mRNA_Ecto-sp13_S_contig565.15997.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig565.15997.1 vs. uniprot
Match: D8LJL1_ECTSI (6-phosphogluconate dehydrogenase NAD-binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL1_ECTSI) HSP 1 Score: 598 bits (1543), Expect = 4.600e-212 Identity = 317/340 (93.24%), Postives = 323/340 (95.00%), Query Frame = 1
Query: 1 MLRVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKIMADKIIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKEKHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAKLKALLGASWGHRRGLREGKQKVRMLDQVLGDLLKVEEAGDDVEVLRRSLAPIRTLGKDAAILARAAAESGASSSLLESAQAQIDETVRSGYSDCSFASLATTIEEEFCDAVDREGGPR 1020
MLRVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSK+MADKIIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGK +HLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVI NTVAACEAYVLARRLGL D KLKALLGASWGH + MLDQVLGDLLKVEEAGDDVEVLRRSLAPIRTLGKDAAILARAAAESGASSSLLESAQAQIDETVRSGYSDCSFAS+ATTIEEEFC+AVD+EG PR
Sbjct: 1 MLRVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKVMADKIIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKGEHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVIINTVAACEAYVLARRLGLSDMGKLKALLGASWGHSQ----------MLDQVLGDLLKVEEAGDDVEVLRRSLAPIRTLGKDAAILARAAAESGASSSLLESAQAQIDETVRSGYSDCSFASVATTIEEEFCEAVDKEGDPR 330
BLAST of mRNA_Ecto-sp13_S_contig565.15997.1 vs. uniprot
Match: A0A6H5JLP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP7_9PHAE) HSP 1 Score: 453 bits (1165), Expect = 3.870e-156 Identity = 231/236 (97.88%), Postives = 234/236 (99.15%), Query Frame = 1
Query: 1 MLRVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKIMADKIIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKEKHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAKLKALLGASWGHRRG 708
MLRVGVVGLGRMGSGMALNVAKAGFPLAIYD EEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSK+MADKIIVDHGTVSPSFA+SMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKE+HLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAKLKALL ASWGHRRG
Sbjct: 1 MLRVGVVGLGRMGSGMALNVAKAGFPLAIYDTEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKVMADKIIVDHGTVSPSFAKSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKEEHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAKLKALLEASWGHRRG 236
BLAST of mRNA_Ecto-sp13_S_contig565.15997.1 vs. uniprot
Match: A0A6H5JM96_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM96_9PHAE) HSP 1 Score: 166 bits (420), Expect = 2.440e-45 Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 1
Query: 700 RRGLREGKQK------VRMLDQVLGDLLKVEEAGDDVEVLRRSLAPIRTLGKDAAILARAAAESGASSSLLESAQAQIDETVRSGYSDCSFASLATTIEEEFCDAVDREGGPR 1020
R+G++ G + +RMLDQVLGDLLKVEEAGDDVEVLRRSLAPIRTL KDA ILARAAAESGASSSLLESA+AQIDETVRSGYSDCSFAS+ATTIEEEFCDA D+EG PR
Sbjct: 58 RKGVKVGDTETSVSGMLRMLDQVLGDLLKVEEAGDDVEVLRRSLAPIRTLRKDAGILARAAAESGASSSLLESARAQIDETVRSGYSDCSFASVATTIEEEFCDAADKEGDPR 170
BLAST of mRNA_Ecto-sp13_S_contig565.15997.1 vs. uniprot
Match: A0A2D8MY99_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D8MY99_9BACT) HSP 1 Score: 164 bits (416), Expect = 2.990e-43 Identity = 115/311 (36.98%), Postives = 171/311 (54.98%), Query Frame = 1
Query: 4 LRVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKIMADKIIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKEKHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAKLKALLGASWGHRRGLREGKQKVRMLDQVLGDLLKVE---EAGDDVEVLRRSLAPIRTLGKDAAILARAA-AESGASSSLLESAQAQIDET 924
++VG GLG MG GMA NV +AGF L +Y+ + + L V +E+P ++ A+D+ L C+ + E E+G+LA + +A KI VDHGTV +R++ A ++ G AFLDAPISGGP+GA GTL+IM GG + + PV EAMGS++ HMG GAG A KL NQ LV N++A CEA +AR +G+ D +L+ +L ++WG R ML++ G ++ E E G + + + L+ I LGKD+ + +AA A G L+++ ++ D T
