prot_Ecto-sp13_S_contig5637.15979.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5637.15979.1
Unique Nameprot_Ecto-sp13_S_contig5637.15979.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length234
Homology
BLAST of mRNA_Ecto-sp13_S_contig5637.15979.1 vs. uniprot
Match: D7FME9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME9_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 3.080e-50
Identity = 113/238 (47.48%), Postives = 143/238 (60.08%), Query Frame = 0
Query:    3 SDDNSCGSEDGEECTEVPVTFFVIFSWMVGGLSVNWFLLIVCGARFKLIQPVTEFIECTGIVRRGSDCDRCQRALCCIFAKVMIAL-------FLCACLGPLPLAILLCWYLWRYPCRFCMNLSRQAARRKTQLAVDRLRRFPDQKMWKARGWLIMMRARRQRSSARPKGWRTRFRKLEHHDEANIIKYAMRDFMGGQTPPEIELLEAGRLKMNFVRVVMAVVEISEEGLFRHIITYL 233
            S D+SC  E+GEEC E+ +   VIF W+  G   +  L      R K       F++  GI+R  S  +R  +A+    A+ ++ L        +C  LGPLPLAILLCWY       F + + RQAAR +   AV+RLR FP Q+ W A GWLIM+RAR QR  ARPKGW  R RKLE  +EANI+          + PPE+ELLEAGR +MNFVR V AVVEI+EEGLFRHII++L
Sbjct:   81 SHDDSCSDEEGEECPEMTLLGNVIFYWVWAGFMTSLCL------RLKYSSFAKPFVDRIGILR--SVANRFGQAVRNPGARALLGLTQFCLEMVICTLLGPLPLAILLCWYFHH----FYVVVPRQAARER---AVERLRTFPGQRRWHAGGWLIMIRARHQRFLARPKGWPIRLRKLERFNEANIVH---------KIPPELELLEAGRSRMNFVRAVTAVVEINEEGLFRHIISFL 294          
BLAST of mRNA_Ecto-sp13_S_contig5637.15979.1 vs. uniprot
Match: D8LNC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC9_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 6.830e-38
Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 0
Query:  151 MMRARRQRSSARPKGWRTRFRKLEHHDEANIIKYAMRDFMGGQTPPEIELLEAGRLKMNFVRVVMAVVEISEEGLFRHIITYL 233
            MMRARRQRS AR KGW+ R RKL+H+DEANI+KYAMRDFMG QTPPEIELLEAGRLKMNFVR V A +EI EEGLFRHII+YL
Sbjct:    1 MMRARRQRSLARSKGWQARLRKLDHYDEANIMKYAMRDFMGSQTPPEIELLEAGRLKMNFVRAVTAAIEIPEEGLFRHIISYL 83          
BLAST of mRNA_Ecto-sp13_S_contig5637.15979.1 vs. uniprot
Match: D8LNB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB4_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 5.660e-37
Identity = 70/84 (83.33%), Postives = 76/84 (90.48%), Query Frame = 0
Query:  151 MMRARRQRSS-ARPKGWRTRFRKLEHHDEANIIKYAMRDFMGGQTPPEIELLEAGRLKMNFVRVVMAVVEISEEGLFRHIITYL 233
            MMRAR +RSS AR KGWR R RKLE +DEA+IIKYAMRDFMGGQTPPEIELLEAGRLKMNFVR V+AVVEI EEGLFRHI++YL
Sbjct:    1 MMRARHERSSSARSKGWRARLRKLERYDEASIIKYAMRDFMGGQTPPEIELLEAGRLKMNFVRAVIAVVEIQEEGLFRHIMSYL 84          
BLAST of mRNA_Ecto-sp13_S_contig5637.15979.1 vs. uniprot
Match: D7FMF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF1_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.120e-18
Identity = 47/83 (56.63%), Postives = 57/83 (68.67%), Query Frame = 0
Query:  151 MMRARRQRSSARPKGWRTRFRKLEHHDEANIIKYAMRDFMGGQTPPEIELLEAGRLKMNFVRVVMAVVEISEEGLFRHIITYL 233
            M+RAR QRS  R  GW  R RKLE +++ANI           + PPE+ELLEAGR +MNF R  MAVVE +EEGLFRHII++L
Sbjct:    1 MLRARHQRSLGRSTGWPVRLRKLERYNKANIFN---------KIPPELELLEAGRSRMNFARAAMAVVETNEEGLFRHIISFL 74          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5637.15979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FME9_ECTSI3.080e-5047.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNC9_ECTSI6.830e-3881.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNB4_ECTSI5.660e-3783.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMF1_ECTSI1.120e-1856.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..233
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..83
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5637contigEcto-sp13_S_contig5637:4259..7414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5637.15979.1mRNA_Ecto-sp13_S_contig5637.15979.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5637 464..7544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5637.15979.1 ID=prot_Ecto-sp13_S_contig5637.15979.1|Name=mRNA_Ecto-sp13_S_contig5637.15979.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=234bp
MSSDDNSCGSEDGEECTEVPVTFFVIFSWMVGGLSVNWFLLIVCGARFKL
IQPVTEFIECTGIVRRGSDCDRCQRALCCIFAKVMIALFLCACLGPLPLA
ILLCWYLWRYPCRFCMNLSRQAARRKTQLAVDRLRRFPDQKMWKARGWLI
MMRARRQRSSARPKGWRTRFRKLEHHDEANIIKYAMRDFMGGQTPPEIEL
LEAGRLKMNFVRVVMAVVEISEEGLFRHIITYL*
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