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=705bp
MAERLPSRTEIRMSIGFMNNTTTTDTPSSPEAVFDHAIAIAEERSAGGGR
QPCPQQRRSTRGVNAVHLLPGPYNNASAFGANELAPRPSTSRARGTRQVN
EEHRDGHTFGTSWPTATDIPAARDAAAAGAWAGQDGFHTPTGSRFFGDST
PANNWVRFAWEPLPGGTQYGATAVVFPPDPAAAGGGNSDGSVAGGTTGTT
MLLPLDELWEGPADRNSDESSVCVKRFRPEAGQNSIIGGRRYEGGEKHMD
WTKTPSGSSRRRCLPGLEQFAVAGATRQAARTPQPSLHARPRTSRTITEA
AGRTGTEHRPLPAADERTRRGCGPGGGNIRSSSWGGDVAMDPTRQEEVMV
SQQVQWASRGTAATNYRSQHQQQQQEEQEQQGYVQERYSSDSHETGRSAK
KPRHHRLRVQRVLSAGHMDSLADGVSSLGVASPDAAAAGSGSSSGGWNQA
DAPRTPHGCTWRRDSFGGQTDGSPQTLCPVSALGRSNPGGGVVRAGVGAC
TGHIRTTRSRGVPPGAGVGGVEHLRSRKRRNCSISAGASFYRTARTPSML
PAEGTLAGMDTASLSSAAAPFTRRLKRVGVGHATVNLTGAATTAAGQKRA
ATCGVERTTRDLGVASPSPLGLPRTSSTLARLMQQGGGKEAPGFDAALRA
SAASSDGNAGVEVAAVADAIDVGDDDKSSSSDGGAAHEDLSAWLHSTHDW
WTSD*
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