prot_Ecto-sp13_S_contig5643.15989.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5643.15989.1
Unique Nameprot_Ecto-sp13_S_contig5643.15989.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length317
Homology
BLAST of mRNA_Ecto-sp13_S_contig5643.15989.1 vs. uniprot
Match: D8LJP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP2_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 2.590e-104
Identity = 169/181 (93.37%), Postives = 172/181 (95.03%), Query Frame = 0
Query:  137 GGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNKRLVDIMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAYEAKSAGSAVVEXXXXXXXXXXMTKSRGGGRAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVS 317
            GGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNKRLV +MGSWTEGLVGVSLIAIGLLGLKESLLDYEETPA+EAKSAGSAVVE XXXXXXXXX     G  RAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMV+
Sbjct:    8 GGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNKRLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGXXXXXXXXXXXXXXGE-RAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVA 187          
BLAST of mRNA_Ecto-sp13_S_contig5643.15989.1 vs. uniprot
Match: A0A835YVB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB1_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.260e-67
Identity = 117/185 (63.24%), Postives = 137/185 (74.05%), Query Frame = 0
Query:  135 VGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRL--GLGHNKRLVDIMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAYEAKSAGSAVVEXXXXXXXXXXMTKSRGGGRAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVS 317
            +GGGVLAGGLHA+SGPDHLAALLPRIMG+ W  +MRIGA WGLGHGFSAT+IGLAAFF KDR+  G G   R +  +G++TE LVGVSLI IGL+GLKESLLD    P  +  +A ++ +             K  GG RAIF NG+LHGFSWDGAPSLAPALA ++W  VLWFLLAYC GTM +
Sbjct:    1 MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLD---KPHEDDAAAAASEISGEKSP------AKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAA 176          
BLAST of mRNA_Ecto-sp13_S_contig5643.15989.1 vs. uniprot
Match: A0A4D9DEM4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEM4_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.080e-53
Identity = 99/190 (52.11%), Postives = 127/190 (66.84%), Query Frame = 0
Query:  131 AFAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNKRLVDIMGSWTEGLVGVSLIAIGLLGLKESL-LDYEETPAYEAKS--AGSAVVEXXXXXXXXXXMTKSRGGGRAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVS 317
            AF+ + GG+LAG LHAV+GPDHLAALLPR +G++W+++MRIGA WGLGHG SA ++G+ AFF K RL    +  L+  +  +TE L+GVSLI IGLLGLKE+   D       EA+   AGSA               K +  G+A+F NG+LHGFSWDG P+LAPALA  SW  V+ FL +Y  GTM+S
Sbjct:    9 AFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHNTLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSIAGSAA----------SGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLS 188          
BLAST of mRNA_Ecto-sp13_S_contig5643.15989.1 vs. uniprot
Match: A0A7S2Y0T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T2_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.430e-53
Identity = 102/200 (51.00%), Postives = 133/200 (66.50%), Query Frame = 0
Query:  119 RRLAFAAMANAAAFAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNKRLVDIMGSWTEGLVGVSLIAIGLLGLKESL-LDYEETPAYEAKSAGSAVVEXXXXXXXXXXMTKSRGGGRAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVS 317
            R LA  AMA+AA+ A+VGGGVL+G LHA+SGPDHLAA++PR +G++W  SM++GA WGLGHG S  ++GL AF  KD+L L +   ++  + +WTE LVG+SLI IG LG+KES   D ++  A E     S                K  G  ++IFFNG+LHG SWDG PSLAPALA ++W  V+ FL AYC G +VS
Sbjct:   77 RPLATVAMASAASLASVGGGVLSGSLHAISGPDHLAAVVPRCIGKRWWISMQVGALWGLGHGVSGLMMGLFAFLVKDKLNL-NKSPMISNLSTWTEILVGLSLILIGFLGVKESRSFDSDKAAAKEKLEQESG---------------KKTGSFKSIFFNGLLHGLSWDGTPSLAPALAFTTWRPVVGFLSAYCWGVVVS 260          
BLAST of mRNA_Ecto-sp13_S_contig5643.15989.1 vs. uniprot
Match: W7TPT7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT7_9STRA)