Sbjct: 1 MKVGFAGLGNMGGGMARNVLQAGFELLVYNRTRSKAEALAGAEV-------------------METPRELARAADIILTCLADIAVTRELFLEEEGILA---EAVAGKIFVDHGTVDLDTSRALHAACLERGAAFLDAPISGGPEGASAGTLAIMAGGDREVFERARPVFEAMGSKVVHMGPAGAGTATKLANQLLVGVNSLACCEALTMARGVGV-DLEQLQDVLASAWGQSR----------MLERC-GPIIAREGYDEPGAPLRNILKDLSIITRLGKDSGLSVKAADAALGVYQGLVDAGMSESDMT 277
BLAST of mRNA_Ecto-sp13_S_contig565.15997.1 vs. uniprot
Match: A0A356FFG8_9BACT (2-hydroxy-3-oxopropionate reductase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356FFG8_9BACT) HSP 1 Score: 161 bits (407), Expect = 5.900e-42 Identity = 118/327 (36.09%), Postives = 171/327 (52.29%), Query Frame = 1
Query: 4 LRVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKIMADKIIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKEKHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAKLKALLGASWGHRRGLREGKQKVRMLDQVLGDLLKVEEAGDDVEVLRRSLAPIRTLGKDAAILARAAAESGASSSLLESAQAQIDETVRSGYSDCSFASLATTIEEE 984
++VG GLG MG GMA NV +AGF L +Y+ + + L EG V ++++P D++ +D+ LVC+ E GE+G++ + KI VDHGTV + +R + A G FLDAPISGGP+GA GTL+IM GG+ + PV +AMGS++ HMG GAG AAKL NQ +V N++A CEA +AR++G D KL+ LL +WG R ML++ G ++ E D+ AP+R + KD +I+ R ESG S E+A + V +G S+ + + E
Sbjct: 1 MKVGFAGLGNMGGGMARNVLQAGFELFVYNRTRVKAEAL-EGAV------------------IMDAPRDLVREADLVLVCLADIASGREFFLGEEGVV---DDSVEGKIFVDHGTVDLATSRDLHAACGAQGAGFLDAPISGGPEGASAGTLAIMAGGEPDIFERARPVFDAMGSKVVHMGPAGAGTAAKLANQLMVGVNSLACCEALTMARQVG-ADLEKLQDLLANAWGQSR----------MLERC-GPII-AREGYDEPG------APLRNILKDLSIITRQGKESGLSVRAAEAAFGVYQQLVDAGLSESDMTAACRCVSGE 286
BLAST of mRNA_Ecto-sp13_S_contig565.15997.1 vs. uniprot
Match: A0A7C5A1E3_9CHLR (NAD(P)-dependent oxidoreductase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5A1E3_9CHLR) HSP 1 Score: 153 bits (386), Expect = 8.400e-39 Identity = 90/222 (40.54%), Postives = 128/222 (57.66%), Query Frame = 1
Query: 1 MLRVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKIMADKIIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKEKHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAK 666
M +VG +GLG MG GMA N+ KAGFPL +++ + + L K ++PAD+ SD+ L+CV + GE+G+LA + A +++D T+SP R +++ + G A LDAP+SGG +GA GTLSIMVGG+ K ++ +PV EAMG +I H+G GAG KLVNQ LV+ N +A CEA + A+ G+ DTAK
Sbjct: 2 MEQVGFIGLGIMGQGMAHNILKAGFPLTVWNRTASKAEPLLAAGAKAG-----------------QNPADIAAHSDIVLICVSDTPDVENVILGENGVLA---GVKAGSLVIDCSTISPIATRKLAEKLAAAGAAMLDAPVSGGSEGAARGTLSIMVGGETKDVERAMPVFEAMGKKITHVGPVGAGQTVKLVNQILVVGNCLAMCEALLFAQAGGV-DTAK 202
BLAST of mRNA_Ecto-sp13_S_contig565.15997.1 vs. uniprot
Match: A0A5N9B005_9CHLR (NAD(P)-dependent oxidoreductase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A5N9B005_9CHLR) HSP 1 Score: 148 bits (374), Expect = 3.180e-37 Identity = 94/231 (40.69%), Postives = 130/231 (56.28%), Query Frame = 1
Query: 4 LRVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKIMADKIIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKEKHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAKLKALLGASWG 696
+RVG +GLG MG+GMA N+ KAG+ + ++ RT + E K G ++ SP +V D+ + C+ EQ S + L+ S +I VDHGTVSP +R+M ++ I FLDAPISGGP GA +GTL+IMVGG E PV E+MG + HMG GAGA K++NQ LV N +A+CEA++LA + G+ D KL +L +WG
Sbjct: 1 MRVGYIGLGNMGNGMASNLVKAGYEVFVWS----RTSKKVEAMEKK-------GAVAC------SSPIEVASKVDIVMACLIDEQASRNIFLEKYALI---SNAREGQIFVDHGTVSPDLSRTMYESAINKNAHFLDAPISGGPDGAAKGTLAIMVGGDEDPFNYAKPVFESMGKTVSHMGKSGAGAVTKIINQLLVGVNGMASCEAFLLASKAGV-DLNKLWGILQGAWG 210
BLAST of mRNA_Ecto-sp13_S_contig565.15997.1 vs. uniprot
Match: A0A7C7KWK6_9BACT (2-hydroxy-3-oxopropionate reductase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C7KWK6_9BACT) HSP 1 Score: 147 bits (372), Expect = 7.480e-37 Identity = 84/221 (38.01%), Postives = 124/221 (56.11%), Query Frame = 1
