prot_Ecto-sp13_S_contig564.15983.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig564.15983.1
Unique Nameprot_Ecto-sp13_S_contig564.15983.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length306
Homology
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BLAST of mRNA_Ecto-sp13_S_contig564.15983.1 vs. uniprot
Match: D8LUA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA9_ECTSI)

HSP 1 Score: 444 bits (1142), Expect = 6.010e-148
Identity = 247/306 (80.72%), Postives = 257/306 (83.99%), Query Frame = 0 
Query:    1 MGSSGSNTTATAAAATAGASVALLPRAQPPGERENAGLSRGTVAAXXXXXXTGGGAREYTTVSVAPDTGDSVRAFEYGVDSESRDDSSGNNHGSPQEREGLDVEEEGKEGDDVKRPAEEWGRGGGWSXXXXXLVLGGNYQQLRYVMNIPSLRAQKDGGSSEDFTRSPLEVLIKREPKPLLENMTVLHRAGYVCSDSDSGDINDNDTETSSRFFSHRKRVSSSNVSSMGRRVSDTFREQVRWVSQHLAKTTKLAMDVTKATDRIVQKPSIKAKLDLFNDLSDIYPFGSPALFHKTLHVLLLLSCTYL 306
            +GSSGSN           ASVALLPRAQPPGER + GLSRGT AA      TGGGAREYTTV VAPD GDSVRA EYGVDSESRDDSSGNN  SPQEREGLDVEEE KEGDDV RPAEEWGRGG WS      VLG +  QLRYVMNIPSLR QKDGGSS+DFTRSPLEVL+KREPKPLL++ TV HRAGYVCSDSDSGDIN +DTETSSR FSHRK +SSSNVSSMGRR S TFREQVR VSQHLA TTKLAMDVTKATDRIV+KPSIKAKLDLFNDLSDIYPFGSP LFHKTL VLLLLSCTYL
Sbjct:  502 VGSSGSNXXXXXXXXXXXASVALLPRAQPPGERADLGLSRGTAAAAAE---TGGGAREYTTVLVAPDPGDSVRASEYGVDSESRDDSSGNNRRSPQEREGLDVEEEVKEGDDVNRPAEEWGRGGSWSGGGGRQVLGDDCHQLRYVMNIPSLRTQKDGGSSKDFTRSPLEVLVKREPKPLLQDKTVSHRAGYVCSDSDSGDINGSDTETSSRSFSHRKSMSSSNVSSMGRRASHTFREQVRRVSQHLANTTKLAMDVTKATDRIVRKPSIKAKLDLFNDLSDIYPFGSPTLFHKTLDVLLLLSCTYL 804
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig564.15983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUA9_ECTSI6.010e-14880.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig564contigEcto-sp13_S_contig564:92..1418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig564.15983.1mRNA_Ecto-sp13_S_contig564.15983.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig564 92..5979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig564.15983.1 ID=prot_Ecto-sp13_S_contig564.15983.1|Name=mRNA_Ecto-sp13_S_contig564.15983.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=306bp
MGSSGSNTTATAAAATAGASVALLPRAQPPGERENAGLSRGTVAAAAAAA
ETGGGAREYTTVSVAPDTGDSVRAFEYGVDSESRDDSSGNNHGSPQEREG
LDVEEEGKEGDDVKRPAEEWGRGGGWSGGGGGLVLGGNYQQLRYVMNIPS
LRAQKDGGSSEDFTRSPLEVLIKREPKPLLENMTVLHRAGYVCSDSDSGD
INDNDTETSSRFFSHRKRVSSSNVSSMGRRVSDTFREQVRWVSQHLAKTT
KLAMDVTKATDRIVQKPSIKAKLDLFNDLSDIYPFGSPALFHKTLHVLLL
LSCTYL
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