HSP 1 Score: 182 bits (462), Expect = 2.670e-51
Identity = 94/187 (50.27%), Postives = 126/187 (67.38%), Query Frame = 0
Query:  131 AFAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNKRLVDIMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAYEAKSAGSAVVEXXXXXXXXXXMTKSRGGGRAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVS 317
            AF+ + GG+LAG LHAV+GPDHLAALLPR +G++W+++MRIGA WGLGHG SA ++G+ AFF K RL    +  L+  +  +TE L+GVSLI IGLLGLKE+   ++ +     ++ GS                K +  G+A+F NG+LHGFSWDG P+LAPALA  SW  V+ FL +Y  GTM+S
Sbjct:  133 AFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAA-HFDVSAVMPLEAEGSIT------GSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLS 312          
BLAST of mRNA_Ecto-sp13_S_contig5643.15989.1 vs. uniprot
Match: A0A7R9ZBQ6_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBQ6_9STRA)

HSP 1 Score: 169 bits (428), Expect = 7.950e-47
Identity = 93/183 (50.82%), Postives = 118/183 (64.48%), Query Frame = 0
Query:  134 AVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLG-LGHNKRLVDIMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAYEAKSAGSAVVEXXXXXXXXXXMTKSRGGGRAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTM 315
            AV GGV AGGLHA++GPDHLAALLPR  GQ+W+++ RIGA WG+GHG SAT++G+ AF  K R+  +G   R+V    S+ E  VG SL+ IGLLG+KE+     E      +S  +A  E                  RA+ FNGVLHGFSWDGAPSLAPA+A+++W   + FLLAY  GTM
Sbjct:   87 AVSGGVFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRIGALWGMGHGVSATILGVCAFALKSRMSKMGAFSRVVRGASSFMEIAVGASLVFIGLLGIKEAREWEAEIEGGVPQSLSAAAGEDGMKVAQK----------RAVVFNGVLHGFSWDGAPSLAPAIAVATWRGNITFLLAYALGTM 259          
BLAST of mRNA_Ecto-sp13_S_contig5643.15989.1 vs. uniprot
Match: A0A7S1D180_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D180_CYCTE)

HSP 1 Score: 166 bits (421), Expect = 1.690e-46
Identity = 94/179 (52.51%), Postives = 122/179 (68.16%), Query Frame = 0
Query:  126 MANAAAFA---AVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRL-GLGHNKRLVDIMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAYEAKSAGSAVVEXXXXXXXXXXMTKSRGGGRAIFFNGVLHGFSWDGAPSLAPALALSSW 300
            MANA A A   A+ GG  AGGLHA+SGPDHLAALLPR +GQ+W+KS R+GA WG+GHG SAT++G+ A+F K RL G+   K L+    S TE  VG+SL+ IGL+G KE+  +++   A  + SA +A  +           T  R   RA+ FNG+LHGFSWDGAPSLAPALA+++W
Sbjct:   84 MANAPAIAIITALVGGFAAGGLHAISGPDHLAALLPRCVGQRWYKSFRVGALWGMGHGVSATILGVMAYFLKSRLAGMTGVKSLLHRASSVTEVAVGLSLVVIGLMGFKEAR-EWDNNEAAMSLSAAAAPQD-----------TVIREQNRAVVFNGLLHGFSWDGAPSLAPALAVATW 250          
BLAST of mRNA_Ecto-sp13_S_contig5643.15989.1 vs. uniprot
Match: A0A7S4J5D2_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5D2_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.050e-46
Identity = 90/185 (48.65%), Postives = 119/185 (64.32%), Query Frame = 0
Query:  134 AVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLG-LGHNKRLVDIMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAYEAKSAGSAVVEXXXXXXXXXXMTKSRGGGRAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVS 317
            A+ GGV AGGLHA++GPDHLAALLPR  GQ+W+++ RIGA WG+GHG SAT++G+ AF  K+R+  +G    +V    ++ E  VG SL+ IGLLG+KE+     E      +S  +A  E                  RA+ FNGVLHGFSWDGAPSLAPA+A+++W   + FLLAY  GTM +
Sbjct:   84 AISGGVFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRIGALWGMGHGVSATILGVCAFALKNRMSKMGAFSNIVHGASAFMEVAVGASLVFIGLLGIKEAREWEAEIEGGSPQSLSAAAGEDGVKVAQK----------RAVVFNGVLHGFSWDGAPSLAPAVAVATWRGNITFLLAYALGTMAA 258          
BLAST of mRNA_Ecto-sp13_S_contig5643.15989.1 vs. uniprot
Match: A0A0G4EAE2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EAE2_VITBC)

HSP 1 Score: 170 bits (430), Expect = 9.430e-46
Identity = 96/196 (48.98%), Postives = 125/196 (63.78%), Query Frame = 0
Query:  129 AAAFAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRL------GLGHNKRLVDIMGSWTEGLVGVSLIAIGLLGLKESLL-DYEETPAYEAKSAGSAVVEXXXXXXXXXXMTKSRGGGRAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVS 317
            AA+   VGGG LAG LHAVSGPDHLAALLP+ +G++W  + ++G  WGLGHG SA ++G+ AF  KDR+      GL H   L++ M +WTEGLVG+SLI IG  G KE+   D EE  A     A     E          ++ S   G  +FFNG+LHGFS DGAP LAP+L+ + W +V  FLL+YC+GTM++
Sbjct:  207 AASIVTVGGGALAGSLHAVSGPDHLAALLPQCLGRRWTGAGKLGLVWGLGHGLSAMIMGMLAFVLKDRIFVMDAAGL-HGGALIERMETWTEGLVGLSLILIGFFGYKEARSWDAEELQAQLDARAKEEQKEGYRD------LSASLRRGLTLFFNGMLHGFSLDGAPGLAPSLSFTRWPAVFLFLLSYCTGTMLT 395          
BLAST of mRNA_Ecto-sp13_S_contig5643.15989.1 vs. uniprot
Match: B7G7I3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7I3_PHATC)

HSP 1 Score: 166 bits (419), Expect = 1.670e-45
Identity = 95/214 (44.39%), Postives = 130/214 (60.75%), Query Frame = 0
Query:  107 TMGLRVLAPGGGRRLAFAAMANAAAFAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNKRLVDIMGSWT---EGLVGVSLIAIGLLGLKESLLDYEETPAYEAKSAGSAVVEXXXXXXXXXXMTKSRGGGRAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVS 317
            T  L ++AP G        +A AA   A+ GG+ AGGLHA++GPDHLAALLPR  GQ+W+++ R+GA WG+GHG SAT+IG+AAF  K+        RL  ++   T   E  VG+SLI IG++G++E+    +E    + +S  SA  +                  RA+ FNG+LHGFSWDGAPSLAPALA+++W   L FL +Y  GTM +
Sbjct:   65 TTSLAMVAPAG--------VAVAAITGAMTGGLFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRVGALWGMGHGVSATIIGVAAFGLKNTFKNSMGSRLQTLVAGATHVTEIAVGLSLILIGMMGIREAREWEDELDGVQPQSLSSAAADAGIKTAQK----------RAVVFNGLLHGFSWDGAPSLAPALAVATWSGNLAFLFSYAVGTMTT 260          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5643.15989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJP2_ECTSI2.590e-10493.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YVB1_9STRA1.260e-6763.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DEM4_9STRA1.080e-5352.11Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2Y0T2_9STRA8.430e-5351.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TPT7_9STRA2.670e-5150.27Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7R9ZBQ6_9STRA7.950e-4750.82Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]
A0A7S1D180_CYCTE1.690e-4652.51Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S4J5D2_9STRA2.050e-4648.65Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A0G4EAE2_VITBC9.430e-4648.98Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
B7G7I3_PHATC1.670e-4544.39Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33876FAMILY NOT NAMEDcoord: 52..317
NoneNo IPR availablePANTHERPTHR33876:SF4EXPRESSED PROTEINcoord: 52..317
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 230..290
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 312..317
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 194..204
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 205..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 291..311
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.606
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 205..227
NoneNo IPR availableTMHMMTMhelixcoord: 171..193
NoneNo IPR availableTMHMMTMhelixcoord: 291..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5643contigEcto-sp13_S_contig5643:4098..8188 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5643.15989.1mRNA_Ecto-sp13_S_contig5643.15989.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5643 3534..8188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5643.15989.1 ID=prot_Ecto-sp13_S_contig5643.15989.1|Name=mRNA_Ecto-sp13_S_contig5643.15989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=317bp
MVVAVARALAAGVALALATRARGFVAPAAVTTMTGARAARPCSNRWPCSR
AHSSTQQQQQHQGVAFAPTSQFLGCAGRGRRRIAAEGCVSSAAGCSAAAG
AVSTMPTMGLRVLAPGGGRRLAFAAMANAAAFAAVGGGVLAGGLHAVSGP
DHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLG
HNKRLVDIMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAYEAKSAGSA
VVEGGGGVPGGGGMTKSRGGGRAIFFNGVLHGFSWDGAPSLAPALALSSW
GSVLWFLLAYCSGTMVS
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