Query: 7 RVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKIMADKIIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKEKHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAKL 669
R+G +GLG MG MA N+ AG+PL +++ + EL E + E P DV +SDV + V + + G+DG++ + ++VD T+SP AR +++A+++ G AFLDAP+SGG +GA+EGTLSIMVGG E+ + CLP+ + +G I HMGG G G KL NQ + + N +A CE V A ++GL D K+
Sbjct: 6 RIGFIGLGIMGKPMARNLLNAGYPLTVWNRTRCKMDELVEAGAQPA-----------------ECPRDVARSSDVVITMVADSPDVQQVILGDDGVI---EGVREGMVVVDMSTISPRVARELAQALLRKGVAFLDAPVSGGQRGAIEGTLSIMVGGDERAFERCLPIFQVLGKTIVHMGGSGMGQTTKLANQIICVLNILAMCEGLVFAAKMGL-DVRKM 205
BLAST of mRNA_Ecto-sp13_S_contig565.15997.1 vs. uniprot
Match: A0A2H6H3L8_9BACT (2-hydroxy-3-oxopropionate reductase n=3 Tax=Bacteria TaxID=2 RepID=A0A2H6H3L8_9BACT) HSP 1 Score: 147 bits (371), Expect = 1.010e-36 Identity = 97/271 (35.79%), Postives = 141/271 (52.03%), Query Frame = 1
Query: 7 RVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKIMADKIIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKEKHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAKLKALLGASWGHRRGLREGKQKVR-------MLDQVLGDLLKVEEAGDDVEV 798
+VG +G+G MG+GMA N+ GF + I++ R + L E +SPADV D+ ++CV E + GE G++ + ++VDH T+SPS ++KAV + G +LDAPISGG +GA++GTL+IMVGG E ++ P +EA G+ I H+GG GAG KLVNQ LV+ N +A EA + A+ GL +KA+ G G G Q + M+D DL V E+ D++ V
Sbjct: 4 KVGFIGMGIMGAGMARNLIDDGFDVRIWNRTSSRMEPLIEAGASPA-----------------DSPADVARRCDIIMICVSDTPDVQEVVLGEFGVV---EGVEPGALVVDHSTISPSATLELAKAVEERGAHWLDAPISGGSEGAVKGTLAIMVGGDEAQVERARPFMEAYGNTITHVGGQGAGQMVKLVNQILVVINGLAVAEALIFAQAAGLDLVKTVKAVEGGGAGSWMLSNRGPQMIERDWRPGFMIDLQQKDLRLVLESADEIGV 254
BLAST of mRNA_Ecto-sp13_S_contig565.15997.1 vs. uniprot
Match: A0A7C4Q8Q6_9CHLR (NAD(P)-dependent oxidoreductase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C4Q8Q6_9CHLR) HSP 1 Score: 146 bits (369), Expect = 2.310e-36 Identity = 102/271 (37.64%), Postives = 142/271 (52.40%), Query Frame = 1
Query: 10 VGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLL-AVGSKIMADKIIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKEKHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAKLKALLGASWGHRRGLREGKQKVR-------MLDQVLGDLLKVEEAGDDVEV 798
+G +GLG MG GMA N+ KAG+P+ +++ R EL D +PT SPAD+ S V + CV L G +G AV + A +++D T+SP R M+ + + G A LDAP+SGG +GA GTLSIMVGG+ + + LPVL+AMG I H+GG+GAG AKLVNQ LV+ N +A EA + A+ GL L+A+ + G G Q + M+D DL V +A D++ V
Sbjct: 5 IGFIGLGIMGRGMARNLLKAGYPVRVWNRTAARMDEL----AADGAVPTA-------------SPADLAAQSTVIITCVSDTPDVEAVLLGAEGAPPAVIDGVRAGALVIDMSTISPQATRRMAARLAEKGAAMLDAPVSGGSEGAARGTLSIMVGGQAEAVARALPVLQAMGKTITHIGGHGAGQMAKLVNQVLVVVNMLAVGEALLFAQAGGLDLHKTLEAVKNGAAGSWMLSNRGPQVLARDWRPGFMIDLQEKDLRLVLQAADELAV 258 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig565.15997.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig565.15997.1 >prot_Ecto-sp13_S_contig565.15997.1 ID=prot_Ecto-sp13_S_contig565.15997.1|Name=mRNA_Ecto-sp13_S_contig565.15997.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=341bp MLRVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLback to top mRNA from alignment at Ecto-sp13_S_contig565:7831..16258+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig565.15997.1 ID=mRNA_Ecto-sp13_S_contig565.15997.1|Name=mRNA_Ecto-sp13_S_contig565.15997.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8428bp|location=Sequence derived from alignment at Ecto-sp13_S_contig565:7831..16258+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig565:7831..16258+ >mRNA_Ecto-sp13_S_contig565.15997.1 ID=mRNA_Ecto-sp13_S_contig565.15997.1|Name=mRNA_Ecto-sp13_S_contig565.15997.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1023bp|location=Sequence derived from alignment at Ecto-sp13_S_contig565:7831..16258+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |